RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
SLC48A1-201ENST00000442218 PTPRCP08575 1304 aa15.96■□□□□ 0.15
SLC48A1-201ENST00000442218 CHMLP26374 656 aa15.96■□□□□ 0.15
SLC48A1-201ENST00000442218 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
SLC48A1-201ENST00000442218 NBPF6Q5VWK0 638 aa15.96■□□□□ 0.15
SLC48A1-201ENST00000442218 NBPF4Q96M43 638 aa15.96■□□□□ 0.15
SLC48A1-201ENST00000442218 PTMAP06454 111 aaKnown RBP15.95■□□□□ 0.14
SLC48A1-201ENST00000442218 CWC27Q6UX04 472 aaKnown RBP15.95■□□□□ 0.14
SLC48A1-201ENST00000442218 MARF1Q9Y4F3 1742 aaKnown RBP15.95■□□□□ 0.14
SLC48A1-201ENST00000442218 C17orf53Q8N3J3 647 aaPredicted RBP15.95■□□□□ 0.14
SLC48A1-201ENST00000442218 DDX17Q92841 729 aaKnown RBP15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 GNAT3A8MTJ3 354 aa15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 NBPF7P0C2Y1 421 aaPredicted RBP15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 CCT4P50991 539 aaKnown RBP15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 STRCP1A6NGW2 1772 aa15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 FLT4P35916 1363 aa15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 UBTFL1P0CB47 393 aaPredicted RBP15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 PPP1R42Q7Z4L9 355 aa15.94■□□□□ 0.14
SLC48A1-201ENST00000442218 OS9Q13438 667 aaPredicted RBP15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 PPP1R9BQ96SB3 815 aa15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 USP44Q9H0E7 712 aa15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 ISY1Q9ULR0 285 aaKnown RBP15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 SBNO1A3KN83 1393 aa15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 SRGAP3O43295 1099 aa15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 ZNF445P59923 1031 aa15.93■□□□□ 0.14
SLC48A1-201ENST00000442218 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 TSC1Q92574 1164 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 C19orf44Q9H6X5 657 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 TMEM94Q12767 1356 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 FAM177BA6PVY3 158 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 FIBPO43427 364 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 TCEANC2Q96MN5 208 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 IGSF1Q8N6C5 1336 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 PTMSP20962 102 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 RASEFQ8IZ41 740 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 CNPY2Q9Y2B0 182 aa15.92■□□□□ 0.14
SLC48A1-201ENST00000442218 COL9A3Q14050 684 aaPredicted RBP15.91■□□□□ 0.14
SLC48A1-201ENST00000442218 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
SLC48A1-201ENST00000442218 CCDC30Q5VVM6 783 aa15.91■□□□□ 0.14
SLC48A1-201ENST00000442218 USP48Q86UV5 1035 aa15.91■□□□□ 0.14
SLC48A1-201ENST00000442218 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
SLC48A1-201ENST00000442218 MCCP23508 829 aa15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 ATP8B2P98198 1209 aa15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 LRSAM1Q6UWE0 723 aa15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 CLEC17AQ6ZS10 378 aa15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
SLC48A1-201ENST00000442218 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
SLC48A1-201ENST00000442218 PROSER3Q2NL68 480 aa15.89■□□□□ 0.13
SLC48A1-201ENST00000442218 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
SLC48A1-201ENST00000442218 USP25Q9UHP3 1055 aa15.89■□□□□ 0.13
SLC48A1-201ENST00000442218 C1orf167Q5SNV9 1468 aa15.89■□□□□ 0.13
SLC48A1-201ENST00000442218 RGPD1P0DJD0 1748 aa15.89■□□□□ 0.13
SLC48A1-201ENST00000442218 LARGE1O95461 756 aa15.89■□□□□ 0.13
SLC48A1-201ENST00000442218 KIAA0232Q92628 1395 aa15.88■□□□□ 0.13
SLC48A1-201ENST00000442218 BRD1O95696 1058 aa15.88■□□□□ 0.13
SLC48A1-201ENST00000442218 GNAI3P08754 354 aa15.88■□□□□ 0.13
SLC48A1-201ENST00000442218 LMTK3Q96Q04 1460 aa15.88■□□□□ 0.13
SLC48A1-201ENST00000442218 DNTTIP2Q5QJE6 756 aaKnown RBP15.88■□□□□ 0.13
SLC48A1-201ENST00000442218 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
SLC48A1-201ENST00000442218 ATF3P18847 181 aa15.87■□□□□ 0.13
SLC48A1-201ENST00000442218 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
SLC48A1-201ENST00000442218 SRCIN1Q9C0H9 1055 aa15.87■□□□□ 0.13
SLC48A1-201ENST00000442218 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
SLC48A1-201ENST00000442218 KRT28Q7Z3Y7 464 aa15.87■□□□□ 0.13
SLC48A1-201ENST00000442218 FERMT3Q86UX7 667 aa15.87■□□□□ 0.13
SLC48A1-201ENST00000442218 NECAB1Q8N987 351 aa15.87■□□□□ 0.13
SLC48A1-201ENST00000442218 HCLS1P14317 486 aaPredicted RBP15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 CCDC83Q8IWF9 413 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 AK2P54819 239 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 RHPN1Q8TCX5 695 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 SIL1Q9H173 461 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 SALL3Q9BXA9 1300 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 PPFIA3O75145 1194 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 OSBPL3Q9H4L5 887 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 TTC12Q9H892 705 aaPredicted RBP15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 AXIN2Q9Y2T1 843 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 ARHGEF10O15013 1369 aa15.86■□□□□ 0.13
SLC48A1-201ENST00000442218 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 UQCRHLA0A096LP55 91 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 OFD1O75665 1012 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 UQCRHP07919 91 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 CWF19L2Q2TBE0 894 aaKnown RBP15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 ADCK5Q3MIX3 580 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 TCHHQ07283 1943 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 VPS37CA5D8V6 355 aaPredicted RBP15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 KLHDC4Q8TBB5 520 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 TSPY26PQ9H489 355 aa15.85■□□□□ 0.13
SLC48A1-201ENST00000442218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms