RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 PHACTR3Q96KR7 559 aa23.5■■□□□ 1.35
RCC1-209ENST00000430407 CYP19A1P11511 503 aaPredicted RBP23.49■■□□□ 1.35
RCC1-209ENST00000430407 TTC5Q8N0Z6 440 aa23.49■■□□□ 1.35
RCC1-209ENST00000430407 POLRMTO00411 1230 aaKnown RBP23.48■■□□□ 1.35
RCC1-209ENST00000430407 TM4SF1P30408 202 aa23.48■■□□□ 1.35
RCC1-209ENST00000430407 C9orf131Q5VYM1 1079 aa23.48■■□□□ 1.35
RCC1-209ENST00000430407 VSIG10Q8N0Z9 540 aa23.48■■□□□ 1.35
RCC1-209ENST00000430407 MYH14Q7Z406 1995 aaKnown RBP23.48■■□□□ 1.35
RCC1-209ENST00000430407 SOS1Q07889 1333 aaPredicted RBP23.48■■□□□ 1.35
RCC1-209ENST00000430407 TOMM70O94826 608 aa23.47■■□□□ 1.35
RCC1-209ENST00000430407 IL17REQ8NFR9 667 aa23.47■■□□□ 1.35
RCC1-209ENST00000430407 ADAMTS7Q9UKP4 1686 aa23.47■■□□□ 1.35
RCC1-209ENST00000430407 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
RCC1-209ENST00000430407 CHRNA5P30532 468 aa23.46■■□□□ 1.35
RCC1-209ENST00000430407 TJP1Q07157 1748 aa23.46■■□□□ 1.35
RCC1-209ENST00000430407 TEFQ10587 303 aa23.46■■□□□ 1.35
RCC1-209ENST00000430407 C16orf71Q8IYS4 520 aaPredicted RBP23.46■■□□□ 1.35
RCC1-209ENST00000430407 NARFQ9UHQ1 456 aa23.46■■□□□ 1.35
RCC1-209ENST00000430407 COL15A1P39059 1388 aa23.45■■□□□ 1.34
RCC1-209ENST00000430407 NEFMP07197 916 aa23.45■■□□□ 1.34
RCC1-209ENST00000430407 ZBTB1Q9Y2K1 713 aa23.45■■□□□ 1.34
RCC1-209ENST00000430407 STARD3NLO95772 234 aa23.44■■□□□ 1.34
RCC1-209ENST00000430407 MYBBP1AQ9BQG0 1328 aaKnown RBP23.43■■□□□ 1.34
RCC1-209ENST00000430407 CANXP27824 592 aaKnown RBP23.43■■□□□ 1.34
RCC1-209ENST00000430407 APLP1P51693 650 aa23.43■■□□□ 1.34
RCC1-209ENST00000430407 PNNQ9H307 717 aaKnown RBP23.43■■□□□ 1.34
RCC1-209ENST00000430407 NMRK2Q9NPI5 230 aa23.43■■□□□ 1.34
RCC1-209ENST00000430407 RNF181Q9P0P0 153 aa23.43■■□□□ 1.34
RCC1-209ENST00000430407 KDM2BQ8NHM5 1336 aa23.42■■□□□ 1.34
RCC1-209ENST00000430407 NFIXQ14938 502 aa23.42■■□□□ 1.34
RCC1-209ENST00000430407 RTF1Q92541 710 aaKnown RBP23.42■■□□□ 1.34
RCC1-209ENST00000430407 CEMIPQ8WUJ3 1361 aa23.41■■□□□ 1.34
RCC1-209ENST00000430407 A0A087WZG4 1122 aa23.41■■□□□ 1.34
RCC1-209ENST00000430407 HTATSF1O43719 755 aaKnown RBP23.4■■□□□ 1.34
RCC1-209ENST00000430407 SERPINB2P05120 415 aa23.4■■□□□ 1.34
RCC1-209ENST00000430407 NPM2Q86SE8 214 aaKnown RBP23.4■■□□□ 1.34
RCC1-209ENST00000430407 TEX13AQ9BXU3 409 aaPredicted RBP23.4■■□□□ 1.34
RCC1-209ENST00000430407 KCPQ6ZWJ8 1503 aa23.39■■□□□ 1.34
RCC1-209ENST00000430407 ZNF790Q6PG37 636 aa23.38■■□□□ 1.33
RCC1-209ENST00000430407 IFFO2Q5TF58 517 aa23.37■■□□□ 1.33
RCC1-209ENST00000430407 BICDL1Q6ZP65 573 aa23.37■■□□□ 1.33
RCC1-209ENST00000430407 RBM46Q8TBY0 533 aaKnown RBP23.37■■□□□ 1.33
RCC1-209ENST00000430407 PLEKHF1Q96S99 279 aa23.37■■□□□ 1.33
RCC1-209ENST00000430407 ZNF330Q9Y3S2 320 aaPredicted RBP23.37■■□□□ 1.33
RCC1-209ENST00000430407 VIRMAQ69YN4 1812 aaKnown RBP23.37■■□□□ 1.33
RCC1-209ENST00000430407 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
RCC1-209ENST00000430407 BCL2L12Q9HB09 334 aa23.36■■□□□ 1.33
RCC1-209ENST00000430407 BRCA1P38398 1863 aaKnown RBP23.35■■□□□ 1.33
RCC1-209ENST00000430407 BTBD11A6QL63 1104 aa23.35■■□□□ 1.33
RCC1-209ENST00000430407 H0YIN7 160 aa23.35■■□□□ 1.33
RCC1-209ENST00000430407 C2CD5Q86YS7 1000 aa23.35■■□□□ 1.33
RCC1-209ENST00000430407 TTLL6Q8N841 843 aa23.35■■□□□ 1.33
RCC1-209ENST00000430407 ZNF496Q96IT1 587 aaPredicted RBP23.35■■□□□ 1.33
RCC1-209ENST00000430407 ARFGEF1Q9Y6D6 1849 aa23.35■■□□□ 1.33
RCC1-209ENST00000430407 MAPK8IP3Q9UPT6 1336 aa23.34■■□□□ 1.33
RCC1-209ENST00000430407 EIF5P55010 431 aaKnown RBP23.34■■□□□ 1.33
RCC1-209ENST00000430407 MCM10Q7L590 875 aa23.34■■□□□ 1.33
RCC1-209ENST00000430407 FMNL2Q96PY5 1086 aa23.34■■□□□ 1.33
RCC1-209ENST00000430407 HEG1Q9ULI3 1381 aa23.33■■□□□ 1.33
RCC1-209ENST00000430407 RRAGCQ9HB90 399 aa23.33■■□□□ 1.33
RCC1-209ENST00000430407 NPHP1O15259 732 aa23.32■■□□□ 1.32
RCC1-209ENST00000430407 FSTL1Q12841 308 aa23.32■■□□□ 1.32
RCC1-209ENST00000430407 DCTN1Q14203 1278 aa23.32■■□□□ 1.32
RCC1-209ENST00000430407 NFE2L2Q16236 605 aa23.32■■□□□ 1.32
RCC1-209ENST00000430407 LMNB1P20700 586 aa23.31■■□□□ 1.32
RCC1-209ENST00000430407 RASSF7Q02833 373 aa23.31■■□□□ 1.32
RCC1-209ENST00000430407 ZC3H4Q9UPT8 1303 aaKnown RBP23.31■■□□□ 1.32
RCC1-209ENST00000430407 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
RCC1-209ENST00000430407 PDE6BP35913 854 aa23.3■■□□□ 1.32
RCC1-209ENST00000430407 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
RCC1-209ENST00000430407 PDZRN3Q9UPQ7 1066 aa23.3■■□□□ 1.32
RCC1-209ENST00000430407 TBC1D2BQ9UPU7 963 aa23.3■■□□□ 1.32
RCC1-209ENST00000430407 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
RCC1-209ENST00000430407 TBC1D9BQ66K14 1250 aa23.29■■□□□ 1.32
RCC1-209ENST00000430407 ZNF622Q969S3 477 aaKnown RBP eCLIP23.29■■□□□ 1.32
RCC1-209ENST00000430407 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
RCC1-209ENST00000430407 KCNQ3O43525 872 aa23.28■■□□□ 1.32
RCC1-209ENST00000430407 WDR43Q15061 677 aaKnown RBP eCLIP23.28■■□□□ 1.32
RCC1-209ENST00000430407 TAF7Q15545 349 aaPredicted RBP23.28■■□□□ 1.32
RCC1-209ENST00000430407 SETDB2Q96T68 719 aa23.27■■□□□ 1.32
RCC1-209ENST00000430407 BRIP1Q9BX63 1249 aa23.27■■□□□ 1.32
RCC1-209ENST00000430407 CARMIL3Q8ND23 1372 aa23.27■■□□□ 1.31
RCC1-209ENST00000430407 A1BGP04217 495 aa23.26■■□□□ 1.31
RCC1-209ENST00000430407 SMC1BQ8NDV3 1235 aa23.26■■□□□ 1.31
RCC1-209ENST00000430407 PNISRQ8TF01 805 aaKnown RBP23.25■■□□□ 1.31
RCC1-209ENST00000430407 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
RCC1-209ENST00000430407 GLTPD2A6NH11 291 aa23.24■■□□□ 1.31
RCC1-209ENST00000430407 ST5P78524 1137 aa23.24■■□□□ 1.31
RCC1-209ENST00000430407 PRR5LQ6MZQ0 368 aa23.24■■□□□ 1.31
RCC1-209ENST00000430407 DNAJC5GQ8N7S2 189 aa23.24■■□□□ 1.31
RCC1-209ENST00000430407 CNBD1Q8NA66 436 aa23.24■■□□□ 1.31
RCC1-209ENST00000430407 VEGFAP15692 232 aaPredicted RBP23.23■■□□□ 1.31
RCC1-209ENST00000430407 DPY19L2Q6NUT2 758 aa23.23■■□□□ 1.31
RCC1-209ENST00000430407 DZIP3Q86Y13 1208 aaKnown RBP23.23■■□□□ 1.31
RCC1-209ENST00000430407 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
RCC1-209ENST00000430407 AFDNP55196 1824 aaKnown RBP23.23■■□□□ 1.31
RCC1-209ENST00000430407 SNRPA1P09661 255 aaKnown RBP23.22■■□□□ 1.31
RCC1-209ENST00000430407 RIPK4P57078 832 aa23.22■■□□□ 1.31
RCC1-209ENST00000430407 CCDC24Q8N4L8 307 aa23.22■■□□□ 1.31
RCC1-209ENST00000430407 C21orf2O43822 256 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms