RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 SLIT2O94813 1529 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 GPTP24298 496 aa7.92□□□□□ -1.14
PUM1-207ENST00000440538 CCNL1Q9UK58 526 aaPredicted RBP7.92□□□□□ -1.14
PUM1-207ENST00000440538 BARGINQ6ZT62 677 aa7.91□□□□□ -1.14
PUM1-207ENST00000440538 CDCA7Q9BWT1 371 aaPredicted RBP7.91□□□□□ -1.14
PUM1-207ENST00000440538 OVOS2A0A0G2JMS6 1433 aa7.91□□□□□ -1.14
PUM1-207ENST00000440538 KDM6AO15550 1401 aaPredicted RBP7.91□□□□□ -1.14
PUM1-207ENST00000440538 IQSEC2Q5JU85 1478 aa7.91□□□□□ -1.14
PUM1-207ENST00000440538 CCDC27Q2M243 656 aa7.91□□□□□ -1.14
PUM1-207ENST00000440538 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
PUM1-207ENST00000440538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.91□□□□□ -1.148e-10■□□□□ 11.2
PUM1-207ENST00000440538 LOC102724428A0A0B4J2F2 783 aa7.9□□□□□ -1.14
PUM1-207ENST00000440538 SIK1P57059 783 aa7.9□□□□□ -1.14
PUM1-207ENST00000440538 CCDC30Q5VVM6 783 aa7.9□□□□□ -1.14
PUM1-207ENST00000440538 COPS6Q7L5N1 327 aa7.9□□□□□ -1.14
PUM1-207ENST00000440538 PPP1R1BQ9UD71 204 aaPredicted RBP7.9□□□□□ -1.14
PUM1-207ENST00000440538 GIGYF1O75420 1035 aaPredicted RBP7.9□□□□□ -1.14
PUM1-207ENST00000440538 SNRPA1P09661 255 aaKnown RBP7.9□□□□□ -1.14
PUM1-207ENST00000440538 XAGE3Q8WTP9 111 aa7.9□□□□□ -1.14
PUM1-207ENST00000440538 GNPATO15228 680 aa7.9□□□□□ -1.15
PUM1-207ENST00000440538 RLBP1P12271 317 aa7.9□□□□□ -1.15
PUM1-207ENST00000440538 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.9□□□□□ -1.15
PUM1-207ENST00000440538 ZBTB1Q9Y2K1 713 aa7.9□□□□□ -1.15
PUM1-207ENST00000440538 CHMP3Q9Y3E7 222 aa7.9□□□□□ -1.15
PUM1-207ENST00000440538 PI4KAP2A4QPH2 592 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 ERVV-2B6SEH9 535 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 MSL1Q68DK7 614 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 FAM196AQ6ZSG2 479 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 PI4KAP1Q8N8J0 262 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 HTATSF1O43719 755 aaKnown RBP7.89□□□□□ -1.15
PUM1-207ENST00000440538 MS4A1P11836 297 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 TTLL7Q6ZT98 887 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 SLC4A9Q96Q91 983 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 ZNF853P0CG23 659 aa7.89□□□□□ -1.15
PUM1-207ENST00000440538 STARD3NLO95772 234 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 FLIIQ13045 1269 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 ITPK1Q13572 414 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 CWF19L2Q2TBE0 894 aaKnown RBP7.88□□□□□ -1.15
PUM1-207ENST00000440538 ZKSCAN2Q63HK3 967 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 TFCP2L1Q9NZI6 479 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 PALLDQ8WX93 1383 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 TRIM27P14373 513 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 DDRGK1Q96HY6 314 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 EZH2Q15910 746 aaKnown RBP7.88□□□□□ -1.15
PUM1-207ENST00000440538 TMEM57Q8N5G2 664 aa7.88□□□□□ -1.15
PUM1-207ENST00000440538 GTF2E1P29083 439 aaPredicted RBP7.87□□□□□ -1.15
PUM1-207ENST00000440538 DZIP1LQ8IYY4 767 aaKnown RBP7.87□□□□□ -1.15
PUM1-207ENST00000440538 AK7Q96M32 723 aa7.87□□□□□ -1.15
PUM1-207ENST00000440538 MYD88Q99836 296 aa7.87□□□□□ -1.15
PUM1-207ENST00000440538 COL14A1Q05707 1796 aaKnown RBP7.87□□□□□ -1.15
PUM1-207ENST00000440538 MAP3K2Q9Y2U5 619 aa7.87□□□□□ -1.15
PUM1-207ENST00000440538 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
PUM1-207ENST00000440538 CRKLP46109 303 aaKnown RBP7.87□□□□□ -1.15
PUM1-207ENST00000440538 SRP68Q9UHB9 627 aaKnown RBP7.87□□□□□ -1.15
PUM1-207ENST00000440538 C8orf34Q49A92 452 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 COL18A1P39060 1754 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 IL16Q14005 1332 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 MRPL50Q8N5N7 158 aaKnown RBP7.86□□□□□ -1.15
PUM1-207ENST00000440538 SLKQ9H2G2 1235 aaPredicted RBP7.86□□□□□ -1.15
PUM1-207ENST00000440538 RRAGDQ9NQL2 400 aaPredicted RBP7.86□□□□□ -1.15
PUM1-207ENST00000440538 DBF4Q9UBU7 674 aaPredicted RBP7.86□□□□□ -1.15
PUM1-207ENST00000440538 NBPF26B4DH59 902 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 IPO8O15397 1037 aaKnown RBP7.86□□□□□ -1.15
PUM1-207ENST00000440538 NBPF14Q5TI25 921 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 NBPF10Q6P3W6 841 aaKnown RBP7.86□□□□□ -1.15
PUM1-207ENST00000440538 ATF7IPQ6VMQ6 1270 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 NBPF15Q8N660 670 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 LRRC4BQ9NT99 713 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 C9orf78Q9NZ63 289 aaPredicted RBP7.86□□□□□ -1.15
PUM1-207ENST00000440538 CEMIPQ8WUJ3 1361 aa7.86□□□□□ -1.15
PUM1-207ENST00000440538 TXNRD1Q16881 649 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 TRMT2AQ8IZ69 625 aaKnown RBP7.85□□□□□ -1.15
PUM1-207ENST00000440538 LINC00116Q8NCU8 138 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 TNS2Q63HR2 1409 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 PLCH1Q4KWH8 1693 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 ABCA3Q99758 1704 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 ATRNO75882 1429 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 NKX1-1Q15270 411 aaPredicted RBP7.85□□□□□ -1.15
PUM1-207ENST00000440538 ILDR2Q71H61 639 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 DZIP3Q86Y13 1208 aaKnown RBP7.85□□□□□ -1.15
PUM1-207ENST00000440538 SYNE4Q8N205 404 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 LMO7Q8WWI1 1683 aa7.85□□□□□ -1.15
PUM1-207ENST00000440538 SEC24BO95487 1268 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 KIF6Q6ZMV9 814 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 ANKRD13DQ6ZTN6 518 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 AMIGO3Q86WK7 504 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 RGS12O14924 1447 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 RFC4P35249 363 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 PDGFDQ9GZP0 370 aaPredicted RBP7.84□□□□□ -1.15
PUM1-207ENST00000440538 HEG1Q9ULI3 1381 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 HLFQ16534 295 aa7.84□□□□□ -1.15
PUM1-207ENST00000440538 SMARCC1Q92922 1105 aaPredicted RBP7.84□□□□□ -1.15
PUM1-207ENST00000440538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.16
PUM1-207ENST00000440538 NUTM1Q86Y26 1132 aa7.84□□□□□ -1.16
PUM1-207ENST00000440538 MEIS3Q99687 375 aa7.84□□□□□ -1.16
PUM1-207ENST00000440538 CCDC87Q9NVE4 849 aa7.84□□□□□ -1.16
PUM1-207ENST00000440538 RTCBQ9Y3I0 505 aaKnown RBP7.84□□□□□ -1.16
PUM1-207ENST00000440538 DISP2A7MBM2 1401 aa7.83□□□□□ -1.16
PUM1-207ENST00000440538 ZPR1O75312 459 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms