RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SPON1Q9HCB6 807 aa25.47■■□□□ 1.67
SEMA3B-206ENST00000439487 STARD3NLO95772 234 aa25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 SNRPA1P09661 255 aaKnown RBP25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 SLC16A10Q8TF71 515 aa25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 MTFR1LQ9H019 292 aa25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 BABAM1Q9NWV8 329 aa25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 SALL2Q9Y467 1007 aaPredicted RBP25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 USP16Q9Y5T5 823 aa25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
SEMA3B-206ENST00000439487 CHL1O00533 1208 aa25.45■■□□□ 1.66
SEMA3B-206ENST00000439487 TRAPPC3LQ5T215 181 aa25.45■■□□□ 1.66
SEMA3B-206ENST00000439487 ZBTB1Q9Y2K1 713 aa25.45■■□□□ 1.66
SEMA3B-206ENST00000439487 LAMB4A4D0S4 1761 aa25.45■■□□□ 1.66
SEMA3B-206ENST00000439487 COL24A1Q17RW2 1714 aa25.44■■□□□ 1.66
SEMA3B-206ENST00000439487 CANXP27824 592 aaKnown RBP25.43■■□□□ 1.66
SEMA3B-206ENST00000439487 CCDC27Q2M243 656 aa25.43■■□□□ 1.66
SEMA3B-206ENST00000439487 ARHGEF1Q92888 912 aaKnown RBP25.43■■□□□ 1.66
SEMA3B-206ENST00000439487 A1BGP04217 495 aa25.42■■□□□ 1.66
SEMA3B-206ENST00000439487 WWC1Q8IX03 1113 aa25.42■■□□□ 1.66
SEMA3B-206ENST00000439487 CFAP44Q96MT7 982 aa25.42■■□□□ 1.66
SEMA3B-206ENST00000439487 GIGYF1O75420 1035 aaPredicted RBP25.41■■□□□ 1.66
SEMA3B-206ENST00000439487 ADRA2BP18089 450 aa25.41■■□□□ 1.66
SEMA3B-206ENST00000439487 CALD1Q05682 793 aaKnown RBP25.41■■□□□ 1.66
SEMA3B-206ENST00000439487 NCBP3Q53F19 620 aaKnown RBP25.41■■□□□ 1.66
SEMA3B-206ENST00000439487 MSL1Q68DK7 614 aa25.41■■□□□ 1.66
SEMA3B-206ENST00000439487 SOS1Q07889 1333 aaPredicted RBP25.4■■□□□ 1.66
SEMA3B-206ENST00000439487 ZNF853P0CG23 659 aa25.4■■□□□ 1.66
SEMA3B-206ENST00000439487 RFC4P35249 363 aa25.39■■□□□ 1.66
SEMA3B-206ENST00000439487 PTGER2P43116 358 aa25.39■■□□□ 1.66
SEMA3B-206ENST00000439487 IFT57Q9NWB7 429 aa25.39■■□□□ 1.66
SEMA3B-206ENST00000439487 PIP4K2AP48426 406 aaPredicted RBP25.38■■□□□ 1.65
SEMA3B-206ENST00000439487 GNAI1P63096 354 aa25.38■■□□□ 1.65
SEMA3B-206ENST00000439487 MBIPQ9NS73 344 aa25.38■■□□□ 1.65
SEMA3B-206ENST00000439487 KRT24Q2M2I5 525 aa25.37■■□□□ 1.65
SEMA3B-206ENST00000439487 SGIP1Q9BQI5 828 aa25.37■■□□□ 1.65
SEMA3B-206ENST00000439487 COL15A1P39059 1388 aa25.36■■□□□ 1.65
SEMA3B-206ENST00000439487 EIF5P55010 431 aaKnown RBP25.36■■□□□ 1.65
SEMA3B-206ENST00000439487 SRP68Q9UHB9 627 aaKnown RBP25.36■■□□□ 1.65
SEMA3B-206ENST00000439487 ZNF330Q9Y3S2 320 aaPredicted RBP25.35■■□□□ 1.65
SEMA3B-206ENST00000439487 IL6STP40189 918 aaPredicted RBP25.34■■□□□ 1.65
SEMA3B-206ENST00000439487 PPP1R1BQ9UD71 204 aaPredicted RBP25.34■■□□□ 1.65
SEMA3B-206ENST00000439487 NBPF26B4DH59 902 aa25.33■■□□□ 1.65
SEMA3B-206ENST00000439487 POLD1P28340 1107 aa25.33■■□□□ 1.65
SEMA3B-206ENST00000439487 NBPF10Q6P3W6 841 aaKnown RBP25.33■■□□□ 1.65
SEMA3B-206ENST00000439487 NBPF15Q8N660 670 aa25.33■■□□□ 1.65
SEMA3B-206ENST00000439487 GYS1P13807 737 aa25.32■■□□□ 1.64
SEMA3B-206ENST00000439487 EIF2S2P20042 333 aaKnown RBP25.32■■□□□ 1.64
SEMA3B-206ENST00000439487 NGEFQ8N5V2 710 aa25.32■■□□□ 1.64
SEMA3B-206ENST00000439487 USP42Q9H9J4 1324 aaKnown RBP25.32■■□□□ 1.64
SEMA3B-206ENST00000439487 ZPR1O75312 459 aa25.31■■□□□ 1.64
SEMA3B-206ENST00000439487 USPL1Q5W0Q7 1092 aa25.31■■□□□ 1.64
SEMA3B-206ENST00000439487 WDR63Q8IWG1 891 aa25.31■■□□□ 1.64
SEMA3B-206ENST00000439487 IL16Q14005 1332 aa25.31■■□□□ 1.64
SEMA3B-206ENST00000439487 A0A087WZG4 1122 aa25.3■■□□□ 1.64
SEMA3B-206ENST00000439487 TSR2Q969E8 191 aaKnown RBP25.3■■□□□ 1.64
SEMA3B-206ENST00000439487 ARXQ96QS3 562 aa25.3■■□□□ 1.64
SEMA3B-206ENST00000439487 NARFQ9UHQ1 456 aa25.3■■□□□ 1.64
SEMA3B-206ENST00000439487 TBC1D2BQ9UPU7 963 aa25.3■■□□□ 1.64
SEMA3B-206ENST00000439487 NPM2Q86SE8 214 aaKnown RBP25.29■■□□□ 1.64
SEMA3B-206ENST00000439487 NECTIN2Q92692 538 aa25.29■■□□□ 1.64
SEMA3B-206ENST00000439487 NLGN1Q8N2Q7 840 aa25.28■■□□□ 1.64
SEMA3B-206ENST00000439487 BCORQ6W2J9 1755 aa25.27■■□□□ 1.64
SEMA3B-206ENST00000439487 FKBP8Q14318 412 aa25.27■■□□□ 1.64
SEMA3B-206ENST00000439487 DUSP27Q5VZP5 1158 aa25.27■■□□□ 1.64
SEMA3B-206ENST00000439487 SCN7AQ01118 1682 aa25.26■■□□□ 1.63
SEMA3B-206ENST00000439487 ELL2O00472 640 aaPredicted RBP25.26■■□□□ 1.63
SEMA3B-206ENST00000439487 MYL6BP14649 208 aa25.26■■□□□ 1.63
SEMA3B-206ENST00000439487 C8orf58Q8NAV2 365 aa25.26■■□□□ 1.63
SEMA3B-206ENST00000439487 MMP10P09238 476 aa25.25■■□□□ 1.63
SEMA3B-206ENST00000439487 DZIP3Q86Y13 1208 aaKnown RBP25.25■■□□□ 1.63
SEMA3B-206ENST00000439487 BCL2L12Q9HB09 334 aa25.25■■□□□ 1.63
SEMA3B-206ENST00000439487 SPINK5Q9NQ38 1064 aaPredicted RBP25.25■■□□□ 1.63
SEMA3B-206ENST00000439487 ZNF521Q96K83 1311 aa25.25■■□□□ 1.63
SEMA3B-206ENST00000439487 ERBB4Q15303 1308 aa25.24■■□□□ 1.63
SEMA3B-206ENST00000439487 HOXB7P09629 217 aa25.24■■□□□ 1.63
SEMA3B-206ENST00000439487 ANXA1P04083 346 aa25.23■■□□□ 1.63
SEMA3B-206ENST00000439487 PDIA6Q15084 440 aa25.23■■□□□ 1.63
SEMA3B-206ENST00000439487 HDGFL1Q5TGJ6 251 aa25.23■■□□□ 1.63
SEMA3B-206ENST00000439487 NUP98P52948 1817 aa25.23■■□□□ 1.63
SEMA3B-206ENST00000439487 FANCIQ9NVI1 1328 aa25.22■■□□□ 1.63
SEMA3B-206ENST00000439487 CAMTA2O94983 1202 aa25.22■■□□□ 1.63
SEMA3B-206ENST00000439487 PROSER3Q2NL68 480 aa25.22■■□□□ 1.63
SEMA3B-206ENST00000439487 KLHL34Q8N239 644 aa25.22■■□□□ 1.63
SEMA3B-206ENST00000439487 TSPYL6Q8N831 410 aa25.22■■□□□ 1.63
SEMA3B-206ENST00000439487 AFDNP55196 1824 aaKnown RBP25.21■■□□□ 1.63
SEMA3B-206ENST00000439487 FHDC1Q9C0D6 1143 aaPredicted RBP25.21■■□□□ 1.63
SEMA3B-206ENST00000439487 TM4SF1P30408 202 aa25.19■■□□□ 1.62
SEMA3B-206ENST00000439487 TTLL7Q6ZT98 887 aa25.19■■□□□ 1.62
SEMA3B-206ENST00000439487 LRP10Q7Z4F1 713 aa25.19■■□□□ 1.62
SEMA3B-206ENST00000439487 CHPF2Q9P2E5 772 aa25.19■■□□□ 1.62
SEMA3B-206ENST00000439487 PARP3Q9Y6F1 533 aa25.19■■□□□ 1.62
SEMA3B-206ENST00000439487 DDR1Q08345 913 aa25.18■■□□□ 1.62
SEMA3B-206ENST00000439487 GOLGA2Q08379 1002 aa25.18■■□□□ 1.62
SEMA3B-206ENST00000439487 NFIXQ14938 502 aa25.18■■□□□ 1.62
SEMA3B-206ENST00000439487 BICDL1Q6ZP65 573 aa25.18■■□□□ 1.62
SEMA3B-206ENST00000439487 DDX21Q9NR30 783 aaKnown RBP eCLIP25.18■■□□□ 1.62
SEMA3B-206ENST00000439487 TBC1D9BQ66K14 1250 aa25.17■■□□□ 1.62
SEMA3B-206ENST00000439487 SYT17Q9BSW7 474 aa25.17■■□□□ 1.62
SEMA3B-206ENST00000439487 MYH16Q9H6N6 1097 aa25.17■■□□□ 1.62
SEMA3B-206ENST00000439487 EXOSC9Q06265 439 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms