RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CENPBP07199 599 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-208ENST00000436638 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
ECHDC1-208ENST00000436638 BEGAINQ9BUH8 593 aa8.42□□□□□ -1.06
ECHDC1-208ENST00000436638 ATP7BP35670 1465 aa8.42□□□□□ -1.06
ECHDC1-208ENST00000436638 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 KIF1AQ12756 1690 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 ACEP12821 1306 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 MS4A1P11836 297 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 GGCXP38435 758 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 USP46P62068 366 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 KRT28Q7Z3Y7 464 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 SLC12A5Q9H2X9 1139 aa8.41□□□□□ -1.06
ECHDC1-208ENST00000436638 KIF7Q2M1P5 1343 aa8.4□□□□□ -1.06
ECHDC1-208ENST00000436638 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
ECHDC1-208ENST00000436638 SPSB2Q99619 263 aa8.4□□□□□ -1.06
ECHDC1-208ENST00000436638 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-208ENST00000436638 ROBO1Q9Y6N7 1651 aa8.4□□□□□ -1.07
ECHDC1-208ENST00000436638 USP32Q8NFA0 1604 aa8.4□□□□□ -1.07
ECHDC1-208ENST00000436638 CCDC7Q96M83 1385 aa8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 C11orf95C9JLR9 678 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 HOXA2O43364 376 aa8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 FMNL1O95466 1100 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 ADH1BP00325 375 aa8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 DDX17Q92841 729 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 HLA-CQ95604 372 aa8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 LRRC59Q96AG4 307 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 RGPD8O14715 1765 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-208ENST00000436638 KTN1Q86UP2 1357 aaKnown RBP8.38□□□□□ -1.07
ECHDC1-208ENST00000436638 HSPA1LP34931 641 aa8.38□□□□□ -1.07
ECHDC1-208ENST00000436638 POLR3AO14802 1390 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 BRD4O60885 1362 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 ANKRD36BQ8N2N9 1353 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 SOS2Q07890 1332 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 WASHC2AQ641Q2 1341 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 S1PR4O95977 384 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 Q3C1V9 767 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 SLC6A16Q9GZN6 736 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 PANK3Q9H999 370 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 PHLPP1O60346 1717 aa8.37□□□□□ -1.07
ECHDC1-208ENST00000436638 SBNO1A3KN83 1393 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 AHDC1Q5TGY3 1603 aaPredicted RBP8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 TTC21AQ8NDW8 1320 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 BRICD5Q6PL45 260 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 RNF19BQ6ZMZ0 732 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.36□□□□□ -1.075e-7■■■□□ 18.9
ECHDC1-208ENST00000436638 ABTB2Q8N961 1025 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 THAP11Q96EK4 314 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 TBC1D2Q9BYX2 928 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 KNSTRNQ9Y448 316 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 USP6P35125 1406 aa8.36□□□□□ -1.07
ECHDC1-208ENST00000436638 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 ARHGEF10O15013 1369 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 SPATA31A3Q5VYP0 1347 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 NDUFV2P19404 249 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 NHSL1Q5SYE7 1610 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 CPSF1Q10570 1443 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 EDC4Q6P2E9 1401 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 JCADQ9P266 1359 aa8.35□□□□□ -1.07
ECHDC1-208ENST00000436638 PXDNQ92626 1479 aa8.34□□□□□ -1.07
ECHDC1-208ENST00000436638 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
ECHDC1-208ENST00000436638 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
ECHDC1-208ENST00000436638 FDX1P10109 184 aa8.34□□□□□ -1.07
ECHDC1-208ENST00000436638 DDX10Q13206 875 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-208ENST00000436638 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
ECHDC1-208ENST00000436638 TNS3Q68CZ2 1445 aa8.34□□□□□ -1.07
ECHDC1-208ENST00000436638 CGNL1Q0VF96 1302 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 RNF223E7ERA6 249 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 RGS20O76081 388 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 NEUROD2Q15784 382 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 NUTM2GQ5VZR2 741 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 FAM160A2Q8N612 972 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 COG3Q96JB2 828 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 NSD3Q9BZ95 1437 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 AKAP12Q02952 1782 aa8.33□□□□□ -1.08
ECHDC1-208ENST00000436638 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 MEX3CQ5U5Q3 659 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 NME9Q86XW9 330 aa8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 DHX37Q8IY37 1157 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 CARD14Q9BXL6 1004 aa8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 CCDC9Q9Y3X0 531 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 COL16A1Q07092 1604 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 MON2Q7Z3U7 1717 aa8.32□□□□□ -1.08
ECHDC1-208ENST00000436638 SPATA31A6Q5VVP1 1343 aa8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 MYOM1P52179 1685 aa8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 BRPF1P55201 1214 aaPredicted RBP8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 CNGB1Q14028 1251 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms