RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 TUBGCP6Q96RT7 1819 aa6.15□□□□□ -1.43
LINC01239-202ENST00000436786 PPM1GO15355 546 aaPredicted RBP6.14□□□□□ -1.43
LINC01239-202ENST00000436786 NSD3Q9BZ95 1437 aa6.14□□□□□ -1.43
LINC01239-202ENST00000436786 KIF24Q5T7B8 1368 aa6.14□□□□□ -1.43
LINC01239-202ENST00000436786 PALLDQ8WX93 1383 aa6.14□□□□□ -1.43
LINC01239-202ENST00000436786 YBX3P16989 372 aaKnown RBP eCLIP6.14□□□□□ -1.43
LINC01239-202ENST00000436786 KAT6BQ8WYB5 2073 aa6.14□□□□□ -1.43
LINC01239-202ENST00000436786 C1QTNF8P60827 252 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 SMIM5Q71RC9 77 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 AMIGO3Q86WK7 504 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 PIGBQ92521 554 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 KIF20BQ96Q89 1820 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 WASHC2AQ641Q2 1341 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 NKX1-1Q15270 411 aaPredicted RBP6.13□□□□□ -1.43
LINC01239-202ENST00000436786 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
LINC01239-202ENST00000436786 EYA1Q99502 592 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 SPG7Q9UQ90 795 aa6.13□□□□□ -1.43
LINC01239-202ENST00000436786 FLAD1Q8NFF5 587 aa6.12□□□□□ -1.43
LINC01239-202ENST00000436786 POLKQ9UBT6 870 aa6.12□□□□□ -1.43
LINC01239-202ENST00000436786 NCAPD2Q15021 1401 aa6.12□□□□□ -1.43
LINC01239-202ENST00000436786 C5P01031 1676 aa6.12□□□□□ -1.43
LINC01239-202ENST00000436786 SENP3-EIF4A1A0A087X0R7 540 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 GRIN3BO60391 1043 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 HMGB2P26583 209 aaKnown RBP6.11□□□□□ -1.43
LINC01239-202ENST00000436786 TNNT2P45379 298 aaPredicted RBP6.11□□□□□ -1.43
LINC01239-202ENST00000436786 AK7Q96M32 723 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 POLR3GLQ9BT43 218 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 CD2APQ9Y5K6 639 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 TOGARAM1Q9Y4F4 1720 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 CHD4Q14839 1912 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 ARHGAP33O14559 1287 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 PHF14O94880 888 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 LINC00116Q8NCU8 138 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 KCTD12Q96CX2 325 aaKnown RBP6.11□□□□□ -1.43
LINC01239-202ENST00000436786 ASAP1Q9ULH1 1129 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 TIMELESSQ9UNS1 1208 aa6.11□□□□□ -1.43
LINC01239-202ENST00000436786 C4BP0C0L5 1744 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.1□□□□□ -1.43
LINC01239-202ENST00000436786 LOC102724428A0A0B4J2F2 783 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 GIGYF1O75420 1035 aaPredicted RBP6.1□□□□□ -1.43
LINC01239-202ENST00000436786 PHKG2P15735 406 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 SIK1P57059 783 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 ITPK1Q13572 414 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 TMOD3Q9NYL9 352 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 PKD1L3Q7Z443 1732 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 EIF4A2Q14240 407 aaKnown RBP6.1□□□□□ -1.43
LINC01239-202ENST00000436786 IFNL2Q8IZJ0 200 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 PCGF6Q9BYE7 350 aa6.1□□□□□ -1.43
LINC01239-202ENST00000436786 ATP6V1AP38606 617 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 ATG3Q9NT62 314 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 ANKRD26Q9UPS8 1709 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 ITGB4P16144 1822 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 TAF1LQ8IZX4 1826 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 GNPATO15228 680 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 SSFA2P28290 1259 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 PANK3Q9H999 370 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 WWC3Q9ULE0 1092 aa6.09□□□□□ -1.43
LINC01239-202ENST00000436786 ATP10DQ9P241 1426 aa6.08□□□□□ -1.44
LINC01239-202ENST00000436786 IGSF1Q8N6C5 1336 aa6.08□□□□□ -1.44
LINC01239-202ENST00000436786 MAP2P11137 1827 aaKnown RBP6.08□□□□□ -1.44
LINC01239-202ENST00000436786 HSPA5P11021 654 aaKnown RBP6.08□□□□□ -1.44
LINC01239-202ENST00000436786 TRAF7Q6Q0C0 670 aa6.08□□□□□ -1.44
LINC01239-202ENST00000436786 SLC4A9Q96Q91 983 aa6.08□□□□□ -1.44
LINC01239-202ENST00000436786 UBR3Q6ZT12 1888 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 ERVV-2B6SEH9 535 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 CLSPNQ9HAW4 1339 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 UTRNP46939 3433 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 MMP10P09238 476 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 EIF4G2P78344 907 aaKnown RBP eCLIP6.07□□□□□ -1.44
LINC01239-202ENST00000436786 PLEKHO1Q53GL0 409 aaPredicted RBP6.07□□□□□ -1.44
LINC01239-202ENST00000436786 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 ZNF530Q6P9A1 599 aaPredicted RBP6.07□□□□□ -1.44
LINC01239-202ENST00000436786 MICALL2Q8IY33 904 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 ZNF526Q8TF50 670 aaPredicted RBP6.07□□□□□ -1.44
LINC01239-202ENST00000436786 DCAF5Q96JK2 942 aa6.07□□□□□ -1.44
LINC01239-202ENST00000436786 KDRP35968 1356 aa6.06□□□□□ -1.44
LINC01239-202ENST00000436786 CABP4P57796 275 aa6.06□□□□□ -1.44
LINC01239-202ENST00000436786 MORC1Q86VD1 984 aa6.06□□□□□ -1.44
LINC01239-202ENST00000436786 AEBP1Q8IUX7 1158 aa6.06□□□□□ -1.44
LINC01239-202ENST00000436786 GPBP1L1Q9HC44 474 aaPredicted RBP6.06□□□□□ -1.44
LINC01239-202ENST00000436786 RTCBQ9Y3I0 505 aaKnown RBP6.06□□□□□ -1.44
LINC01239-202ENST00000436786 ADCY9O60503 1353 aa6.06□□□□□ -1.44
LINC01239-202ENST00000436786 KDM6AO15550 1401 aaPredicted RBP6.05□□□□□ -1.44
LINC01239-202ENST00000436786 HRO43593 1189 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 HSP90AB1P08238 724 aaKnown RBP6.05□□□□□ -1.44
LINC01239-202ENST00000436786 AMOTQ4VCS5 1084 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 RC3H1Q5TC82 1133 aaKnown RBP6.05□□□□□ -1.44
LINC01239-202ENST00000436786 ARHGEF1Q92888 912 aaKnown RBP6.05□□□□□ -1.44
LINC01239-202ENST00000436786 PLEKHG2Q9H7P9 1386 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 A0A0G2JLW4 131 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 MTHFSP49914 203 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 SULT6B1Q6IMI4 303 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 NLGN1Q8N2Q7 840 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 CNTNAP4Q9C0A0 1308 aa6.05□□□□□ -1.44
LINC01239-202ENST00000436786 PTCD1O75127 700 aaKnown RBP6.04□□□□□ -1.44
LINC01239-202ENST00000436786 RPS6KA4O75676 772 aa6.04□□□□□ -1.44
LINC01239-202ENST00000436786 GYS1P13807 737 aa6.04□□□□□ -1.44
LINC01239-202ENST00000436786 RFC4P35249 363 aa6.04□□□□□ -1.44
LINC01239-202ENST00000436786 NFATC2IPQ8NCF5 419 aa6.04□□□□□ -1.44
LINC01239-202ENST00000436786 PXDNLA1KZ92 1463 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms