RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 VSIG10Q8N0Z9 540 aa17.71■□□□□ 0.43
HLA-F-219ENST00000429294 RBM46Q8TBY0 533 aaKnown RBP17.71■□□□□ 0.43
HLA-F-219ENST00000429294 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.42
HLA-F-219ENST00000429294 COL15A1P39059 1388 aa17.7■□□□□ 0.42
HLA-F-219ENST00000429294 STARD3NLO95772 234 aa17.7■□□□□ 0.42
HLA-F-219ENST00000429294 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
HLA-F-219ENST00000429294 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
HLA-F-219ENST00000429294 NFIXQ14938 502 aa17.69■□□□□ 0.42
HLA-F-219ENST00000429294 ZBTB1Q9Y2K1 713 aa17.69■□□□□ 0.42
HLA-F-219ENST00000429294 MRC1P22897 1456 aa17.69■□□□□ 0.42
HLA-F-219ENST00000429294 A0A087WZG4 1122 aa17.68■□□□□ 0.42
HLA-F-219ENST00000429294 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
HLA-F-219ENST00000429294 SERPINB2P05120 415 aa17.67■□□□□ 0.42
HLA-F-219ENST00000429294 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
HLA-F-219ENST00000429294 TEFQ10587 303 aa17.67■□□□□ 0.42
HLA-F-219ENST00000429294 FSTL1Q12841 308 aa17.67■□□□□ 0.42
HLA-F-219ENST00000429294 H0YIN7 160 aa17.66■□□□□ 0.42
HLA-F-219ENST00000429294 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
HLA-F-219ENST00000429294 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
HLA-F-219ENST00000429294 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
HLA-F-219ENST00000429294 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
HLA-F-219ENST00000429294 ZC3H4Q9UPT8 1303 aaKnown RBP17.66■□□□□ 0.42
HLA-F-219ENST00000429294 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
HLA-F-219ENST00000429294 RRAGCQ9HB90 399 aa17.65■□□□□ 0.42
HLA-F-219ENST00000429294 KCPQ6ZWJ8 1503 aa17.65■□□□□ 0.42
HLA-F-219ENST00000429294 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
HLA-F-219ENST00000429294 LMNB1P20700 586 aa17.64■□□□□ 0.41
HLA-F-219ENST00000429294 C2CD5Q86YS7 1000 aa17.64■□□□□ 0.41
HLA-F-219ENST00000429294 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
HLA-F-219ENST00000429294 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
HLA-F-219ENST00000429294 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
HLA-F-219ENST00000429294 DNAJC5GQ8N7S2 189 aa17.63■□□□□ 0.41
HLA-F-219ENST00000429294 PDZRN3Q9UPQ7 1066 aa17.63■□□□□ 0.41
HLA-F-219ENST00000429294 ZNF330Q9Y3S2 320 aaPredicted RBP17.63■□□□□ 0.41
HLA-F-219ENST00000429294 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
HLA-F-219ENST00000429294 EIF5P55010 431 aaKnown RBP17.62■□□□□ 0.41
HLA-F-219ENST00000429294 ZNF790Q6PG37 636 aa17.62■□□□□ 0.41
HLA-F-219ENST00000429294 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
HLA-F-219ENST00000429294 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
HLA-F-219ENST00000429294 SBF1O95248 1867 aa17.61■□□□□ 0.41
HLA-F-219ENST00000429294 RASSF7Q02833 373 aa17.61■□□□□ 0.41
HLA-F-219ENST00000429294 SMC1BQ8NDV3 1235 aa17.61■□□□□ 0.41
HLA-F-219ENST00000429294 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
HLA-F-219ENST00000429294 NPHP1O15259 732 aa17.6■□□□□ 0.41
HLA-F-219ENST00000429294 PDE6BP35913 854 aa17.6■□□□□ 0.41
HLA-F-219ENST00000429294 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
HLA-F-219ENST00000429294 FMNL2Q96PY5 1086 aa17.6■□□□□ 0.41
HLA-F-219ENST00000429294 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
HLA-F-219ENST00000429294 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
HLA-F-219ENST00000429294 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
HLA-F-219ENST00000429294 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
HLA-F-219ENST00000429294 IL6STP40189 918 aaPredicted RBP17.59■□□□□ 0.41
HLA-F-219ENST00000429294 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
HLA-F-219ENST00000429294 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.41
HLA-F-219ENST00000429294 KLRG1Q96E93 195 aa17.59■□□□□ 0.41
HLA-F-219ENST00000429294 TNRC6CQ9HCJ0 1690 aaKnown RBP17.58■□□□□ 0.41
HLA-F-219ENST00000429294 DPY19L2Q6NUT2 758 aa17.58■□□□□ 0.4
HLA-F-219ENST00000429294 BRIP1Q9BX63 1249 aa17.58■□□□□ 0.4
HLA-F-219ENST00000429294 TBC1D2BQ9UPU7 963 aa17.58■□□□□ 0.4
HLA-F-219ENST00000429294 WDR90Q96KV7 1748 aa17.58■□□□□ 0.4
HLA-F-219ENST00000429294 NRXN2Q9P2S2 1712 aa17.58■□□□□ 0.4
HLA-F-219ENST00000429294 CARMIL3Q8ND23 1372 aa17.57■□□□□ 0.4
HLA-F-219ENST00000429294 TBC1D9BQ66K14 1250 aa17.57■□□□□ 0.4
HLA-F-219ENST00000429294 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
HLA-F-219ENST00000429294 NUDCQ9Y266 331 aa17.57■□□□□ 0.4
HLA-F-219ENST00000429294 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
HLA-F-219ENST00000429294 BTBD11A6QL63 1104 aa17.56■□□□□ 0.4
HLA-F-219ENST00000429294 HTRA3P83110 453 aa17.55■□□□□ 0.4
HLA-F-219ENST00000429294 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
HLA-F-219ENST00000429294 DLEC1Q9Y238 1755 aa17.54■□□□□ 0.4
HLA-F-219ENST00000429294 ST5P78524 1137 aa17.54■□□□□ 0.4
HLA-F-219ENST00000429294 PRR5LQ6MZQ0 368 aa17.54■□□□□ 0.4
HLA-F-219ENST00000429294 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
HLA-F-219ENST00000429294 CNKSR1Q969H4 720 aa17.54■□□□□ 0.4
HLA-F-219ENST00000429294 COL3A1P02461 1466 aaPredicted RBP17.54■□□□□ 0.4
HLA-F-219ENST00000429294 NFKBIEO00221 500 aa17.53■□□□□ 0.4
HLA-F-219ENST00000429294 C21orf2O43822 256 aa17.53■□□□□ 0.4
HLA-F-219ENST00000429294 A1BGP04217 495 aa17.53■□□□□ 0.4
HLA-F-219ENST00000429294 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
HLA-F-219ENST00000429294 JMYQ8N9B5 988 aa17.53■□□□□ 0.4
HLA-F-219ENST00000429294 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
HLA-F-219ENST00000429294 ERFEQ4G0M1 354 aa17.52■□□□□ 0.4
HLA-F-219ENST00000429294 SOGA3Q5TF21 947 aa17.52■□□□□ 0.4
HLA-F-219ENST00000429294 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
HLA-F-219ENST00000429294 CEMIPQ8WUJ3 1361 aa17.52■□□□□ 0.39
HLA-F-219ENST00000429294 CAMTA2O94983 1202 aa17.51■□□□□ 0.39
HLA-F-219ENST00000429294 PRELPP51888 382 aa17.51■□□□□ 0.39
HLA-F-219ENST00000429294 CCDC88AQ3V6T2 1871 aa17.51■□□□□ 0.39
HLA-F-219ENST00000429294 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
HLA-F-219ENST00000429294 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
HLA-F-219ENST00000429294 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
HLA-F-219ENST00000429294 ZNF652Q9Y2D9 606 aa17.51■□□□□ 0.39
HLA-F-219ENST00000429294 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
HLA-F-219ENST00000429294 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
HLA-F-219ENST00000429294 STYK1Q6J9G0 422 aa17.5■□□□□ 0.39
HLA-F-219ENST00000429294 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
HLA-F-219ENST00000429294 SCN7AQ01118 1682 aa17.49■□□□□ 0.39
HLA-F-219ENST00000429294 SNRPA1P09661 255 aaKnown RBP17.49■□□□□ 0.39
HLA-F-219ENST00000429294 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
HLA-F-219ENST00000429294 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms