RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 BTBD11A6QL63 1104 aa22.79■■□□□ 1.24
CLK1-205ENST00000434813 TSHZ3Q63HK5 1081 aa22.78■■□□□ 1.24
CLK1-205ENST00000434813 BRINP3Q76B58 766 aa22.78■■□□□ 1.24
CLK1-205ENST00000434813 KCNQ3O43525 872 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 DNAAF4Q8WXU2 420 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 ESYT1Q9BSJ8 1104 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 RNMTO43148 476 aaKnown RBP22.77■■□□□ 1.24
CLK1-205ENST00000434813 RAB11FIP3O75154 756 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 ZC3H6P61129 1189 aaKnown RBP22.77■■□□□ 1.24
CLK1-205ENST00000434813 C1orf141Q5JVX7 400 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 BEND3Q5T5X7 828 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 MPRIPQ6WCQ1 1025 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 ANKRD24Q8TF21 1146 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 GZF1Q9H116 711 aaPredicted RBP22.77■■□□□ 1.24
CLK1-205ENST00000434813 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
CLK1-205ENST00000434813 ADCY9O60503 1353 aa22.76■■□□□ 1.23
CLK1-205ENST00000434813 SSFA2P28290 1259 aa22.75■■□□□ 1.23
CLK1-205ENST00000434813 SKOR2Q2VWA4 1001 aaPredicted RBP22.75■■□□□ 1.23
CLK1-205ENST00000434813 PPP1R42Q7Z4L9 355 aa22.75■■□□□ 1.23
CLK1-205ENST00000434813 HEG1Q9ULI3 1381 aa22.75■■□□□ 1.23
CLK1-205ENST00000434813 SPATA31A3Q5VYP0 1347 aa22.75■■□□□ 1.23
CLK1-205ENST00000434813 PI4KAP2A4QPH2 592 aa22.74■■□□□ 1.23
CLK1-205ENST00000434813 PI4KAP1Q8N8J0 262 aa22.74■■□□□ 1.23
CLK1-205ENST00000434813 ISY1Q9ULR0 285 aaKnown RBP22.74■■□□□ 1.23
CLK1-205ENST00000434813 CHMLP26374 656 aa22.74■■□□□ 1.23
CLK1-205ENST00000434813 DBF4Q9UBU7 674 aaPredicted RBP22.74■■□□□ 1.23
CLK1-205ENST00000434813 NUCB2P80303 420 aa22.73■■□□□ 1.23
CLK1-205ENST00000434813 RTN4Q9NQC3 1192 aaKnown RBP22.73■■□□□ 1.23
CLK1-205ENST00000434813 AXIN2Q9Y2T1 843 aa22.73■■□□□ 1.23
CLK1-205ENST00000434813 CWC22Q9HCG8 908 aaKnown RBP22.72■■□□□ 1.23
CLK1-205ENST00000434813 CYP2E1P05181 493 aaPredicted RBP22.72■■□□□ 1.23
CLK1-205ENST00000434813 NBPF7P0C2Y1 421 aaPredicted RBP22.72■■□□□ 1.23
CLK1-205ENST00000434813 TRIM6-TRIM34B2RNG4 842 aa22.71■■□□□ 1.23
CLK1-205ENST00000434813 SRGAP3O43295 1099 aa22.71■■□□□ 1.23
CLK1-205ENST00000434813 SURF6O75683 361 aaKnown RBP22.71■■□□□ 1.23
CLK1-205ENST00000434813 XRCC6P12956 609 aaKnown RBP eCLIP22.71■■□□□ 1.23
CLK1-205ENST00000434813 RGPD5Q99666 1765 aa22.71■■□□□ 1.23
CLK1-205ENST00000434813 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
CLK1-205ENST00000434813 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.23
CLK1-205ENST00000434813 MCCP23508 829 aa22.7■■□□□ 1.23
CLK1-205ENST00000434813 ANAPC15P60006 121 aa22.7■■□□□ 1.23
CLK1-205ENST00000434813 RHPN1Q8TCX5 695 aa22.7■■□□□ 1.23
CLK1-205ENST00000434813 CABLES1Q8TDN4 633 aa22.7■■□□□ 1.23
CLK1-205ENST00000434813 RILPL2Q969X0 211 aa22.7■■□□□ 1.23
CLK1-205ENST00000434813 IL1RAPL2Q9NP60 686 aa22.7■■□□□ 1.23
CLK1-205ENST00000434813 ERBB3P21860 1342 aa22.7■■□□□ 1.22
CLK1-205ENST00000434813 EPB41L2O43491 1005 aaKnown RBP22.7■■□□□ 1.22
CLK1-205ENST00000434813 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
CLK1-205ENST00000434813 KIF1BPQ96EK5 621 aa22.7■■□□□ 1.22
CLK1-205ENST00000434813 IL17RAQ96F46 866 aa22.7■■□□□ 1.22
CLK1-205ENST00000434813 AK9Q5TCS8 1911 aa22.69■■□□□ 1.22
CLK1-205ENST00000434813 BAG4O95429 457 aaKnown RBP22.69■■□□□ 1.22
CLK1-205ENST00000434813 ANXA1P04083 346 aa22.69■■□□□ 1.22
CLK1-205ENST00000434813 MTX1Q13505 466 aa22.69■■□□□ 1.22
CLK1-205ENST00000434813 UNC5CLQ8IV45 518 aa22.69■■□□□ 1.22
CLK1-205ENST00000434813 MRE11P49959 708 aa22.68■■□□□ 1.22
CLK1-205ENST00000434813 HSP90AB4PQ58FF6 505 aa22.68■■□□□ 1.22
CLK1-205ENST00000434813 ABCC6O95255 1503 aa22.68■■□□□ 1.22
CLK1-205ENST00000434813 ALDH1L1O75891 902 aa22.67■■□□□ 1.22
CLK1-205ENST00000434813 PI4K2BQ8TCG2 481 aa22.67■■□□□ 1.22
CLK1-205ENST00000434813 MCM2P49736 904 aa22.67■■□□□ 1.22
CLK1-205ENST00000434813 NUTM1Q86Y26 1132 aa22.67■■□□□ 1.22
CLK1-205ENST00000434813 ANO2Q9NQ90 1003 aa22.67■■□□□ 1.22
CLK1-205ENST00000434813 TOM1O60784 492 aa22.66■■□□□ 1.22
CLK1-205ENST00000434813 FAM43AQ8N2R8 423 aa22.65■■□□□ 1.22
CLK1-205ENST00000434813 SOS2Q07890 1332 aaPredicted RBP22.65■■□□□ 1.22
CLK1-205ENST00000434813 SCN11AQ9UI33 1791 aa22.65■■□□□ 1.22
CLK1-205ENST00000434813 KSR2Q6VAB6 950 aa22.65■■□□□ 1.22
CLK1-205ENST00000434813 MAP3K2Q9Y2U5 619 aa22.65■■□□□ 1.22
CLK1-205ENST00000434813 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
CLK1-205ENST00000434813 UBAP1LF5GYI3 381 aa22.64■■□□□ 1.22
CLK1-205ENST00000434813 NEK4P51957 841 aa22.64■■□□□ 1.22
CLK1-205ENST00000434813 PROSER3Q2NL68 480 aa22.64■■□□□ 1.22
CLK1-205ENST00000434813 ZGPATQ8N5A5 531 aaKnown RBP22.64■■□□□ 1.22
CLK1-205ENST00000434813 ARXQ96QS3 562 aa22.64■■□□□ 1.22
CLK1-205ENST00000434813 NLRP2Q9NX02 1062 aa22.64■■□□□ 1.21
CLK1-205ENST00000434813 HYPKQ9NX55 129 aa22.64■■□□□ 1.21
CLK1-205ENST00000434813 PALD1Q9ULE6 856 aa22.64■■□□□ 1.21
CLK1-205ENST00000434813 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
CLK1-205ENST00000434813 GRPEL1Q9HAV7 217 aa22.63■■□□□ 1.21
CLK1-205ENST00000434813 CPDO75976 1380 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 PLEKHG2Q9H7P9 1386 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 KLHL40Q2TBA0 621 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 HDAC5Q9UQL6 1122 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 COL18A1P39060 1754 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 C5P01031 1676 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 CHRNA2Q15822 529 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 TMX3Q96JJ7 454 aa22.62■■□□□ 1.21
CLK1-205ENST00000434813 KDM6AO15550 1401 aaPredicted RBP22.61■■□□□ 1.21
CLK1-205ENST00000434813 TTC41PQ6P2S7 1318 aa22.61■■□□□ 1.21
CLK1-205ENST00000434813 PKP1Q13835 747 aa22.61■■□□□ 1.21
CLK1-205ENST00000434813 RAPGEF4Q8WZA2 1011 aa22.61■■□□□ 1.21
CLK1-205ENST00000434813 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
CLK1-205ENST00000434813 PANK2Q9BZ23 570 aa22.6■■□□□ 1.21
CLK1-205ENST00000434813 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
CLK1-205ENST00000434813 C9orf78Q9NZ63 289 aaPredicted RBP22.6■■□□□ 1.21
CLK1-205ENST00000434813 CUL4AQ13619 759 aa22.6■■□□□ 1.21
CLK1-205ENST00000434813 CNTROBQ8N137 903 aa22.6■■□□□ 1.21
CLK1-205ENST00000434813 IL25Q9H293 177 aa22.6■■□□□ 1.21
CLK1-205ENST00000434813 UTYO14607 1347 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms