RNA–Protein interactions for RNA: ENST00000433241.5

UBE2F-208, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-208ENST00000433241 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.27
UBE2F-208ENST00000433241 RFC4P35249 363 aa13.33□□□□□ -0.28
UBE2F-208ENST00000433241 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
UBE2F-208ENST00000433241 USP42Q9H9J4 1324 aaKnown RBP13.33□□□□□ -0.28
UBE2F-208ENST00000433241 COL15A1P39059 1388 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 STARD3NLO95772 234 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 YY1P25490 414 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 RIPK4P57078 832 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 CCDC184Q52MB2 194 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 CCDC146Q8IYE0 955 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
UBE2F-208ENST00000433241 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
UBE2F-208ENST00000433241 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
UBE2F-208ENST00000433241 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
UBE2F-208ENST00000433241 EIF5P55010 431 aaKnown RBP13.31□□□□□ -0.28
UBE2F-208ENST00000433241 NLGN2Q8NFZ4 835 aa13.31□□□□□ -0.28
UBE2F-208ENST00000433241 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
UBE2F-208ENST00000433241 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
UBE2F-208ENST00000433241 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
UBE2F-208ENST00000433241 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
UBE2F-208ENST00000433241 MMP10P09238 476 aa13.3□□□□□ -0.28
UBE2F-208ENST00000433241 SNRPA1P09661 255 aaKnown RBP13.3□□□□□ -0.28
UBE2F-208ENST00000433241 CD2APQ9Y5K6 639 aa13.3□□□□□ -0.28
UBE2F-208ENST00000433241 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
UBE2F-208ENST00000433241 CHD4Q14839 1912 aa13.3□□□□□ -0.28
UBE2F-208ENST00000433241 BRCA1P38398 1863 aaKnown RBP13.29□□□□□ -0.28
UBE2F-208ENST00000433241 ANP32CO43423 234 aa13.29□□□□□ -0.28
UBE2F-208ENST00000433241 A1BGP04217 495 aa13.29□□□□□ -0.28
UBE2F-208ENST00000433241 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
UBE2F-208ENST00000433241 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
UBE2F-208ENST00000433241 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
UBE2F-208ENST00000433241 FKBP8Q14318 412 aa13.29□□□□□ -0.28
UBE2F-208ENST00000433241 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
UBE2F-208ENST00000433241 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
UBE2F-208ENST00000433241 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
UBE2F-208ENST00000433241 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
UBE2F-208ENST00000433241 N4BP2Q86UW6 1770 aaPredicted RBP13.29□□□□□ -0.28
UBE2F-208ENST00000433241 TM4SF1P30408 202 aa13.28□□□□□ -0.28
UBE2F-208ENST00000433241 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
UBE2F-208ENST00000433241 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
UBE2F-208ENST00000433241 BCL2L12Q9HB09 334 aa13.28□□□□□ -0.28
UBE2F-208ENST00000433241 BABAM1Q9NWV8 329 aa13.28□□□□□ -0.28
UBE2F-208ENST00000433241 ZPR1O75312 459 aa13.27□□□□□ -0.29
UBE2F-208ENST00000433241 NEUROD2Q15784 382 aa13.27□□□□□ -0.29
UBE2F-208ENST00000433241 C10orf71Q711Q0 1435 aa13.27□□□□□ -0.29
UBE2F-208ENST00000433241 A0A087WZG4 1122 aa13.26□□□□□ -0.29
UBE2F-208ENST00000433241 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
UBE2F-208ENST00000433241 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
UBE2F-208ENST00000433241 DDR1Q08345 913 aa13.26□□□□□ -0.29
UBE2F-208ENST00000433241 NBPF26B4DH59 902 aa13.25□□□□□ -0.29
UBE2F-208ENST00000433241 NBPF10Q6P3W6 841 aaKnown RBP13.25□□□□□ -0.29
UBE2F-208ENST00000433241 NBPF15Q8N660 670 aa13.25□□□□□ -0.29
UBE2F-208ENST00000433241 TSPYL4Q9UJ04 414 aa13.25□□□□□ -0.29
UBE2F-208ENST00000433241 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
UBE2F-208ENST00000433241 PXDNLA1KZ92 1463 aa13.24□□□□□ -0.29
UBE2F-208ENST00000433241 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
UBE2F-208ENST00000433241 CHL1O00533 1208 aa13.24□□□□□ -0.29
UBE2F-208ENST00000433241 APAF1O14727 1248 aa13.24□□□□□ -0.29
UBE2F-208ENST00000433241 PIP4K2AP48426 406 aaPredicted RBP13.24□□□□□ -0.29
UBE2F-208ENST00000433241 NUP98P52948 1817 aa13.24□□□□□ -0.29
UBE2F-208ENST00000433241 DLEC1Q9Y238 1755 aa13.24□□□□□ -0.29
UBE2F-208ENST00000433241 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
UBE2F-208ENST00000433241 NFIXQ14938 502 aa13.23□□□□□ -0.29
UBE2F-208ENST00000433241 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
UBE2F-208ENST00000433241 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
UBE2F-208ENST00000433241 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
UBE2F-208ENST00000433241 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.291e-6■■□□□ 11.6
UBE2F-208ENST00000433241 TGFB2P61812 414 aa13.22□□□□□ -0.29
UBE2F-208ENST00000433241 ARFGEF1Q9Y6D6 1849 aa13.22□□□□□ -0.29
UBE2F-208ENST00000433241 GPR162Q16538 588 aa13.21□□□□□ -0.29
UBE2F-208ENST00000433241 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
UBE2F-208ENST00000433241 ZNF330Q9Y3S2 320 aaPredicted RBP13.21□□□□□ -0.29
UBE2F-208ENST00000433241 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
UBE2F-208ENST00000433241 RGL2O15211 777 aa13.2□□□□□ -0.3
UBE2F-208ENST00000433241 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
UBE2F-208ENST00000433241 TBC1D9BQ66K14 1250 aa13.2□□□□□ -0.3
UBE2F-208ENST00000433241 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
UBE2F-208ENST00000433241 SERPINB2P05120 415 aa13.19□□□□□ -0.3
UBE2F-208ENST00000433241 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
UBE2F-208ENST00000433241 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
UBE2F-208ENST00000433241 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
UBE2F-208ENST00000433241 COL11A2P13942 1736 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-208ENST00000433241 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
UBE2F-208ENST00000433241 KCNA3P22001 575 aa13.18□□□□□ -0.3
UBE2F-208ENST00000433241 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
UBE2F-208ENST00000433241 LRP10Q7Z4F1 713 aa13.18□□□□□ -0.3
UBE2F-208ENST00000433241 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
UBE2F-208ENST00000433241 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
UBE2F-208ENST00000433241 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
UBE2F-208ENST00000433241 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
UBE2F-208ENST00000433241 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
UBE2F-208ENST00000433241 DPEP1P16444 411 aa13.17□□□□□ -0.3
UBE2F-208ENST00000433241 PDIA6Q15084 440 aa13.17□□□□□ -0.3
UBE2F-208ENST00000433241 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
UBE2F-208ENST00000433241 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
UBE2F-208ENST00000433241 HOXB7P09629 217 aa13.16□□□□□ -0.3
UBE2F-208ENST00000433241 GNAI1P63096 354 aa13.16□□□□□ -0.3
UBE2F-208ENST00000433241 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms