RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 PRKAR2BP31323 418 aa30.51■■■□□ 2.47
HOMER3-203ENST00000433218 PARP3Q9Y6F1 533 aa30.51■■■□□ 2.47
HOMER3-203ENST00000433218 USPL1Q5W0Q7 1092 aa30.5■■■□□ 2.47
HOMER3-203ENST00000433218 SBF1O95248 1867 aa30.5■■■□□ 2.47
HOMER3-203ENST00000433218 COL11A2P13942 1736 aaPredicted RBP30.49■■■□□ 2.47
HOMER3-203ENST00000433218 ZNF526Q8TF50 670 aaPredicted RBP30.49■■■□□ 2.47
HOMER3-203ENST00000433218 CEMIPQ8WUJ3 1361 aa30.48■■■□□ 2.47
HOMER3-203ENST00000433218 CACNA1SQ13698 1873 aa30.48■■■□□ 2.47
HOMER3-203ENST00000433218 KCNA3P22001 575 aa30.47■■■□□ 2.47
HOMER3-203ENST00000433218 BCS1LQ9Y276 419 aa30.47■■■□□ 2.47
HOMER3-203ENST00000433218 GNAT3A8MTJ3 354 aa30.47■■■□□ 2.47
HOMER3-203ENST00000433218 POLRMTO00411 1230 aaKnown RBP30.47■■■□□ 2.47
HOMER3-203ENST00000433218 GAS2L2Q8NHY3 880 aa30.47■■■□□ 2.47
HOMER3-203ENST00000433218 ZNF496Q96IT1 587 aaPredicted RBP30.47■■■□□ 2.47
HOMER3-203ENST00000433218 TGFB2P61812 414 aa30.46■■■□□ 2.47
HOMER3-203ENST00000433218 BCL2L12Q9HB09 334 aa30.46■■■□□ 2.47
HOMER3-203ENST00000433218 KCNQ3O43525 872 aa30.45■■■□□ 2.46
HOMER3-203ENST00000433218 HEG1Q9ULI3 1381 aa30.44■■■□□ 2.46
HOMER3-203ENST00000433218 SENP3-EIF4A1A0A087X0R7 540 aa30.44■■■□□ 2.46
HOMER3-203ENST00000433218 CCDC88AQ3V6T2 1871 aa30.43■■■□□ 2.46
HOMER3-203ENST00000433218 CARMIL3Q8ND23 1372 aa30.43■■■□□ 2.46
HOMER3-203ENST00000433218 LAMB4A4D0S4 1761 aa30.43■■■□□ 2.46
HOMER3-203ENST00000433218 CANXP27824 592 aaKnown RBP30.42■■■□□ 2.46
HOMER3-203ENST00000433218 TM4SF1P30408 202 aa30.42■■■□□ 2.46
HOMER3-203ENST00000433218 CHRNA5P30532 468 aa30.42■■■□□ 2.46
HOMER3-203ENST00000433218 TEFQ10587 303 aa30.42■■■□□ 2.46
HOMER3-203ENST00000433218 VSIG10Q8N0Z9 540 aa30.42■■■□□ 2.46
HOMER3-203ENST00000433218 KDM3BQ7LBC6 1761 aa30.42■■■□□ 2.46
HOMER3-203ENST00000433218 ZNF790Q6PG37 636 aa30.41■■■□□ 2.46
HOMER3-203ENST00000433218 TTC5Q8N0Z6 440 aa30.41■■■□□ 2.46
HOMER3-203ENST00000433218 CFAP53Q96M91 514 aa30.41■■■□□ 2.46
HOMER3-203ENST00000433218 NFIXQ14938 502 aa30.4■■■□□ 2.46
HOMER3-203ENST00000433218 NARFQ9UHQ1 456 aa30.4■■■□□ 2.46
HOMER3-203ENST00000433218 ZPR1O75312 459 aa30.39■■■□□ 2.46
HOMER3-203ENST00000433218 FCHSD2O94868 740 aa30.39■■■□□ 2.45
HOMER3-203ENST00000433218 U2AF1L5P0DN76 240 aaPredicted RBP30.39■■■□□ 2.45
HOMER3-203ENST00000433218 U2AF1Q01081 240 aaKnown RBP eCLIP30.39■■■□□ 2.45
HOMER3-203ENST00000433218 MCM10Q7L590 875 aa30.37■■■□□ 2.45
HOMER3-203ENST00000433218 GPBP1L1Q9HC44 474 aaPredicted RBP30.37■■■□□ 2.45
HOMER3-203ENST00000433218 PRAMEF22A3QJZ6 481 aa30.36■■■□□ 2.45
HOMER3-203ENST00000433218 DCTN1Q14203 1278 aa30.36■■■□□ 2.45
HOMER3-203ENST00000433218 TIAM2Q8IVF5 1701 aa30.35■■■□□ 2.45
HOMER3-203ENST00000433218 EIF5P55010 431 aaKnown RBP30.35■■■□□ 2.45
HOMER3-203ENST00000433218 PIP4K2AP48426 406 aaPredicted RBP30.33■■■□□ 2.45
HOMER3-203ENST00000433218 ARHGAP27Q6ZUM4 889 aa30.33■■■□□ 2.45
HOMER3-203ENST00000433218 ZNF330Q9Y3S2 320 aaPredicted RBP30.32■■■□□ 2.44
HOMER3-203ENST00000433218 A1BGP04217 495 aa30.31■■■□□ 2.44
HOMER3-203ENST00000433218 NUDCQ9Y266 331 aa30.31■■■□□ 2.44
HOMER3-203ENST00000433218 BTBD11A6QL63 1104 aa30.3■■■□□ 2.44
HOMER3-203ENST00000433218 BICDL1Q6ZP65 573 aa30.3■■■□□ 2.44
HOMER3-203ENST00000433218 STARD3NLO95772 234 aa30.3■■■□□ 2.44
HOMER3-203ENST00000433218 FMNL2Q96PY5 1086 aa30.3■■■□□ 2.44
HOMER3-203ENST00000433218 PIM2Q9P1W9 311 aa30.3■■■□□ 2.44
HOMER3-203ENST00000433218 ARFGEF2Q9Y6D5 1785 aa30.29■■■□□ 2.44
HOMER3-203ENST00000433218 TBC1D9BQ66K14 1250 aa30.29■■■□□ 2.44
HOMER3-203ENST00000433218 TBC1D2BQ9UPU7 963 aa30.29■■■□□ 2.44
HOMER3-203ENST00000433218 SERPINB2P05120 415 aa30.28■■■□□ 2.44
HOMER3-203ENST00000433218 KIF3CO14782 793 aa30.27■■■□□ 2.44
HOMER3-203ENST00000433218 DALRD3Q5D0E6 543 aaKnown RBP30.27■■■□□ 2.44
HOMER3-203ENST00000433218 CCDC24Q8N4L8 307 aa30.26■■■□□ 2.43
HOMER3-203ENST00000433218 FER1L6Q2WGJ9 1857 aa30.26■■■□□ 2.43
HOMER3-203ENST00000433218 USP16Q9Y5T5 823 aa30.25■■■□□ 2.43
HOMER3-203ENST00000433218 TNRC6CQ9HCJ0 1690 aaKnown RBP30.25■■■□□ 2.43
HOMER3-203ENST00000433218 SLX4Q8IY92 1834 aa30.24■■■□□ 2.43
HOMER3-203ENST00000433218 RASSF7Q02833 373 aa30.23■■■□□ 2.43
HOMER3-203ENST00000433218 C9orf131Q5VYM1 1079 aa30.23■■■□□ 2.43
HOMER3-203ENST00000433218 IL6STP40189 918 aaPredicted RBP30.22■■■□□ 2.43
HOMER3-203ENST00000433218 DICER1Q9UPY3 1922 aaKnown RBP30.22■■■□□ 2.43
HOMER3-203ENST00000433218 NUP98P52948 1817 aa30.22■■■□□ 2.43
HOMER3-203ENST00000433218 CAMTA2O94983 1202 aa30.22■■■□□ 2.43
HOMER3-203ENST00000433218 RTF1Q92541 710 aaKnown RBP30.21■■■□□ 2.43
HOMER3-203ENST00000433218 MIS18AQ9NYP9 233 aa30.21■■■□□ 2.43
HOMER3-203ENST00000433218 PRELPP51888 382 aa30.2■■■□□ 2.42
HOMER3-203ENST00000433218 TEX13AQ9BXU3 409 aaPredicted RBP30.2■■■□□ 2.42
HOMER3-203ENST00000433218 NMRK2Q9NPI5 230 aa30.2■■■□□ 2.42
HOMER3-203ENST00000433218 A0A087WZG4 1122 aa30.19■■■□□ 2.42
HOMER3-203ENST00000433218 PLEKHF1Q96S99 279 aa30.19■■■□□ 2.42
HOMER3-203ENST00000433218 THUMPD2Q9BTF0 503 aaKnown RBP30.19■■■□□ 2.42
HOMER3-203ENST00000433218 PRR5LQ6MZQ0 368 aa30.17■■■□□ 2.42
HOMER3-203ENST00000433218 C2CD5Q86YS7 1000 aa30.17■■■□□ 2.42
HOMER3-203ENST00000433218 NBPF26B4DH59 902 aa30.16■■■□□ 2.42
HOMER3-203ENST00000433218 NBPF10Q6P3W6 841 aaKnown RBP30.16■■■□□ 2.42
HOMER3-203ENST00000433218 NBPF15Q8N660 670 aa30.16■■■□□ 2.42
HOMER3-203ENST00000433218 RNF181Q9P0P0 153 aa30.16■■■□□ 2.42
HOMER3-203ENST00000433218 DZIP3Q86Y13 1208 aaKnown RBP30.15■■■□□ 2.42
HOMER3-203ENST00000433218 SNRPA1P09661 255 aaKnown RBP30.13■■■□□ 2.41
HOMER3-203ENST00000433218 WDR90Q96KV7 1748 aa30.12■■■□□ 2.41
HOMER3-203ENST00000433218 HTATSF1O43719 755 aaKnown RBP30.11■■■□□ 2.41
HOMER3-203ENST00000433218 NFKBIEO00221 500 aa30.09■■■□□ 2.41
HOMER3-203ENST00000433218 HSPA6P17066 643 aa30.09■■■□□ 2.41
HOMER3-203ENST00000433218 TTLL6Q8N841 843 aa30.09■■■□□ 2.41
HOMER3-203ENST00000433218 TAF7Q15545 349 aaPredicted RBP30.08■■■□□ 2.41
HOMER3-203ENST00000433218 NFE2L2Q16236 605 aa30.08■■■□□ 2.41
HOMER3-203ENST00000433218 PCNTO95613 3336 aa30.08■■■□□ 2.41
HOMER3-203ENST00000433218 H0YIN7 160 aa30.07■■■□□ 2.4
HOMER3-203ENST00000433218 CNBD1Q8NA66 436 aa30.07■■■□□ 2.4
HOMER3-203ENST00000433218 ZNF219Q9P2Y4 722 aaPredicted RBP30.07■■■□□ 2.4
HOMER3-203ENST00000433218 ZNF622Q969S3 477 aaKnown RBP eCLIP30.05■■■□□ 2.4
HOMER3-203ENST00000433218 SETDB2Q96T68 719 aa30.05■■■□□ 2.4
HOMER3-203ENST00000433218 BRIP1Q9BX63 1249 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms