RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TRIM37O94972 964 aa26.98■■□□□ 1.91
VPS13B-204ENST00000441350 DNAJC10Q8IXB1 793 aa26.98■■□□□ 1.91
VPS13B-204ENST00000441350 FRAT1Q92837 279 aaPredicted RBP26.98■■□□□ 1.91
VPS13B-204ENST00000441350 DBF4Q9UBU7 674 aaPredicted RBP26.98■■□□□ 1.91
VPS13B-204ENST00000441350 PDIA6Q15084 440 aa26.96■■□□□ 1.91
VPS13B-204ENST00000441350 IPO8O15397 1037 aaKnown RBP26.95■■□□□ 1.91
VPS13B-204ENST00000441350 ZKSCAN2Q63HK3 967 aa26.95■■□□□ 1.91
VPS13B-204ENST00000441350 ARHGAP45Q92619 1136 aa26.95■■□□□ 1.91
VPS13B-204ENST00000441350 DDX21Q9NR30 783 aaKnown RBP eCLIP26.95■■□□□ 1.91
VPS13B-204ENST00000441350 LY75O60449 1722 aa26.95■■□□□ 1.9
VPS13B-204ENST00000441350 ERBB4Q15303 1308 aa26.95■■□□□ 1.9
VPS13B-204ENST00000441350 G2E3Q7L622 706 aa26.94■■□□□ 1.9
VPS13B-204ENST00000441350 CANXP27824 592 aaKnown RBP26.94■■□□□ 1.9
VPS13B-204ENST00000441350 ATP6V1AP38606 617 aa26.94■■□□□ 1.9
VPS13B-204ENST00000441350 PROSER3Q2NL68 480 aa26.94■■□□□ 1.9
VPS13B-204ENST00000441350 STARD3NLO95772 234 aa26.93■■□□□ 1.9
VPS13B-204ENST00000441350 ATF7IPQ6VMQ6 1270 aa26.93■■□□□ 1.9
VPS13B-204ENST00000441350 ANXA1P04083 346 aa26.92■■□□□ 1.9
VPS13B-204ENST00000441350 CYP19A1P11511 503 aaPredicted RBP26.92■■□□□ 1.9
VPS13B-204ENST00000441350 TRIM27P14373 513 aa26.92■■□□□ 1.9
VPS13B-204ENST00000441350 ITPK1Q13572 414 aa26.92■■□□□ 1.9
VPS13B-204ENST00000441350 PDE3AQ14432 1141 aa26.92■■□□□ 1.9
VPS13B-204ENST00000441350 HYPKQ9NX55 129 aa26.92■■□□□ 1.9
VPS13B-204ENST00000441350 PTPRCP08575 1304 aa26.92■■□□□ 1.9
VPS13B-204ENST00000441350 C20orf194Q5TEA3 1177 aa26.91■■□□□ 1.9
VPS13B-204ENST00000441350 LRP10Q7Z4F1 713 aa26.91■■□□□ 1.9
VPS13B-204ENST00000441350 NBPF26B4DH59 902 aa26.9■■□□□ 1.9
VPS13B-204ENST00000441350 FLIIQ13045 1269 aa26.9■■□□□ 1.9
VPS13B-204ENST00000441350 NBPF14Q5TI25 921 aa26.9■■□□□ 1.9
VPS13B-204ENST00000441350 NBPF10Q6P3W6 841 aaKnown RBP26.9■■□□□ 1.9
VPS13B-204ENST00000441350 NBPF15Q8N660 670 aa26.9■■□□□ 1.9
VPS13B-204ENST00000441350 TNNQ9UQP3 1299 aa26.9■■□□□ 1.9
VPS13B-204ENST00000441350 A1BGP04217 495 aa26.9■■□□□ 1.9
VPS13B-204ENST00000441350 NEFLP07196 543 aa26.9■■□□□ 1.9
VPS13B-204ENST00000441350 PHAXQ9H814 394 aaKnown RBP26.9■■□□□ 1.9
VPS13B-204ENST00000441350 COL5A3P25940 1745 aaPredicted RBP26.89■■□□□ 1.9
VPS13B-204ENST00000441350 IRX6P78412 446 aaPredicted RBP26.89■■□□□ 1.9
VPS13B-204ENST00000441350 API5Q9BZZ5 524 aaKnown RBP26.88■■□□□ 1.89
VPS13B-204ENST00000441350 TNS1Q9HBL0 1735 aaKnown RBP26.87■■□□□ 1.89
VPS13B-204ENST00000441350 MS4A1P11836 297 aa26.87■■□□□ 1.89
VPS13B-204ENST00000441350 MYL6BP14649 208 aa26.87■■□□□ 1.89
VPS13B-204ENST00000441350 PIP4K2AP48426 406 aaPredicted RBP26.87■■□□□ 1.89
VPS13B-204ENST00000441350 DZIP1LQ8IYY4 767 aaKnown RBP26.87■■□□□ 1.89
VPS13B-204ENST00000441350 RREB1Q92766 1687 aa26.86■■□□□ 1.89
VPS13B-204ENST00000441350 RLBP1P12271 317 aa26.86■■□□□ 1.89
VPS13B-204ENST00000441350 PANK1Q8TE04 598 aa26.86■■□□□ 1.89
VPS13B-204ENST00000441350 CCNL1Q9UK58 526 aaPredicted RBP26.86■■□□□ 1.89
VPS13B-204ENST00000441350 CLUAP1Q96AJ1 413 aa26.85■■□□□ 1.89
VPS13B-204ENST00000441350 KCNQ4P56696 695 aa26.84■■□□□ 1.89
VPS13B-204ENST00000441350 FKBP5Q13451 457 aaPredicted RBP26.84■■□□□ 1.89
VPS13B-204ENST00000441350 PLSCR1O15162 318 aa26.83■■□□□ 1.89
VPS13B-204ENST00000441350 INTS5Q6P9B9 1019 aaKnown RBP26.83■■□□□ 1.89
VPS13B-204ENST00000441350 LINC00116Q8NCU8 138 aa26.83■■□□□ 1.89
VPS13B-204ENST00000441350 ABCC4O15439 1325 aa26.83■■□□□ 1.89
VPS13B-204ENST00000441350 TAF1LQ8IZX4 1826 aa26.83■■□□□ 1.89
VPS13B-204ENST00000441350 MYH14Q7Z406 1995 aaKnown RBP26.83■■□□□ 1.89
VPS13B-204ENST00000441350 CRKLP46109 303 aaKnown RBP26.83■■□□□ 1.88
VPS13B-204ENST00000441350 FKBP8Q14318 412 aa26.83■■□□□ 1.88
VPS13B-204ENST00000441350 FTSJ3Q8IY81 847 aaKnown RBP26.83■■□□□ 1.88
VPS13B-204ENST00000441350 CCDC87Q9NVE4 849 aa26.83■■□□□ 1.88
VPS13B-204ENST00000441350 APBA3O96018 575 aa26.82■■□□□ 1.88
VPS13B-204ENST00000441350 XAGE3Q8WTP9 111 aa26.82■■□□□ 1.88
VPS13B-204ENST00000441350 ZBTB1Q9Y2K1 713 aa26.82■■□□□ 1.88
VPS13B-204ENST00000441350 SLC27A3Q5K4L6 730 aa26.81■■□□□ 1.88
VPS13B-204ENST00000441350 COPS6Q7L5N1 327 aa26.81■■□□□ 1.88
VPS13B-204ENST00000441350 CNTNAP4Q9C0A0 1308 aa26.8■■□□□ 1.88
VPS13B-204ENST00000441350 LRRC4BQ9NT99 713 aa26.8■■□□□ 1.88
VPS13B-204ENST00000441350 CRBNQ96SW2 442 aa26.79■■□□□ 1.88
VPS13B-204ENST00000441350 RGPD3A6NKT7 1758 aaPredicted RBP26.79■■□□□ 1.88
VPS13B-204ENST00000441350 RGPD4Q7Z3J3 1758 aa26.79■■□□□ 1.88
VPS13B-204ENST00000441350 ADCY9O60503 1353 aa26.79■■□□□ 1.88
VPS13B-204ENST00000441350 F6X3S4 739 aa26.79■■□□□ 1.88
VPS13B-204ENST00000441350 IL6STP40189 918 aaPredicted RBP26.79■■□□□ 1.88
VPS13B-204ENST00000441350 AIMP1Q12904 312 aaKnown RBP26.79■■□□□ 1.88
VPS13B-204ENST00000441350 RC3H1Q5TC82 1133 aaKnown RBP26.79■■□□□ 1.88
VPS13B-204ENST00000441350 PROM2Q8N271 834 aa26.79■■□□□ 1.88
VPS13B-204ENST00000441350 TMEM57Q8N5G2 664 aa26.79■■□□□ 1.88
VPS13B-204ENST00000441350 PI4KAP2A4QPH2 592 aa26.78■■□□□ 1.88
VPS13B-204ENST00000441350 DDX58O95786 925 aaKnown RBP26.78■■□□□ 1.88
VPS13B-204ENST00000441350 KSR2Q6VAB6 950 aa26.78■■□□□ 1.88
VPS13B-204ENST00000441350 PI4KAP1Q8N8J0 262 aa26.78■■□□□ 1.88
VPS13B-204ENST00000441350 COG6Q9Y2V7 657 aa26.78■■□□□ 1.88
VPS13B-204ENST00000441350 TXNRD1Q16881 649 aa26.77■■□□□ 1.88
VPS13B-204ENST00000441350 GTF3C3Q9Y5Q9 886 aa26.77■■□□□ 1.88
VPS13B-204ENST00000441350 EIF5P55010 431 aaKnown RBP26.76■■□□□ 1.87
VPS13B-204ENST00000441350 INTS3Q68E01 1043 aaKnown RBP26.76■■□□□ 1.87
VPS13B-204ENST00000441350 PXDNLA1KZ92 1463 aa26.76■■□□□ 1.87
VPS13B-204ENST00000441350 MVPQ14764 893 aaKnown RBP26.76■■□□□ 1.87
VPS13B-204ENST00000441350 ANKRD13DQ6ZTN6 518 aa26.76■■□□□ 1.87
VPS13B-204ENST00000441350 EXOC6Q8TAG9 804 aa26.76■■□□□ 1.87
VPS13B-204ENST00000441350 C4BP0C0L5 1744 aa26.75■■□□□ 1.87
VPS13B-204ENST00000441350 ERICH6BQ5W0A0 696 aa26.75■■□□□ 1.87
VPS13B-204ENST00000441350 TTLL7Q6ZT98 887 aa26.75■■□□□ 1.87
VPS13B-204ENST00000441350 DNAAF4Q8WXU2 420 aa26.75■■□□□ 1.87
VPS13B-204ENST00000441350 N4BP2Q86UW6 1770 aaPredicted RBP26.74■■□□□ 1.87
VPS13B-204ENST00000441350 MAP3K2Q9Y2U5 619 aa26.74■■□□□ 1.87
VPS13B-204ENST00000441350 PLBD2Q8NHP8 589 aa26.73■■□□□ 1.87
VPS13B-204ENST00000441350 SLC4A10Q6U841 1118 aa26.72■■□□□ 1.87
VPS13B-204ENST00000441350 NUP188Q5SRE5 1749 aa26.72■■□□□ 1.87
VPS13B-204ENST00000441350 HMGB2P26583 209 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms