RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 ZBTB40Q9NUA8 1239 aa21.28■■□□□ 1
ABCF3-203ENST00000429586 NWD2Q9ULI1 1742 aa21.28■■□□□ 1
ABCF3-203ENST00000429586 SOS1Q07889 1333 aaPredicted RBP21.28■■□□□ 1
ABCF3-203ENST00000429586 SPATA31A1Q5TZJ5 1347 aa21.28■■□□□ 1
ABCF3-203ENST00000429586 L1TD1Q5T7N2 865 aaKnown RBP21.28■■□□□ 1
ABCF3-203ENST00000429586 NGLY1Q96IV0 654 aa21.28■■□□□ 1
ABCF3-203ENST00000429586 SLIT2O94813 1529 aa21.28■■□□□ 1
ABCF3-203ENST00000429586 HEG1Q9ULI3 1381 aa21.28■■□□□ 1
ABCF3-203ENST00000429586 TTC5Q8N0Z6 440 aa21.27■■□□□ 1
ABCF3-203ENST00000429586 LRP6O75581 1613 aa21.27■■□□□ 1
ABCF3-203ENST00000429586 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
ABCF3-203ENST00000429586 HSP90AA1P07900 732 aaKnown RBP21.26■□□□□ 0.99
ABCF3-203ENST00000429586 NKX1-1Q15270 411 aaPredicted RBP21.26■□□□□ 0.99
ABCF3-203ENST00000429586 HOXB7P09629 217 aa21.26■□□□□ 0.99
ABCF3-203ENST00000429586 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
ABCF3-203ENST00000429586 PROSER3Q2NL68 480 aa21.25■□□□□ 0.99
ABCF3-203ENST00000429586 AAMPQ13685 434 aa21.25■□□□□ 0.99
ABCF3-203ENST00000429586 EXOC5O00471 708 aa21.24■□□□□ 0.99
ABCF3-203ENST00000429586 NAP1L5Q96NT1 182 aaPredicted RBP21.24■□□□□ 0.99
ABCF3-203ENST00000429586 SPATA31A5Q5VU36 1347 aa21.24■□□□□ 0.99
ABCF3-203ENST00000429586 SPATA31A7Q8IWB4 1347 aa21.24■□□□□ 0.99
ABCF3-203ENST00000429586 ERVV-2B6SEH9 535 aa21.24■□□□□ 0.99
ABCF3-203ENST00000429586 INTS3Q68E01 1043 aaKnown RBP21.24■□□□□ 0.99
ABCF3-203ENST00000429586 ITGB4P16144 1822 aa21.23■□□□□ 0.99
ABCF3-203ENST00000429586 FAM161AQ3B820 660 aa21.23■□□□□ 0.99
ABCF3-203ENST00000429586 PIP4K2AP48426 406 aaPredicted RBP21.22■□□□□ 0.99
ABCF3-203ENST00000429586 UNC5CLQ8IV45 518 aa21.22■□□□□ 0.99
ABCF3-203ENST00000429586 FMNL2Q96PY5 1086 aa21.21■□□□□ 0.99
ABCF3-203ENST00000429586 BCL9LQ86UU0 1499 aa21.21■□□□□ 0.99
ABCF3-203ENST00000429586 PTCD1O75127 700 aaKnown RBP21.21■□□□□ 0.99
ABCF3-203ENST00000429586 CLCN1P35523 988 aa21.21■□□□□ 0.99
ABCF3-203ENST00000429586 DBF4Q9UBU7 674 aaPredicted RBP21.21■□□□□ 0.99
ABCF3-203ENST00000429586 USP16Q9Y5T5 823 aa21.21■□□□□ 0.99
ABCF3-203ENST00000429586 TMOD3Q9NYL9 352 aa21.2■□□□□ 0.98
ABCF3-203ENST00000429586 GLI3P10071 1580 aa21.2■□□□□ 0.98
ABCF3-203ENST00000429586 TNS2Q63HR2 1409 aa21.2■□□□□ 0.98
ABCF3-203ENST00000429586 C8orf34Q49A92 452 aa21.2■□□□□ 0.98
ABCF3-203ENST00000429586 DDB1Q16531 1140 aa21.19■□□□□ 0.98
ABCF3-203ENST00000429586 MEIS3Q99687 375 aa21.19■□□□□ 0.98
ABCF3-203ENST00000429586 RWDD1Q9H446 243 aaPredicted RBP21.19■□□□□ 0.98
ABCF3-203ENST00000429586 SPATA31A6Q5VVP1 1343 aa21.19■□□□□ 0.98
ABCF3-203ENST00000429586 UBR2Q8IWV8 1755 aa21.19■□□□□ 0.98
ABCF3-203ENST00000429586 MYL6BP14649 208 aa21.19■□□□□ 0.98
ABCF3-203ENST00000429586 FAM98CQ17RN3 349 aaKnown RBP21.19■□□□□ 0.98
ABCF3-203ENST00000429586 SYTL4Q96C24 671 aaPredicted RBP21.19■□□□□ 0.98
ABCF3-203ENST00000429586 PAPPAQ13219 1627 aa21.19■□□□□ 0.98
ABCF3-203ENST00000429586 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
ABCF3-203ENST00000429586 THRAP3Q9Y2W1 955 aaKnown RBP21.18■□□□□ 0.98
ABCF3-203ENST00000429586 A0A0G2JS52 829 aa21.18■□□□□ 0.98
ABCF3-203ENST00000429586 PIGBQ92521 554 aa21.18■□□□□ 0.98
ABCF3-203ENST00000429586 RGS3P49796 1198 aa21.17■□□□□ 0.98
ABCF3-203ENST00000429586 MEX3CQ5U5Q3 659 aaKnown RBP21.17■□□□□ 0.98
ABCF3-203ENST00000429586 PI4KAP2A4QPH2 592 aa21.17■□□□□ 0.98
ABCF3-203ENST00000429586 AIMP1Q12904 312 aaKnown RBP21.17■□□□□ 0.98
ABCF3-203ENST00000429586 PDIA6Q15084 440 aa21.17■□□□□ 0.98
ABCF3-203ENST00000429586 PI4KAP1Q8N8J0 262 aa21.17■□□□□ 0.98
ABCF3-203ENST00000429586 ASAP1Q9ULH1 1129 aa21.17■□□□□ 0.98
ABCF3-203ENST00000429586 DOT1LQ8TEK3 1739 aa21.17■□□□□ 0.98
ABCF3-203ENST00000429586 KCPQ6ZWJ8 1503 aa21.17■□□□□ 0.98
ABCF3-203ENST00000429586 USP21Q9UK80 565 aa21.16■□□□□ 0.98
ABCF3-203ENST00000429586 CCT4P50991 539 aaKnown RBP21.16■□□□□ 0.98
ABCF3-203ENST00000429586 PDE4CQ08493 712 aa21.15■□□□□ 0.98
ABCF3-203ENST00000429586 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
ABCF3-203ENST00000429586 CDCA7Q9BWT1 371 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-203ENST00000429586 DDX21Q9NR30 783 aaKnown RBP eCLIP21.15■□□□□ 0.98
ABCF3-203ENST00000429586 FNBP4Q8N3X1 1017 aaPredicted RBP21.14■□□□□ 0.98
ABCF3-203ENST00000429586 CHMP4BQ9H444 224 aaKnown RBP21.14■□□□□ 0.98
ABCF3-203ENST00000429586 LAMB4A4D0S4 1761 aa21.14■□□□□ 0.98
ABCF3-203ENST00000429586 ADCY9O60503 1353 aa21.14■□□□□ 0.97
ABCF3-203ENST00000429586 PDIA4P13667 645 aaKnown RBP21.14■□□□□ 0.97
ABCF3-203ENST00000429586 SIRT2Q8IXJ6 389 aa21.14■□□□□ 0.97
ABCF3-203ENST00000429586 MARCH10Q8NA82 808 aaPredicted RBP21.14■□□□□ 0.97
ABCF3-203ENST00000429586 N4BP2Q86UW6 1770 aaPredicted RBP21.14■□□□□ 0.97
ABCF3-203ENST00000429586 HDAC1Q13547 482 aaPredicted RBP21.13■□□□□ 0.97
ABCF3-203ENST00000429586 VPS72Q15906 364 aa21.13■□□□□ 0.97
ABCF3-203ENST00000429586 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
ABCF3-203ENST00000429586 ACSBG1Q96GR2 724 aa21.13■□□□□ 0.97
ABCF3-203ENST00000429586 HYPKQ9NX55 129 aa21.13■□□□□ 0.97
ABCF3-203ENST00000429586 PRIM1P49642 420 aaKnown RBP21.12■□□□□ 0.97
ABCF3-203ENST00000429586 DNAAF4Q8WXU2 420 aa21.12■□□□□ 0.97
ABCF3-203ENST00000429586 PDZRN3Q9UPQ7 1066 aa21.12■□□□□ 0.97
ABCF3-203ENST00000429586 ATG3Q9NT62 314 aa21.11■□□□□ 0.97
ABCF3-203ENST00000429586 MAP3K2Q9Y2U5 619 aa21.11■□□□□ 0.97
ABCF3-203ENST00000429586 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
ABCF3-203ENST00000429586 XAGE3Q8WTP9 111 aa21.1■□□□□ 0.97
ABCF3-203ENST00000429586 BCL9O00512 1426 aa21.1■□□□□ 0.97
ABCF3-203ENST00000429586 PXDNLA1KZ92 1463 aa21.1■□□□□ 0.97
ABCF3-203ENST00000429586 ATP10DQ9P241 1426 aa21.09■□□□□ 0.97
ABCF3-203ENST00000429586 AFF2P51816 1311 aa21.09■□□□□ 0.97
ABCF3-203ENST00000429586 COPS6Q7L5N1 327 aa21.09■□□□□ 0.97
ABCF3-203ENST00000429586 A1BGP04217 495 aa21.08■□□□□ 0.97
ABCF3-203ENST00000429586 SRCIN1Q9C0H9 1055 aa21.08■□□□□ 0.97
ABCF3-203ENST00000429586 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.08■□□□□ 0.97
ABCF3-203ENST00000429586 NBPF26B4DH59 902 aa21.08■□□□□ 0.96
ABCF3-203ENST00000429586 BEND3Q5T5X7 828 aa21.08■□□□□ 0.96
ABCF3-203ENST00000429586 NBPF14Q5TI25 921 aa21.08■□□□□ 0.96
ABCF3-203ENST00000429586 NBPF10Q6P3W6 841 aaKnown RBP21.08■□□□□ 0.96
ABCF3-203ENST00000429586 KSR2Q6VAB6 950 aa21.08■□□□□ 0.96
ABCF3-203ENST00000429586 LRP10Q7Z4F1 713 aa21.08■□□□□ 0.96
ABCF3-203ENST00000429586 NBPF15Q8N660 670 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms