RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 COL15A1P39059 1388 aa23.32■■□□□ 1.32
NUP50-208ENST00000430547 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
NUP50-208ENST00000430547 ZBTB1Q9Y2K1 713 aa23.32■■□□□ 1.32
NUP50-208ENST00000430547 GOLGB1Q14789 3259 aaKnown RBP23.32■■□□□ 1.32
NUP50-208ENST00000430547 GRIN3BO60391 1043 aa23.31■■□□□ 1.32
NUP50-208ENST00000430547 MYBBP1AQ9BQG0 1328 aaKnown RBP23.31■■□□□ 1.32
NUP50-208ENST00000430547 N4BP2Q86UW6 1770 aaPredicted RBP23.3■■□□□ 1.32
NUP50-208ENST00000430547 CANXP27824 592 aaKnown RBP23.3■■□□□ 1.32
NUP50-208ENST00000430547 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.32
NUP50-208ENST00000430547 DCTN1Q14203 1278 aa23.29■■□□□ 1.32
NUP50-208ENST00000430547 FKBP8Q14318 412 aa23.28■■□□□ 1.32
NUP50-208ENST00000430547 USPL1Q5W0Q7 1092 aa23.28■■□□□ 1.32
NUP50-208ENST00000430547 C10orf71Q711Q0 1435 aa23.27■■□□□ 1.32
NUP50-208ENST00000430547 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
NUP50-208ENST00000430547 NARFQ9UHQ1 456 aa23.27■■□□□ 1.32
NUP50-208ENST00000430547 KIAA1551Q9HCM1 1747 aa23.26■■□□□ 1.31
NUP50-208ENST00000430547 NFE2L2Q16236 605 aa23.26■■□□□ 1.31
NUP50-208ENST00000430547 PLEKHF1Q96S99 279 aa23.26■■□□□ 1.31
NUP50-208ENST00000430547 ZNF330Q9Y3S2 320 aaPredicted RBP23.26■■□□□ 1.31
NUP50-208ENST00000430547 A0A087WZG4 1122 aa23.25■■□□□ 1.31
NUP50-208ENST00000430547 KCNQ3O43525 872 aa23.25■■□□□ 1.31
NUP50-208ENST00000430547 WWC3Q9ULE0 1092 aa23.25■■□□□ 1.31
NUP50-208ENST00000430547 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
NUP50-208ENST00000430547 TGFB2P61812 414 aa23.24■■□□□ 1.31
NUP50-208ENST00000430547 TAF7Q15545 349 aaPredicted RBP23.24■■□□□ 1.31
NUP50-208ENST00000430547 AFDNP55196 1824 aaKnown RBP23.24■■□□□ 1.31
NUP50-208ENST00000430547 SCN7AQ01118 1682 aa23.23■■□□□ 1.31
NUP50-208ENST00000430547 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
NUP50-208ENST00000430547 KDM3BQ7LBC6 1761 aa23.22■■□□□ 1.31
NUP50-208ENST00000430547 EIF5P55010 431 aaKnown RBP23.22■■□□□ 1.31
NUP50-208ENST00000430547 SNRPA1P09661 255 aaKnown RBP23.21■■□□□ 1.31
NUP50-208ENST00000430547 IL6STP40189 918 aaPredicted RBP23.21■■□□□ 1.31
NUP50-208ENST00000430547 DDR1Q08345 913 aa23.21■■□□□ 1.31
NUP50-208ENST00000430547 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
NUP50-208ENST00000430547 PNISRQ8TF01 805 aaKnown RBP23.21■■□□□ 1.31
NUP50-208ENST00000430547 BRCA1P38398 1863 aaKnown RBP23.21■■□□□ 1.31
NUP50-208ENST00000430547 A0A0G2JLW4 131 aa23.19■■□□□ 1.3
NUP50-208ENST00000430547 POLRMTO00411 1230 aaKnown RBP23.19■■□□□ 1.3
NUP50-208ENST00000430547 A1BGP04217 495 aa23.19■■□□□ 1.3
NUP50-208ENST00000430547 TM4SF1P30408 202 aa23.19■■□□□ 1.3
NUP50-208ENST00000430547 ZNF784Q8NCA9 323 aaPredicted RBP23.19■■□□□ 1.3
NUP50-208ENST00000430547 NFIXQ14938 502 aa23.18■■□□□ 1.3
NUP50-208ENST00000430547 PRKRIP1Q9H875 184 aaPredicted RBP23.18■■□□□ 1.3
NUP50-208ENST00000430547 USP16Q9Y5T5 823 aa23.18■■□□□ 1.3
NUP50-208ENST00000430547 BCORQ6W2J9 1755 aa23.18■■□□□ 1.3
NUP50-208ENST00000430547 NRXN2Q9P2S2 1712 aa23.17■■□□□ 1.3
NUP50-208ENST00000430547 MIS18AQ9NYP9 233 aa23.17■■□□□ 1.3
NUP50-208ENST00000430547 DPEP1P16444 411 aa23.16■■□□□ 1.3
NUP50-208ENST00000430547 RIPK4P57078 832 aa23.16■■□□□ 1.3
NUP50-208ENST00000430547 THUMPD2Q9BTF0 503 aaKnown RBP23.16■■□□□ 1.3
NUP50-208ENST00000430547 BCL2L12Q9HB09 334 aa23.16■■□□□ 1.3
NUP50-208ENST00000430547 TBC1D2BQ9UPU7 963 aa23.16■■□□□ 1.3
NUP50-208ENST00000430547 BCS1LQ9Y276 419 aa23.16■■□□□ 1.3
NUP50-208ENST00000430547 ARFGEF1Q9Y6D6 1849 aa23.15■■□□□ 1.3
NUP50-208ENST00000430547 PRAMEF22A3QJZ6 481 aa23.15■■□□□ 1.3
NUP50-208ENST00000430547 LMOD3Q0VAK6 560 aa23.15■■□□□ 1.3
NUP50-208ENST00000430547 BICDL1Q6ZP65 573 aa23.15■■□□□ 1.3
NUP50-208ENST00000430547 SERPINB2P05120 415 aa23.13■■□□□ 1.29
NUP50-208ENST00000430547 PIP4K2AP48426 406 aaPredicted RBP23.13■■□□□ 1.29
NUP50-208ENST00000430547 DZIP3Q86Y13 1208 aaKnown RBP23.13■■□□□ 1.29
NUP50-208ENST00000430547 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
NUP50-208ENST00000430547 TMPOP42166 694 aaKnown RBP23.12■■□□□ 1.29
NUP50-208ENST00000430547 PIM2Q9P1W9 311 aa23.12■■□□□ 1.29
NUP50-208ENST00000430547 RUNDC1Q96C34 613 aa23.11■■□□□ 1.29
NUP50-208ENST00000430547 DLEC1Q9Y238 1755 aa23.11■■□□□ 1.29
NUP50-208ENST00000430547 TBC1D9BQ66K14 1250 aa23.1■■□□□ 1.29
NUP50-208ENST00000430547 TSPYL4Q9UJ04 414 aa23.1■■□□□ 1.29
NUP50-208ENST00000430547 CARMIL3Q8ND23 1372 aa23.1■■□□□ 1.29
NUP50-208ENST00000430547 NPHP1O15259 732 aa23.09■■□□□ 1.29
NUP50-208ENST00000430547 CAMTA2O94983 1202 aa23.09■■□□□ 1.29
NUP50-208ENST00000430547 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
NUP50-208ENST00000430547 ZNF652Q9Y2D9 606 aa23.09■■□□□ 1.29
NUP50-208ENST00000430547 RRP7AQ9Y3A4 280 aaKnown RBP23.09■■□□□ 1.29
NUP50-208ENST00000430547 CHRNA5P30532 468 aa23.08■■□□□ 1.29
NUP50-208ENST00000430547 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
NUP50-208ENST00000430547 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
NUP50-208ENST00000430547 SETDB2Q96T68 719 aa23.08■■□□□ 1.29
NUP50-208ENST00000430547 ADAMTS8Q9UP79 889 aa23.08■■□□□ 1.29
NUP50-208ENST00000430547 GIGYF1O75420 1035 aaPredicted RBP23.07■■□□□ 1.28
NUP50-208ENST00000430547 KCNA3P22001 575 aa23.07■■□□□ 1.28
NUP50-208ENST00000430547 ANKRD31Q8N7Z5 1873 aa23.07■■□□□ 1.28
NUP50-208ENST00000430547 ARHGAP27Q6ZUM4 889 aa23.06■■□□□ 1.28
NUP50-208ENST00000430547 NBPF26B4DH59 902 aa23.05■■□□□ 1.28
NUP50-208ENST00000430547 NBPF10Q6P3W6 841 aaKnown RBP23.05■■□□□ 1.28
NUP50-208ENST00000430547 NBPF15Q8N660 670 aa23.05■■□□□ 1.28
NUP50-208ENST00000430547 BABAM1Q9NWV8 329 aa23.05■■□□□ 1.28
NUP50-208ENST00000430547 ATP10DQ9P241 1426 aa23.05■■□□□ 1.28
NUP50-208ENST00000430547 ZNF316A6NFI3 1004 aaPredicted RBP23.04■■□□□ 1.28
NUP50-208ENST00000430547 CLEC4GQ6UXB4 293 aa23.04■■□□□ 1.28
NUP50-208ENST00000430547 H0YIN7 160 aa23.03■■□□□ 1.28
NUP50-208ENST00000430547 C2CD5Q86YS7 1000 aa23.03■■□□□ 1.28
NUP50-208ENST00000430547 CNBD1Q8NA66 436 aa23.03■■□□□ 1.28
NUP50-208ENST00000430547 ADCY9O60503 1353 aa23.02■■□□□ 1.28
NUP50-208ENST00000430547 ST5P78524 1137 aa23.02■■□□□ 1.28
NUP50-208ENST00000430547 PRR5LQ6MZQ0 368 aa23.02■■□□□ 1.28
NUP50-208ENST00000430547 NGEFQ8N5V2 710 aa23.02■■□□□ 1.28
NUP50-208ENST00000430547 NUP98P52948 1817 aa23.02■■□□□ 1.28
NUP50-208ENST00000430547 PDE6BP35913 854 aa23.01■■□□□ 1.27
NUP50-208ENST00000430547 PDZRN3Q9UPQ7 1066 aa23.01■■□□□ 1.27
NUP50-208ENST00000430547 CACNA1SQ13698 1873 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms