RNA–Protein interactions for RNA: ENST00000438393.5

BRD1-204, Transcript of bromodomain containing 1, humanhuman

TSL 2

Gene BRD1, Length 3,051 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-204ENST00000438393 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
BRD1-204ENST00000438393 DDX11L8A8MPP1 907 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
BRD1-204ENST00000438393 GAS2L3Q86XJ1 694 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 ATRNO75882 1429 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 KCNQ4P56696 695 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 RBM6P78332 1123 aaKnown RBP16.36■□□□□ 0.21
BRD1-204ENST00000438393 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 RLBP1P12271 317 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
BRD1-204ENST00000438393 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
BRD1-204ENST00000438393 CDCA7Q9BWT1 371 aaPredicted RBP16.34■□□□□ 0.21
BRD1-204ENST00000438393 IFT57Q9NWB7 429 aa16.34■□□□□ 0.21
BRD1-204ENST00000438393 TNS2Q63HR2 1409 aa16.34■□□□□ 0.21
BRD1-204ENST00000438393 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
BRD1-204ENST00000438393 PIGBQ92521 554 aa16.34■□□□□ 0.21
BRD1-204ENST00000438393 CHL1O00533 1208 aa16.33■□□□□ 0.21
BRD1-204ENST00000438393 HSP90AB1P08238 724 aaKnown RBP16.33■□□□□ 0.21
BRD1-204ENST00000438393 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.21
BRD1-204ENST00000438393 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.21
BRD1-204ENST00000438393 TNNQ9UQP3 1299 aa16.33■□□□□ 0.21
BRD1-204ENST00000438393 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
BRD1-204ENST00000438393 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.2
BRD1-204ENST00000438393 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
BRD1-204ENST00000438393 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
BRD1-204ENST00000438393 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 ANXA1P04083 346 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 TWISTNBQ3B726 338 aaPredicted RBP16.31■□□□□ 0.2
BRD1-204ENST00000438393 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
BRD1-204ENST00000438393 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
BRD1-204ENST00000438393 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
BRD1-204ENST00000438393 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
BRD1-204ENST00000438393 TRIM37O94972 964 aa16.3■□□□□ 0.2
BRD1-204ENST00000438393 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
BRD1-204ENST00000438393 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
BRD1-204ENST00000438393 ZNF330Q9Y3S2 320 aaPredicted RBP16.29■□□□□ 0.2
BRD1-204ENST00000438393 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
BRD1-204ENST00000438393 SHANK3Q9BYB0 1731 aa16.29■□□□□ 0.2
BRD1-204ENST00000438393 MFAP1P55081 439 aaKnown RBP16.28■□□□□ 0.2
BRD1-204ENST00000438393 IL16Q14005 1332 aa16.28■□□□□ 0.2
BRD1-204ENST00000438393 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
BRD1-204ENST00000438393 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
BRD1-204ENST00000438393 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
BRD1-204ENST00000438393 PPP1R9BQ96SB3 815 aa16.27■□□□□ 0.2
BRD1-204ENST00000438393 ONECUT3O60422 494 aaPredicted RBP16.27■□□□□ 0.2
BRD1-204ENST00000438393 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
BRD1-204ENST00000438393 SMC4Q9NTJ3 1288 aa16.27■□□□□ 0.2
BRD1-204ENST00000438393 PRDM4Q9UKN5 801 aa16.27■□□□□ 0.2
BRD1-204ENST00000438393 ERVV-2B6SEH9 535 aa16.27■□□□□ 0.19
BRD1-204ENST00000438393 HSCBQ8IWL3 235 aa16.27■□□□□ 0.19
BRD1-204ENST00000438393 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
BRD1-204ENST00000438393 SMC5Q8IY18 1101 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 SSH1Q8WYL5 1049 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 SNX21Q969T3 373 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 VAMP4O75379 141 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 ATG3Q9NT62 314 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 OFD1O75665 1012 aa16.25■□□□□ 0.19
BRD1-204ENST00000438393 RGS12O14924 1447 aa16.25■□□□□ 0.19
BRD1-204ENST00000438393 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
BRD1-204ENST00000438393 RAB3GAP1Q15042 981 aa16.25■□□□□ 0.19
BRD1-204ENST00000438393 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
BRD1-204ENST00000438393 MYL6BP14649 208 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
BRD1-204ENST00000438393 TERF1P54274 439 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
BRD1-204ENST00000438393 TOGARAM1Q9Y4F4 1720 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 WNK3Q9BYP7 1800 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 ZSCAN30Q86W11 494 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
BRD1-204ENST00000438393 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
BRD1-204ENST00000438393 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 AIMP1Q12904 312 aaKnown RBP16.21■□□□□ 0.19
BRD1-204ENST00000438393 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 BCL9O00512 1426 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 GBP4Q96PP9 640 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 A1BGP04217 495 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 G2E3Q7L622 706 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 HDAC1Q13547 482 aaPredicted RBP16.2■□□□□ 0.18
BRD1-204ENST00000438393 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
BRD1-204ENST00000438393 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms