RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 EPHX2P34913 555 aa13.34□□□□□ -0.27
RPE-209ENST00000438191 RC3H1Q5TC82 1133 aaKnown RBP13.34□□□□□ -0.27
RPE-209ENST00000438191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.34□□□□□ -0.277e-7■□□□□ 9.5
RPE-209ENST00000438191 HACL1Q9UJ83 578 aa13.34□□□□□ -0.27
RPE-209ENST00000438191 ASAP1Q9ULH1 1129 aa13.34□□□□□ -0.27
RPE-209ENST00000438191 TM4SF1P30408 202 aa13.33□□□□□ -0.28
RPE-209ENST00000438191 CST9Q5W186 159 aa13.33□□□□□ -0.28
RPE-209ENST00000438191 CIAPIN1Q6FI81 312 aa13.33□□□□□ -0.28
RPE-209ENST00000438191 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.28
RPE-209ENST00000438191 SRP68Q9UHB9 627 aaKnown RBP13.33□□□□□ -0.28
RPE-209ENST00000438191 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
RPE-209ENST00000438191 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.28
RPE-209ENST00000438191 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
RPE-209ENST00000438191 RAPGEF4Q8WZA2 1011 aa13.32□□□□□ -0.28
RPE-209ENST00000438191 NRXN2Q9P2S2 1712 aa13.32□□□□□ -0.28
RPE-209ENST00000438191 KDRP35968 1356 aa13.32□□□□□ -0.28
RPE-209ENST00000438191 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
RPE-209ENST00000438191 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
RPE-209ENST00000438191 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
RPE-209ENST00000438191 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
RPE-209ENST00000438191 MAP3K19Q56UN5 1328 aa13.31□□□□□ -0.28
RPE-209ENST00000438191 CNTNAP4Q9C0A0 1308 aa13.31□□□□□ -0.28
RPE-209ENST00000438191 USHBP1Q8N6Y0 703 aa13.3□□□□□ -0.28
RPE-209ENST00000438191 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
RPE-209ENST00000438191 USP42Q9H9J4 1324 aaKnown RBP13.3□□□□□ -0.28
RPE-209ENST00000438191 SZT2Q5T011 3432 aa13.29□□□□□ -0.28
RPE-209ENST00000438191 C21orf2O43822 256 aa13.29□□□□□ -0.28
RPE-209ENST00000438191 HOXC9P31274 260 aa13.29□□□□□ -0.28
RPE-209ENST00000438191 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
RPE-209ENST00000438191 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
RPE-209ENST00000438191 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
RPE-209ENST00000438191 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
RPE-209ENST00000438191 TAOK3Q9H2K8 898 aa13.28□□□□□ -0.28
RPE-209ENST00000438191 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
RPE-209ENST00000438191 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
RPE-209ENST00000438191 INSRP06213 1382 aa13.28□□□□□ -0.28
RPE-209ENST00000438191 SAPCD2Q86UD0 394 aa13.27□□□□□ -0.29
RPE-209ENST00000438191 HHIPL1Q96JK4 782 aa13.27□□□□□ -0.29
RPE-209ENST00000438191 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.29
RPE-209ENST00000438191 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
RPE-209ENST00000438191 ZNF541Q9H0D2 1346 aa13.27□□□□□ -0.29
RPE-209ENST00000438191 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
RPE-209ENST00000438191 A0A0C4DFX4 3053 aa13.27□□□□□ -0.29
RPE-209ENST00000438191 H0YIN7 160 aa13.26□□□□□ -0.29
RPE-209ENST00000438191 RNF123Q5XPI4 1314 aa13.26□□□□□ -0.29
RPE-209ENST00000438191 ZIC5Q96T25 663 aa13.26□□□□□ -0.29
RPE-209ENST00000438191 TRAF5O00463 557 aa13.25□□□□□ -0.29
RPE-209ENST00000438191 SAGE1Q9NXZ1 904 aa13.24□□□□□ -0.29
RPE-209ENST00000438191 CARMIL3Q8ND23 1372 aa13.23□□□□□ -0.29
RPE-209ENST00000438191 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
RPE-209ENST00000438191 AMPHP49418 695 aa13.22□□□□□ -0.29
RPE-209ENST00000438191 NOGQ13253 232 aa13.22□□□□□ -0.29
RPE-209ENST00000438191 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
RPE-209ENST00000438191 ANKRD31Q8N7Z5 1873 aa13.22□□□□□ -0.29
RPE-209ENST00000438191 COL11A2P13942 1736 aaPredicted RBP13.22□□□□□ -0.29
RPE-209ENST00000438191 NFIXQ14938 502 aa13.21□□□□□ -0.29
RPE-209ENST00000438191 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
RPE-209ENST00000438191 CACNA1SQ13698 1873 aa13.21□□□□□ -0.3
RPE-209ENST00000438191 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
RPE-209ENST00000438191 TRIOBPQ9H2D6 2365 aa13.2□□□□□ -0.3
RPE-209ENST00000438191 SERPINB2P05120 415 aa13.2□□□□□ -0.3
RPE-209ENST00000438191 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
RPE-209ENST00000438191 MKI67P46013 3256 aaKnown RBP13.19□□□□□ -0.3
RPE-209ENST00000438191 COL6A3P12111 3177 aa13.19□□□□□ -0.3
RPE-209ENST00000438191 FBLN1P23142 703 aa13.19□□□□□ -0.3
RPE-209ENST00000438191 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
RPE-209ENST00000438191 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
RPE-209ENST00000438191 PPARGC1BQ86YN6 1023 aaKnown RBP13.19□□□□□ -0.3
RPE-209ENST00000438191 AKAP11Q9UKA4 1901 aa13.19□□□□□ -0.3
RPE-209ENST00000438191 ARFGEF2Q9Y6D5 1785 aa13.18□□□□□ -0.3
RPE-209ENST00000438191 TRPA1O75762 1119 aa13.18□□□□□ -0.3
RPE-209ENST00000438191 CELF2O95319 508 aaKnown RBP13.18□□□□□ -0.3
RPE-209ENST00000438191 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
RPE-209ENST00000438191 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
RPE-209ENST00000438191 RNF186Q9NXI6 227 aa13.18□□□□□ -0.3
RPE-209ENST00000438191 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
RPE-209ENST00000438191 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
RPE-209ENST00000438191 ZPR1O75312 459 aa13.16□□□□□ -0.3
RPE-209ENST00000438191 GPC2Q8N158 579 aa13.16□□□□□ -0.3
RPE-209ENST00000438191 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
RPE-209ENST00000438191 FZD9O00144 591 aa13.15□□□□□ -0.3
RPE-209ENST00000438191 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
RPE-209ENST00000438191 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
RPE-209ENST00000438191 COL25A1Q9BXS0 654 aaPredicted RBP13.14□□□□□ -0.31
RPE-209ENST00000438191 TJP1Q07157 1748 aa13.13□□□□□ -0.31
RPE-209ENST00000438191 BCORQ6W2J9 1755 aa13.13□□□□□ -0.31
RPE-209ENST00000438191 FAM155AB1AL88 458 aaPredicted RBP13.13□□□□□ -0.31
RPE-209ENST00000438191 EPS15P42566 896 aa13.13□□□□□ -0.31
RPE-209ENST00000438191 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
RPE-209ENST00000438191 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
RPE-209ENST00000438191 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
RPE-209ENST00000438191 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
RPE-209ENST00000438191 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
RPE-209ENST00000438191 RBBP6Q7Z6E9 1792 aaKnown RBP13.12□□□□□ -0.31
RPE-209ENST00000438191 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
RPE-209ENST00000438191 LMOD1P29536 600 aaPredicted RBP13.12□□□□□ -0.31
RPE-209ENST00000438191 PDE6BP35913 854 aa13.12□□□□□ -0.31
RPE-209ENST00000438191 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
RPE-209ENST00000438191 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
RPE-209ENST00000438191 FBXO46Q6PJ61 603 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms