RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 KCNA3P22001 575 aa20.04■□□□□ 0.8
MSH5-208ENST00000429846 TM4SF1P30408 202 aa20.04■□□□□ 0.8
MSH5-208ENST00000429846 USPL1Q5W0Q7 1092 aa20.04■□□□□ 0.8
MSH5-208ENST00000429846 NARFQ9UHQ1 456 aa20.04■□□□□ 0.8
MSH5-208ENST00000429846 ZBTB1Q9Y2K1 713 aa20.03■□□□□ 0.8
MSH5-208ENST00000429846 GNAT3A8MTJ3 354 aa20.02■□□□□ 0.8
MSH5-208ENST00000429846 TEFQ10587 303 aa20.02■□□□□ 0.8
MSH5-208ENST00000429846 ARHGAP27Q6ZUM4 889 aa20.02■□□□□ 0.8
MSH5-208ENST00000429846 CFAP53Q96M91 514 aa20.02■□□□□ 0.8
MSH5-208ENST00000429846 DLEC1Q9Y238 1755 aa20.02■□□□□ 0.8
MSH5-208ENST00000429846 STARD3NLO95772 234 aa20.01■□□□□ 0.79
MSH5-208ENST00000429846 DALRD3Q5D0E6 543 aaKnown RBP20.01■□□□□ 0.79
MSH5-208ENST00000429846 SCN7AQ01118 1682 aa20■□□□□ 0.79
MSH5-208ENST00000429846 KIF3CO14782 793 aa20■□□□□ 0.79
MSH5-208ENST00000429846 CEMIPQ8WUJ3 1361 aa19.99■□□□□ 0.79
MSH5-208ENST00000429846 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
MSH5-208ENST00000429846 HSPA6P17066 643 aa19.99■□□□□ 0.79
MSH5-208ENST00000429846 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
MSH5-208ENST00000429846 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
MSH5-208ENST00000429846 TEX13AQ9BXU3 409 aaPredicted RBP19.99■□□□□ 0.79
MSH5-208ENST00000429846 A0A087WZG4 1122 aa19.98■□□□□ 0.79
MSH5-208ENST00000429846 NFIXQ14938 502 aa19.98■□□□□ 0.79
MSH5-208ENST00000429846 IL17REQ8NFR9 667 aa19.98■□□□□ 0.79
MSH5-208ENST00000429846 ZNF496Q96IT1 587 aaPredicted RBP19.97■□□□□ 0.79
MSH5-208ENST00000429846 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
MSH5-208ENST00000429846 SBF1O95248 1867 aa19.96■□□□□ 0.79
MSH5-208ENST00000429846 CANXP27824 592 aaKnown RBP19.96■□□□□ 0.79
MSH5-208ENST00000429846 CHRNA5P30532 468 aa19.96■□□□□ 0.79
MSH5-208ENST00000429846 EIF5P55010 431 aaKnown RBP19.96■□□□□ 0.79
MSH5-208ENST00000429846 BCL2L12Q9HB09 334 aa19.96■□□□□ 0.79
MSH5-208ENST00000429846 PRKAR2BP31323 418 aa19.95■□□□□ 0.78
MSH5-208ENST00000429846 C9orf131Q5VYM1 1079 aa19.95■□□□□ 0.78
MSH5-208ENST00000429846 FMNL2Q96PY5 1086 aa19.95■□□□□ 0.78
MSH5-208ENST00000429846 RSPH6AQ9H0K4 717 aa19.95■□□□□ 0.78
MSH5-208ENST00000429846 SERPINB2P05120 415 aa19.94■□□□□ 0.78
MSH5-208ENST00000429846 TOMM70O94826 608 aa19.93■□□□□ 0.78
MSH5-208ENST00000429846 TNRC6CQ9HCJ0 1690 aaKnown RBP19.93■□□□□ 0.78
MSH5-208ENST00000429846 BCORQ6W2J9 1755 aa19.93■□□□□ 0.78
MSH5-208ENST00000429846 IL6STP40189 918 aaPredicted RBP19.92■□□□□ 0.78
MSH5-208ENST00000429846 PHACTR3Q96KR7 559 aa19.92■□□□□ 0.78
MSH5-208ENST00000429846 CEP350Q5VT06 3117 aa19.92■□□□□ 0.78
MSH5-208ENST00000429846 BTBD11A6QL63 1104 aa19.91■□□□□ 0.78
MSH5-208ENST00000429846 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
MSH5-208ENST00000429846 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
MSH5-208ENST00000429846 RNF181Q9P0P0 153 aa19.91■□□□□ 0.78
MSH5-208ENST00000429846 ZC3H4Q9UPT8 1303 aaKnown RBP19.91■□□□□ 0.78
MSH5-208ENST00000429846 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
MSH5-208ENST00000429846 U2AF1L5P0DN76 240 aaPredicted RBP19.9■□□□□ 0.78
MSH5-208ENST00000429846 U2AF1Q01081 240 aaKnown RBP eCLIP19.9■□□□□ 0.78
MSH5-208ENST00000429846 PDZRN3Q9UPQ7 1066 aa19.9■□□□□ 0.78
MSH5-208ENST00000429846 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
MSH5-208ENST00000429846 CARMIL3Q8ND23 1372 aa19.9■□□□□ 0.78
MSH5-208ENST00000429846 TTLL6Q8N841 843 aa19.89■□□□□ 0.77
MSH5-208ENST00000429846 RTF1Q92541 710 aaKnown RBP19.89■□□□□ 0.77
MSH5-208ENST00000429846 NMRK2Q9NPI5 230 aa19.89■□□□□ 0.77
MSH5-208ENST00000429846 BICDL1Q6ZP65 573 aa19.88■□□□□ 0.77
MSH5-208ENST00000429846 ZNF330Q9Y3S2 320 aaPredicted RBP19.88■□□□□ 0.77
MSH5-208ENST00000429846 H0YIN7 160 aa19.87■□□□□ 0.77
MSH5-208ENST00000429846 APLP1P51693 650 aa19.87■□□□□ 0.77
MSH5-208ENST00000429846 TBC1D9BQ66K14 1250 aa19.87■□□□□ 0.77
MSH5-208ENST00000429846 C2CD5Q86YS7 1000 aa19.87■□□□□ 0.77
MSH5-208ENST00000429846 COL11A2P13942 1736 aaPredicted RBP19.87■□□□□ 0.77
MSH5-208ENST00000429846 TIAM2Q8IVF5 1701 aa19.87■□□□□ 0.77
MSH5-208ENST00000429846 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
MSH5-208ENST00000429846 C16orf71Q8IYS4 520 aaPredicted RBP19.86■□□□□ 0.77
MSH5-208ENST00000429846 RBM46Q8TBY0 533 aaKnown RBP19.86■□□□□ 0.77
MSH5-208ENST00000429846 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
MSH5-208ENST00000429846 PDE6BP35913 854 aa19.85■□□□□ 0.77
MSH5-208ENST00000429846 BRIP1Q9BX63 1249 aa19.85■□□□□ 0.77
MSH5-208ENST00000429846 CCDC88AQ3V6T2 1871 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 KCNQ3O43525 872 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 CAMTA2O94983 1202 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 A1BGP04217 495 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 LMNB1P20700 586 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 RASSF7Q02833 373 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 PRR5LQ6MZQ0 368 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 LAMB4A4D0S4 1761 aa19.84■□□□□ 0.77
MSH5-208ENST00000429846 ARFGEF2Q9Y6D5 1785 aa19.83■□□□□ 0.77
MSH5-208ENST00000429846 WDR90Q96KV7 1748 aa19.83■□□□□ 0.77
MSH5-208ENST00000429846 SNRPA1P09661 255 aaKnown RBP19.83■□□□□ 0.77
MSH5-208ENST00000429846 MCM10Q7L590 875 aa19.83■□□□□ 0.77
MSH5-208ENST00000429846 DZIP3Q86Y13 1208 aaKnown RBP19.83■□□□□ 0.77
MSH5-208ENST00000429846 SETDB2Q96T68 719 aa19.83■□□□□ 0.77
MSH5-208ENST00000429846 DLG5Q8TDM6 1919 aa19.82■□□□□ 0.76
MSH5-208ENST00000429846 FER1L6Q2WGJ9 1857 aa19.82■□□□□ 0.76
MSH5-208ENST00000429846 CNBD1Q8NA66 436 aa19.82■□□□□ 0.76
MSH5-208ENST00000429846 USP16Q9Y5T5 823 aa19.82■□□□□ 0.76
MSH5-208ENST00000429846 DICER1Q9UPY3 1922 aaKnown RBP19.81■□□□□ 0.76
MSH5-208ENST00000429846 RGL2O15211 777 aa19.81■□□□□ 0.76
MSH5-208ENST00000429846 NEFMP07197 916 aa19.81■□□□□ 0.76
MSH5-208ENST00000429846 FSTL1Q12841 308 aa19.81■□□□□ 0.76
MSH5-208ENST00000429846 CLEC4GQ6UXB4 293 aa19.81■□□□□ 0.76
MSH5-208ENST00000429846 NPHP1O15259 732 aa19.8■□□□□ 0.76
MSH5-208ENST00000429846 ST5P78524 1137 aa19.8■□□□□ 0.76
MSH5-208ENST00000429846 ZNF622Q969S3 477 aaKnown RBP eCLIP19.8■□□□□ 0.762e-11■□□□□ 9
MSH5-208ENST00000429846 ZNF652Q9Y2D9 606 aa19.8■□□□□ 0.76
MSH5-208ENST00000429846 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
MSH5-208ENST00000429846 CACNA1SQ13698 1873 aa19.79■□□□□ 0.76
MSH5-208ENST00000429846 GLTPD2A6NH11 291 aa19.78■□□□□ 0.76
MSH5-208ENST00000429846 NFKBIEO00221 500 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms