RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GOLGA6L4A6NEF3 574 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 CHL1O00533 1208 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 CPA1P15085 419 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 EYA1Q99502 592 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 GNAT3A8MTJ3 354 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 PRR36Q9H6K5 1346 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
HPS4-205ENST00000429411 SECISBP2LQ93073 1101 aaKnown RBP9.73□□□□□ -0.85
HPS4-205ENST00000429411 SYAP1Q96A49 352 aaPredicted RBP9.73□□□□□ -0.85
HPS4-205ENST00000429411 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
HPS4-205ENST00000429411 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
HPS4-205ENST00000429411 ZNF853P0CG23 659 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 SRCIN1Q9C0H9 1055 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 RBSNQ9H1K0 784 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 SMC3Q9UQE7 1217 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 PTPRCP08575 1304 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 IFIT2P09913 472 aaKnown RBP9.72□□□□□ -0.85
HPS4-205ENST00000429411 MPRIPQ6WCQ1 1025 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 PPP1R42Q7Z4L9 355 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 BBXQ8WY36 941 aaPredicted RBP9.72□□□□□ -0.85
HPS4-205ENST00000429411 FERMT3Q86UX7 667 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 ZSCAN30Q86W11 494 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 NEURL4Q96JN8 1562 aa9.72□□□□□ -0.85
HPS4-205ENST00000429411 SHPRHQ149N8 1683 aa9.71□□□□□ -0.85
HPS4-205ENST00000429411 RTL1A6NKG5 1358 aa9.71□□□□□ -0.85
HPS4-205ENST00000429411 ESYT1Q9BSJ8 1104 aa9.71□□□□□ -0.85
HPS4-205ENST00000429411 QTRT2Q9H974 415 aaKnown RBP9.71□□□□□ -0.85
HPS4-205ENST00000429411 USP21Q9UK80 565 aa9.71□□□□□ -0.85
HPS4-205ENST00000429411 NRXN1Q9ULB1 1477 aa9.71□□□□□ -0.85
HPS4-205ENST00000429411 AK9Q5TCS8 1911 aa9.71□□□□□ -0.85
HPS4-205ENST00000429411 EDC4Q6P2E9 1401 aaKnown RBP9.71□□□□□ -0.85
HPS4-205ENST00000429411 KIAA1210Q9ULL0 1709 aa9.71□□□□□ -0.86
HPS4-205ENST00000429411 DRC7Q8IY82 874 aa9.71□□□□□ -0.86
HPS4-205ENST00000429411 TCEANC2Q96MN5 208 aa9.71□□□□□ -0.86
HPS4-205ENST00000429411 ZNF830Q96NB3 372 aaPredicted RBP9.71□□□□□ -0.86
HPS4-205ENST00000429411 ISY1Q9ULR0 285 aaKnown RBP9.71□□□□□ -0.86
HPS4-205ENST00000429411 SETBP1Q9Y6X0 1596 aa9.71□□□□□ -0.86
HPS4-205ENST00000429411 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 STK3Q13188 491 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 ILDR2Q71H61 639 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 CERS3Q8IU89 383 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 UNC5CLQ8IV45 518 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 PI4KAP1Q8N8J0 262 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 JARID2Q92833 1246 aaPredicted RBP9.7□□□□□ -0.86
HPS4-205ENST00000429411 BTG4Q9NY30 223 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 KIAA2012Q0VF49 1180 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 NLRP2Q9NX02 1062 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 NSFL1CQ9UNZ2 370 aaKnown RBP9.7□□□□□ -0.86
HPS4-205ENST00000429411 CASTP20810 708 aaKnown RBP9.7□□□□□ -0.86
HPS4-205ENST00000429411 C1orf141Q5JVX7 400 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 CCDC83Q8IWF9 413 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 ARHGAP23Q9P227 1491 aa9.7□□□□□ -0.86
HPS4-205ENST00000429411 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
HPS4-205ENST00000429411 CLASRPQ8N2M8 674 aaKnown RBP9.69□□□□□ -0.86
HPS4-205ENST00000429411 STRCQ7RTU9 1775 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 AFF2P51816 1311 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 PPFIA3O75145 1194 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 MYL6BP14649 208 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 CNTROBQ8N137 903 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 JAKMIP1Q96N16 626 aaKnown RBP9.69□□□□□ -0.86
HPS4-205ENST00000429411 TSPY26PQ9H489 355 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 TMEM63CQ9P1W3 806 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 KAT6BQ8WYB5 2073 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 NEXMIFQ5QGS0 1516 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 SPC24Q8NBT2 197 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 SYTL4Q96C24 671 aaPredicted RBP9.69□□□□□ -0.86
HPS4-205ENST00000429411 CHPF2Q9P2E5 772 aa9.69□□□□□ -0.86
HPS4-205ENST00000429411 PA2G4Q9UQ80 394 aaKnown RBP9.69□□□□□ -0.86
HPS4-205ENST00000429411 PATL2C9JE40 543 aaKnown RBP9.68□□□□□ -0.86
HPS4-205ENST00000429411 MBD3O95983 291 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 CHMLP26374 656 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
HPS4-205ENST00000429411 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
HPS4-205ENST00000429411 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 CCDC8Q9H0W5 538 aaPredicted RBP9.68□□□□□ -0.86
HPS4-205ENST00000429411 USP25Q9UHP3 1055 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 MYO5BQ9ULV0 1848 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 PIP4K2AP48426 406 aaPredicted RBP9.68□□□□□ -0.86
HPS4-205ENST00000429411 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 UBR1Q8IWV7 1749 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 TMEM131LA2VDJ0 1609 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 ADGRL3Q9HAR2 1447 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.68□□□□□ -0.86
HPS4-205ENST00000429411 AACSQ86V21 672 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 GPATCH3Q96I76 525 aa9.68□□□□□ -0.86
HPS4-205ENST00000429411 SLIT1O75093 1534 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 BTBD11A6QL63 1104 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 GADD45BO75293 160 aaPredicted RBP9.67□□□□□ -0.86
HPS4-205ENST00000429411 CLSTN1O94985 981 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 NBPF7P0C2Y1 421 aaPredicted RBP9.67□□□□□ -0.86
HPS4-205ENST00000429411 CEBPZQ03701 1054 aaKnown RBP9.67□□□□□ -0.86
HPS4-205ENST00000429411 NECAB1Q8N987 351 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 RHPN1Q8TCX5 695 aa9.67□□□□□ -0.86
HPS4-205ENST00000429411 CNPY2Q9Y2B0 182 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms