RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 COL15A1P39059 1388 aa24.55■■□□□ 1.52
GTF3A-204ENST00000438571 U2SURPO15042 1029 aaKnown RBP24.55■■□□□ 1.52
GTF3A-204ENST00000438571 POLRMTO00411 1230 aaKnown RBP24.53■■□□□ 1.52
GTF3A-204ENST00000438571 FCHSD2O94868 740 aa24.53■■□□□ 1.52
GTF3A-204ENST00000438571 CACNA1SQ13698 1873 aa24.53■■□□□ 1.52
GTF3A-204ENST00000438571 CEP350Q5VT06 3117 aa24.52■■□□□ 1.52
GTF3A-204ENST00000438571 DLG5Q8TDM6 1919 aa24.51■■□□□ 1.51
GTF3A-204ENST00000438571 TM4SF1P30408 202 aa24.51■■□□□ 1.51
GTF3A-204ENST00000438571 CHRNA5P30532 468 aa24.51■■□□□ 1.51
GTF3A-204ENST00000438571 ARHGAP27Q6ZUM4 889 aa24.51■■□□□ 1.51
GTF3A-204ENST00000438571 BCL2L12Q9HB09 334 aa24.51■■□□□ 1.51
GTF3A-204ENST00000438571 BCORQ6W2J9 1755 aa24.51■■□□□ 1.51
GTF3A-204ENST00000438571 COL11A2P13942 1736 aaPredicted RBP24.5■■□□□ 1.51
GTF3A-204ENST00000438571 KIF3CO14782 793 aa24.5■■□□□ 1.51
GTF3A-204ENST00000438571 IL17REQ8NFR9 667 aa24.5■■□□□ 1.51
GTF3A-204ENST00000438571 ZPR1O75312 459 aa24.48■■□□□ 1.51
GTF3A-204ENST00000438571 NARFQ9UHQ1 456 aa24.48■■□□□ 1.51
GTF3A-204ENST00000438571 CARMIL3Q8ND23 1372 aa24.47■■□□□ 1.51
GTF3A-204ENST00000438571 CANXP27824 592 aaKnown RBP24.47■■□□□ 1.51
GTF3A-204ENST00000438571 NFIXQ14938 502 aa24.47■■□□□ 1.51
GTF3A-204ENST00000438571 VSIG10Q8N0Z9 540 aa24.47■■□□□ 1.51
GTF3A-204ENST00000438571 GAS2L2Q8NHY3 880 aa24.46■■□□□ 1.51
GTF3A-204ENST00000438571 ZNF496Q96IT1 587 aaPredicted RBP24.46■■□□□ 1.51
GTF3A-204ENST00000438571 PHACTR3Q96KR7 559 aa24.46■■□□□ 1.51
GTF3A-204ENST00000438571 PIM2Q9P1W9 311 aa24.46■■□□□ 1.51
GTF3A-204ENST00000438571 TIAM2Q8IVF5 1701 aa24.45■■□□□ 1.5
GTF3A-204ENST00000438571 GNAT3A8MTJ3 354 aa24.45■■□□□ 1.5
GTF3A-204ENST00000438571 RSPH6AQ9H0K4 717 aa24.45■■□□□ 1.5
GTF3A-204ENST00000438571 HEG1Q9ULI3 1381 aa24.44■■□□□ 1.5
GTF3A-204ENST00000438571 PRKAR2BP31323 418 aa24.44■■□□□ 1.5
GTF3A-204ENST00000438571 TTC5Q8N0Z6 440 aa24.44■■□□□ 1.5
GTF3A-204ENST00000438571 CEMIPQ8WUJ3 1361 aa24.43■■□□□ 1.5
GTF3A-204ENST00000438571 TEFQ10587 303 aa24.43■■□□□ 1.5
GTF3A-204ENST00000438571 DALRD3Q5D0E6 543 aaKnown RBP24.43■■□□□ 1.5
GTF3A-204ENST00000438571 KCNQ3O43525 872 aa24.42■■□□□ 1.5
GTF3A-204ENST00000438571 ZNF790Q6PG37 636 aa24.42■■□□□ 1.5
GTF3A-204ENST00000438571 TNRC6CQ9HCJ0 1690 aaKnown RBP24.42■■□□□ 1.5
GTF3A-204ENST00000438571 EIF5P55010 431 aaKnown RBP24.41■■□□□ 1.5
GTF3A-204ENST00000438571 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
GTF3A-204ENST00000438571 NMRK2Q9NPI5 230 aa24.41■■□□□ 1.5
GTF3A-204ENST00000438571 SERPINB2P05120 415 aa24.4■■□□□ 1.5
GTF3A-204ENST00000438571 HSPA6P17066 643 aa24.4■■□□□ 1.5
GTF3A-204ENST00000438571 PPP2R1AP30153 589 aa24.4■■□□□ 1.5
GTF3A-204ENST00000438571 LAMB4A4D0S4 1761 aa24.39■■□□□ 1.5
GTF3A-204ENST00000438571 BICDL1Q6ZP65 573 aa24.39■■□□□ 1.49
GTF3A-204ENST00000438571 DICER1Q9UPY3 1922 aaKnown RBP24.38■■□□□ 1.49
GTF3A-204ENST00000438571 RASSF7Q02833 373 aa24.38■■□□□ 1.49
GTF3A-204ENST00000438571 ZNF330Q9Y3S2 320 aaPredicted RBP24.38■■□□□ 1.49
GTF3A-204ENST00000438571 ARFGEF2Q9Y6D5 1785 aa24.38■■□□□ 1.49
GTF3A-204ENST00000438571 FER1L6Q2WGJ9 1857 aa24.38■■□□□ 1.49
GTF3A-204ENST00000438571 CFAP53Q96M91 514 aa24.37■■□□□ 1.49
GTF3A-204ENST00000438571 WDR90Q96KV7 1748 aa24.37■■□□□ 1.49
GTF3A-204ENST00000438571 STARD3NLO95772 234 aa24.36■■□□□ 1.49
GTF3A-204ENST00000438571 TBC1D9BQ66K14 1250 aa24.36■■□□□ 1.49
GTF3A-204ENST00000438571 RNF181Q9P0P0 153 aa24.36■■□□□ 1.49
GTF3A-204ENST00000438571 KDM3BQ7LBC6 1761 aa24.36■■□□□ 1.49
GTF3A-204ENST00000438571 PRAMEF22A3QJZ6 481 aa24.35■■□□□ 1.49
GTF3A-204ENST00000438571 A1BGP04217 495 aa24.35■■□□□ 1.49
GTF3A-204ENST00000438571 TBC1D2BQ9UPU7 963 aa24.35■■□□□ 1.49
GTF3A-204ENST00000438571 SLX4Q8IY92 1834 aa24.35■■□□□ 1.49
GTF3A-204ENST00000438571 BTBD11A6QL63 1104 aa24.34■■□□□ 1.49
GTF3A-204ENST00000438571 U2AF1L5P0DN76 240 aaPredicted RBP24.34■■□□□ 1.49
GTF3A-204ENST00000438571 PIP4K2AP48426 406 aaPredicted RBP24.34■■□□□ 1.49
GTF3A-204ENST00000438571 PRELPP51888 382 aa24.34■■□□□ 1.49
GTF3A-204ENST00000438571 U2AF1Q01081 240 aaKnown RBP eCLIP24.34■■□□□ 1.49
GTF3A-204ENST00000438571 MCM10Q7L590 875 aa24.34■■□□□ 1.49
GTF3A-204ENST00000438571 CCDC24Q8N4L8 307 aa24.34■■□□□ 1.49
GTF3A-204ENST00000438571 FMNL2Q96PY5 1086 aa24.34■■□□□ 1.49
GTF3A-204ENST00000438571 DCTN1Q14203 1278 aa24.32■■□□□ 1.48
GTF3A-204ENST00000438571 C2CD5Q86YS7 1000 aa24.32■■□□□ 1.48
GTF3A-204ENST00000438571 A0A087WZG4 1122 aa24.31■■□□□ 1.48
GTF3A-204ENST00000438571 IL6STP40189 918 aaPredicted RBP24.31■■□□□ 1.48
GTF3A-204ENST00000438571 NUDCQ9Y266 331 aa24.31■■□□□ 1.48
GTF3A-204ENST00000438571 USP16Q9Y5T5 823 aa24.31■■□□□ 1.48
GTF3A-204ENST00000438571 TEX13AQ9BXU3 409 aaPredicted RBP24.3■■□□□ 1.48
GTF3A-204ENST00000438571 TOMM70O94826 608 aa24.29■■□□□ 1.48
GTF3A-204ENST00000438571 CAMTA2O94983 1202 aa24.29■■□□□ 1.48
GTF3A-204ENST00000438571 PRR5LQ6MZQ0 368 aa24.29■■□□□ 1.48
GTF3A-204ENST00000438571 NUP98P52948 1817 aa24.28■■□□□ 1.48
GTF3A-204ENST00000438571 TTLL6Q8N841 843 aa24.27■■□□□ 1.48
GTF3A-204ENST00000438571 H0YIN7 160 aa24.25■■□□□ 1.47
GTF3A-204ENST00000438571 NFKBIEO00221 500 aa24.25■■□□□ 1.47
GTF3A-204ENST00000438571 DZIP3Q86Y13 1208 aaKnown RBP24.25■■□□□ 1.47
GTF3A-204ENST00000438571 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
GTF3A-204ENST00000438571 RRAGCQ9HB90 399 aa24.24■■□□□ 1.47
GTF3A-204ENST00000438571 ZNF622Q969S3 477 aaKnown RBP eCLIP24.23■■□□□ 1.47
GTF3A-204ENST00000438571 ZNF219Q9P2Y4 722 aaPredicted RBP24.23■■□□□ 1.47
GTF3A-204ENST00000438571 KDM2BQ8NHM5 1336 aa24.23■■□□□ 1.47
GTF3A-204ENST00000438571 NBPF26B4DH59 902 aa24.21■■□□□ 1.47
GTF3A-204ENST00000438571 NBPF10Q6P3W6 841 aaKnown RBP24.21■■□□□ 1.47
GTF3A-204ENST00000438571 NBPF15Q8N660 670 aa24.21■■□□□ 1.47
GTF3A-204ENST00000438571 RBM46Q8TBY0 533 aaKnown RBP24.21■■□□□ 1.47
GTF3A-204ENST00000438571 BRIP1Q9BX63 1249 aa24.21■■□□□ 1.47
GTF3A-204ENST00000438571 MIS18AQ9NYP9 233 aa24.21■■□□□ 1.47
GTF3A-204ENST00000438571 SNRPA1P09661 255 aaKnown RBP24.2■■□□□ 1.46
GTF3A-204ENST00000438571 LMNB1P20700 586 aa24.2■■□□□ 1.46
GTF3A-204ENST00000438571 HTRA3P83110 453 aa24.2■■□□□ 1.46
GTF3A-204ENST00000438571 CNBD1Q8NA66 436 aa24.2■■□□□ 1.46
GTF3A-204ENST00000438571 C21orf2O43822 256 aa24.19■■□□□ 1.46
GTF3A-204ENST00000438571 APLP1P51693 650 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms