RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 FMNL2Q96PY5 1086 aa16.95■□□□□ 0.3
ZNF3-209ENST00000441298 PARP3Q9Y6F1 533 aa16.95■□□□□ 0.3
ZNF3-209ENST00000441298 ZPR1O75312 459 aa16.94■□□□□ 0.3
ZNF3-209ENST00000441298 USPL1Q5W0Q7 1092 aa16.94■□□□□ 0.3
ZNF3-209ENST00000441298 CHD4Q14839 1912 aa16.94■□□□□ 0.3
ZNF3-209ENST00000441298 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
ZNF3-209ENST00000441298 FKBP8Q14318 412 aa16.93■□□□□ 0.3
ZNF3-209ENST00000441298 PLEKHF1Q96S99 279 aa16.92■□□□□ 0.3
ZNF3-209ENST00000441298 THUMPD2Q9BTF0 503 aaKnown RBP16.92■□□□□ 0.3
ZNF3-209ENST00000441298 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
ZNF3-209ENST00000441298 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
ZNF3-209ENST00000441298 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
ZNF3-209ENST00000441298 N4BP2Q86UW6 1770 aaPredicted RBP16.91■□□□□ 0.3
ZNF3-209ENST00000441298 C10orf71Q711Q0 1435 aa16.9■□□□□ 0.3
ZNF3-209ENST00000441298 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
ZNF3-209ENST00000441298 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
ZNF3-209ENST00000441298 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
ZNF3-209ENST00000441298 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
ZNF3-209ENST00000441298 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
ZNF3-209ENST00000441298 PIP4K2AP48426 406 aaPredicted RBP16.89■□□□□ 0.29
ZNF3-209ENST00000441298 DDR1Q08345 913 aa16.89■□□□□ 0.29
ZNF3-209ENST00000441298 TEX13AQ9BXU3 409 aaPredicted RBP16.89■□□□□ 0.29
ZNF3-209ENST00000441298 KIF13BQ9NQT8 1826 aa16.89■□□□□ 0.29
ZNF3-209ENST00000441298 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
ZNF3-209ENST00000441298 GRIN3BO60391 1043 aa16.88■□□□□ 0.29
ZNF3-209ENST00000441298 A1BGP04217 495 aa16.88■□□□□ 0.29
ZNF3-209ENST00000441298 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
ZNF3-209ENST00000441298 BICDL1Q6ZP65 573 aa16.88■□□□□ 0.29
ZNF3-209ENST00000441298 PRKRIP1Q9H875 184 aaPredicted RBP16.88■□□□□ 0.29
ZNF3-209ENST00000441298 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
ZNF3-209ENST00000441298 RRP7AQ9Y3A4 280 aaKnown RBP16.87■□□□□ 0.29
ZNF3-209ENST00000441298 SCN7AQ01118 1682 aa16.87■□□□□ 0.29
ZNF3-209ENST00000441298 A0A087WZG4 1122 aa16.86■□□□□ 0.29
ZNF3-209ENST00000441298 A0A0G2JLW4 131 aa16.86■□□□□ 0.29
ZNF3-209ENST00000441298 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
ZNF3-209ENST00000441298 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
ZNF3-209ENST00000441298 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
ZNF3-209ENST00000441298 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
ZNF3-209ENST00000441298 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
ZNF3-209ENST00000441298 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
ZNF3-209ENST00000441298 KIAA1551Q9HCM1 1747 aa16.86■□□□□ 0.29
ZNF3-209ENST00000441298 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
ZNF3-209ENST00000441298 RIPK4P57078 832 aa16.85■□□□□ 0.29
ZNF3-209ENST00000441298 NFIXQ14938 502 aa16.85■□□□□ 0.29
ZNF3-209ENST00000441298 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
ZNF3-209ENST00000441298 DPEP1P16444 411 aa16.84■□□□□ 0.29
ZNF3-209ENST00000441298 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
ZNF3-209ENST00000441298 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
ZNF3-209ENST00000441298 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
ZNF3-209ENST00000441298 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
ZNF3-209ENST00000441298 UTRNP46939 3433 aa16.83■□□□□ 0.29
ZNF3-209ENST00000441298 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
ZNF3-209ENST00000441298 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
ZNF3-209ENST00000441298 TGFB2P61812 414 aa16.83■□□□□ 0.28
ZNF3-209ENST00000441298 ZNF784Q8NCA9 323 aaPredicted RBP16.83■□□□□ 0.28
ZNF3-209ENST00000441298 TM4SF1P30408 202 aa16.82■□□□□ 0.28
ZNF3-209ENST00000441298 LMOD3Q0VAK6 560 aa16.82■□□□□ 0.28
ZNF3-209ENST00000441298 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
ZNF3-209ENST00000441298 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
ZNF3-209ENST00000441298 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
ZNF3-209ENST00000441298 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
ZNF3-209ENST00000441298 NPHP1O15259 732 aa16.81■□□□□ 0.28
ZNF3-209ENST00000441298 TBC1D9BQ66K14 1250 aa16.81■□□□□ 0.28
ZNF3-209ENST00000441298 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
ZNF3-209ENST00000441298 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
ZNF3-209ENST00000441298 SERPINB2P05120 415 aa16.8■□□□□ 0.28
ZNF3-209ENST00000441298 CHRNA5P30532 468 aa16.8■□□□□ 0.28
ZNF3-209ENST00000441298 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
ZNF3-209ENST00000441298 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
ZNF3-209ENST00000441298 LAS1LQ9Y4W2 734 aaKnown RBP16.8■□□□□ 0.28
ZNF3-209ENST00000441298 CAMTA2O94983 1202 aa16.79■□□□□ 0.28
ZNF3-209ENST00000441298 BRCA1P38398 1863 aaKnown RBP16.79■□□□□ 0.28
ZNF3-209ENST00000441298 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
ZNF3-209ENST00000441298 EIF4A1P60842 406 aaKnown RBP16.78■□□□□ 0.28
ZNF3-209ENST00000441298 CCDC24Q8N4L8 307 aa16.78■□□□□ 0.28
ZNF3-209ENST00000441298 NRXN2Q9P2S2 1712 aa16.78■□□□□ 0.28
ZNF3-209ENST00000441298 NBPF26B4DH59 902 aa16.77■□□□□ 0.28
ZNF3-209ENST00000441298 GIGYF1O75420 1035 aaPredicted RBP16.77■□□□□ 0.28
ZNF3-209ENST00000441298 NBPF10Q6P3W6 841 aaKnown RBP16.77■□□□□ 0.28
ZNF3-209ENST00000441298 NBPF15Q8N660 670 aa16.77■□□□□ 0.28
ZNF3-209ENST00000441298 MYL6BP14649 208 aa16.76■□□□□ 0.27
ZNF3-209ENST00000441298 ARHGAP27Q6ZUM4 889 aa16.76■□□□□ 0.27
ZNF3-209ENST00000441298 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
ZNF3-209ENST00000441298 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
ZNF3-209ENST00000441298 ZNF652Q9Y2D9 606 aa16.76■□□□□ 0.27
ZNF3-209ENST00000441298 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
ZNF3-209ENST00000441298 CNBD1Q8NA66 436 aa16.75■□□□□ 0.27
ZNF3-209ENST00000441298 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
ZNF3-209ENST00000441298 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
ZNF3-209ENST00000441298 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
ZNF3-209ENST00000441298 FAM177BA6PVY3 158 aa16.74■□□□□ 0.27
ZNF3-209ENST00000441298 EIF2S2P20042 333 aaKnown RBP16.74■□□□□ 0.27
ZNF3-209ENST00000441298 KCNA3P22001 575 aa16.74■□□□□ 0.27
ZNF3-209ENST00000441298 C2CD5Q86YS7 1000 aa16.74■□□□□ 0.27
ZNF3-209ENST00000441298 ARFGEF1Q9Y6D6 1849 aa16.74■□□□□ 0.27
ZNF3-209ENST00000441298 ANP32CO43423 234 aa16.73■□□□□ 0.27
ZNF3-209ENST00000441298 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
ZNF3-209ENST00000441298 PRR5LQ6MZQ0 368 aa16.73■□□□□ 0.27
ZNF3-209ENST00000441298 NECTIN2Q92692 538 aa16.73■□□□□ 0.27
ZNF3-209ENST00000441298 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms