RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 NARFQ9UHQ1 456 aa21.73■■□□□ 1.07
SNRPD3-204ENST00000439775 USPL1Q5W0Q7 1092 aa21.72■■□□□ 1.07
SNRPD3-204ENST00000439775 TEX13AQ9BXU3 409 aaPredicted RBP21.72■■□□□ 1.07
SNRPD3-204ENST00000439775 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
SNRPD3-204ENST00000439775 ADCY9O60503 1353 aa21.72■■□□□ 1.07
SNRPD3-204ENST00000439775 N4BP2Q86UW6 1770 aaPredicted RBP21.71■■□□□ 1.07
SNRPD3-204ENST00000439775 POLRMTO00411 1230 aaKnown RBP21.71■■□□□ 1.07
SNRPD3-204ENST00000439775 TM4SF1P30408 202 aa21.71■■□□□ 1.07
SNRPD3-204ENST00000439775 FMNL2Q96PY5 1086 aa21.71■■□□□ 1.07
SNRPD3-204ENST00000439775 A0A0G2JLW4 131 aa21.7■■□□□ 1.06
SNRPD3-204ENST00000439775 RTF1Q92541 710 aaKnown RBP21.7■■□□□ 1.06
SNRPD3-204ENST00000439775 BTBD11A6QL63 1104 aa21.69■■□□□ 1.06
SNRPD3-204ENST00000439775 DPEP1P16444 411 aa21.69■■□□□ 1.06
SNRPD3-204ENST00000439775 EIF5P55010 431 aaKnown RBP21.69■■□□□ 1.06
SNRPD3-204ENST00000439775 ATP10DQ9P241 1426 aa21.69■■□□□ 1.06
SNRPD3-204ENST00000439775 BRCA1P38398 1863 aaKnown RBP21.69■■□□□ 1.06
SNRPD3-204ENST00000439775 HTATSF1O43719 755 aaKnown RBP21.68■■□□□ 1.06
SNRPD3-204ENST00000439775 CANXP27824 592 aaKnown RBP21.68■■□□□ 1.06
SNRPD3-204ENST00000439775 NRXN2Q9P2S2 1712 aa21.67■■□□□ 1.06
SNRPD3-204ENST00000439775 BCL2L12Q9HB09 334 aa21.67■■□□□ 1.06
SNRPD3-204ENST00000439775 A0A087WZG4 1122 aa21.66■■□□□ 1.06
SNRPD3-204ENST00000439775 GIGYF1O75420 1035 aaPredicted RBP21.66■■□□□ 1.06
SNRPD3-204ENST00000439775 KCNA3P22001 575 aa21.66■■□□□ 1.06
SNRPD3-204ENST00000439775 NFIXQ14938 502 aa21.66■■□□□ 1.06
SNRPD3-204ENST00000439775 MCM10Q7L590 875 aa21.66■■□□□ 1.06
SNRPD3-204ENST00000439775 BCS1LQ9Y276 419 aa21.66■■□□□ 1.06
SNRPD3-204ENST00000439775 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
SNRPD3-204ENST00000439775 KCNQ3O43525 872 aa21.64■■□□□ 1.05
SNRPD3-204ENST00000439775 IL6STP40189 918 aaPredicted RBP21.64■■□□□ 1.05
SNRPD3-204ENST00000439775 C1QTNF8P60827 252 aa21.64■■□□□ 1.05
SNRPD3-204ENST00000439775 NEFMP07197 916 aa21.63■■□□□ 1.05
SNRPD3-204ENST00000439775 PIM2Q9P1W9 311 aa21.63■■□□□ 1.05
SNRPD3-204ENST00000439775 PLEKHF1Q96S99 279 aa21.62■■□□□ 1.05
SNRPD3-204ENST00000439775 ARFGEF1Q9Y6D6 1849 aa21.62■■□□□ 1.05
SNRPD3-204ENST00000439775 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
SNRPD3-204ENST00000439775 RALBP1Q15311 655 aa21.61■■□□□ 1.05
SNRPD3-204ENST00000439775 AFDNP55196 1824 aaKnown RBP21.61■■□□□ 1.05
SNRPD3-204ENST00000439775 A1BGP04217 495 aa21.6■■□□□ 1.05
SNRPD3-204ENST00000439775 SNRPA1P09661 255 aaKnown RBP21.6■■□□□ 1.05
SNRPD3-204ENST00000439775 SERPINB2P05120 415 aa21.59■■□□□ 1.05
SNRPD3-204ENST00000439775 DALRD3Q5D0E6 543 aaKnown RBP21.59■■□□□ 1.05
SNRPD3-204ENST00000439775 PNNQ9H307 717 aaKnown RBP21.59■■□□□ 1.05
SNRPD3-204ENST00000439775 GPBP1L1Q9HC44 474 aaPredicted RBP21.59■■□□□ 1.05
SNRPD3-204ENST00000439775 CHRNA5P30532 468 aa21.58■■□□□ 1.05
SNRPD3-204ENST00000439775 TAF7Q15545 349 aaPredicted RBP21.58■■□□□ 1.05
SNRPD3-204ENST00000439775 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
SNRPD3-204ENST00000439775 ZNF330Q9Y3S2 320 aaPredicted RBP21.58■■□□□ 1.05
SNRPD3-204ENST00000439775 USP16Q9Y5T5 823 aa21.58■■□□□ 1.05
SNRPD3-204ENST00000439775 BCORQ6W2J9 1755 aa21.57■■□□□ 1.04
SNRPD3-204ENST00000439775 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
SNRPD3-204ENST00000439775 ARHGAP27Q6ZUM4 889 aa21.57■■□□□ 1.04
SNRPD3-204ENST00000439775 TBC1D2BQ9UPU7 963 aa21.57■■□□□ 1.04
SNRPD3-204ENST00000439775 CARMIL3Q8ND23 1372 aa21.57■■□□□ 1.04
SNRPD3-204ENST00000439775 DLEC1Q9Y238 1755 aa21.56■■□□□ 1.04
SNRPD3-204ENST00000439775 PRAMEF22A3QJZ6 481 aa21.56■■□□□ 1.04
SNRPD3-204ENST00000439775 CAMTA2O94983 1202 aa21.56■■□□□ 1.04
SNRPD3-204ENST00000439775 TBC1D9BQ66K14 1250 aa21.56■■□□□ 1.04
SNRPD3-204ENST00000439775 DLG5Q8TDM6 1919 aa21.56■■□□□ 1.04
SNRPD3-204ENST00000439775 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
SNRPD3-204ENST00000439775 PNISRQ8TF01 805 aaKnown RBP21.55■■□□□ 1.04
SNRPD3-204ENST00000439775 KDM3BQ7LBC6 1761 aa21.54■■□□□ 1.04
SNRPD3-204ENST00000439775 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
SNRPD3-204ENST00000439775 BICDL1Q6ZP65 573 aa21.54■■□□□ 1.04
SNRPD3-204ENST00000439775 DZIP3Q86Y13 1208 aaKnown RBP21.54■■□□□ 1.04
SNRPD3-204ENST00000439775 ZNF526Q8TF50 670 aaPredicted RBP21.54■■□□□ 1.04
SNRPD3-204ENST00000439775 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
SNRPD3-204ENST00000439775 MYBBP1AQ9BQG0 1328 aaKnown RBP21.53■■□□□ 1.04
SNRPD3-204ENST00000439775 RGL2O15211 777 aa21.51■■□□□ 1.03
SNRPD3-204ENST00000439775 PIP4K2AP48426 406 aaPredicted RBP21.51■■□□□ 1.03
SNRPD3-204ENST00000439775 CLEC4GQ6UXB4 293 aa21.51■■□□□ 1.03
SNRPD3-204ENST00000439775 PDZRN3Q9UPQ7 1066 aa21.51■■□□□ 1.03
SNRPD3-204ENST00000439775 SENP3-EIF4A1A0A087X0R7 540 aa21.5■■□□□ 1.03
SNRPD3-204ENST00000439775 PRR5LQ6MZQ0 368 aa21.5■■□□□ 1.03
SNRPD3-204ENST00000439775 C2CD5Q86YS7 1000 aa21.5■■□□□ 1.03
SNRPD3-204ENST00000439775 SETDB2Q96T68 719 aa21.5■■□□□ 1.03
SNRPD3-204ENST00000439775 BRIP1Q9BX63 1249 aa21.5■■□□□ 1.03
SNRPD3-204ENST00000439775 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
SNRPD3-204ENST00000439775 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
SNRPD3-204ENST00000439775 H0YIN7 160 aa21.49■■□□□ 1.03
SNRPD3-204ENST00000439775 C9orf131Q5VYM1 1079 aa21.49■■□□□ 1.03
SNRPD3-204ENST00000439775 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
SNRPD3-204ENST00000439775 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
SNRPD3-204ENST00000439775 ZNF652Q9Y2D9 606 aa21.49■■□□□ 1.03
SNRPD3-204ENST00000439775 ANKRD31Q8N7Z5 1873 aa21.49■■□□□ 1.03
SNRPD3-204ENST00000439775 PDE6BP35913 854 aa21.48■■□□□ 1.03
SNRPD3-204ENST00000439775 TTLL6Q8N841 843 aa21.48■■□□□ 1.03
SNRPD3-204ENST00000439775 CNBD1Q8NA66 436 aa21.48■■□□□ 1.03
SNRPD3-204ENST00000439775 THUMPD2Q9BTF0 503 aaKnown RBP21.48■■□□□ 1.03
SNRPD3-204ENST00000439775 EIF4A1P60842 406 aaKnown RBP21.47■■□□□ 1.03
SNRPD3-204ENST00000439775 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
SNRPD3-204ENST00000439775 KIF3CO14782 793 aa21.46■■□□□ 1.03
SNRPD3-204ENST00000439775 ST5P78524 1137 aa21.45■■□□□ 1.02
SNRPD3-204ENST00000439775 NPHP1O15259 732 aa21.44■■□□□ 1.02
SNRPD3-204ENST00000439775 RIPK4P57078 832 aa21.44■■□□□ 1.02
SNRPD3-204ENST00000439775 LMOD3Q0VAK6 560 aa21.44■■□□□ 1.02
SNRPD3-204ENST00000439775 RNF181Q9P0P0 153 aa21.44■■□□□ 1.02
SNRPD3-204ENST00000439775 ZC3H4Q9UPT8 1303 aaKnown RBP21.44■■□□□ 1.02
SNRPD3-204ENST00000439775 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
SNRPD3-204ENST00000439775 NBPF5PQ86XG9 351 aaPredicted RBP21.42■■□□□ 1.02
SNRPD3-204ENST00000439775 CCDC24Q8N4L8 307 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms