RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 WDR43Q15061 677 aaKnown RBP eCLIP15.22■□□□□ 0.03
RCC1-208ENST00000429051 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
RCC1-208ENST00000429051 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
RCC1-208ENST00000429051 PARP3Q9Y6F1 533 aa15.22■□□□□ 0.03
RCC1-208ENST00000429051 UTRNP46939 3433 aa15.21■□□□□ 0.03
RCC1-208ENST00000429051 CHD4Q14839 1912 aa15.21■□□□□ 0.03
RCC1-208ENST00000429051 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
RCC1-208ENST00000429051 TAF7Q15545 349 aaPredicted RBP15.21■□□□□ 0.03
RCC1-208ENST00000429051 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
RCC1-208ENST00000429051 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
RCC1-208ENST00000429051 ZBTB1Q9Y2K1 713 aa15.21■□□□□ 0.03
RCC1-208ENST00000429051 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
RCC1-208ENST00000429051 A0A087WZG4 1122 aa15.2■□□□□ 0.02
RCC1-208ENST00000429051 GRIN3BO60391 1043 aa15.19■□□□□ 0.02
RCC1-208ENST00000429051 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
RCC1-208ENST00000429051 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
RCC1-208ENST00000429051 NARFQ9UHQ1 456 aa15.19■□□□□ 0.02
RCC1-208ENST00000429051 KCNQ3O43525 872 aa15.18■□□□□ 0.02
RCC1-208ENST00000429051 SNRPA1P09661 255 aaKnown RBP15.18■□□□□ 0.02
RCC1-208ENST00000429051 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
RCC1-208ENST00000429051 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
RCC1-208ENST00000429051 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
RCC1-208ENST00000429051 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
RCC1-208ENST00000429051 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
RCC1-208ENST00000429051 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
RCC1-208ENST00000429051 EIF5P55010 431 aaKnown RBP15.17■□□□□ 0.02
RCC1-208ENST00000429051 FKBP8Q14318 412 aa15.17■□□□□ 0.02
RCC1-208ENST00000429051 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
RCC1-208ENST00000429051 SCN7AQ01118 1682 aa15.16■□□□□ 0.02
RCC1-208ENST00000429051 RIPK4P57078 832 aa15.16■□□□□ 0.02
RCC1-208ENST00000429051 TGFB2P61812 414 aa15.16■□□□□ 0.02
RCC1-208ENST00000429051 ZNF330Q9Y3S2 320 aaPredicted RBP15.16■□□□□ 0.02
RCC1-208ENST00000429051 RUNDC1Q96C34 613 aa15.15■□□□□ 0.02
RCC1-208ENST00000429051 N4BP2Q86UW6 1770 aaPredicted RBP15.14■□□□□ 0.01
RCC1-208ENST00000429051 YBX3P16989 372 aaKnown RBP eCLIP15.14■□□□□ 0.018e-7■□□□□ 9
RCC1-208ENST00000429051 TM4SF1P30408 202 aa15.14■□□□□ 0.01
RCC1-208ENST00000429051 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
RCC1-208ENST00000429051 KIAA1551Q9HCM1 1747 aa15.14■□□□□ 0.01
RCC1-208ENST00000429051 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
RCC1-208ENST00000429051 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
RCC1-208ENST00000429051 A1BGP04217 495 aa15.13■□□□□ 0.01
RCC1-208ENST00000429051 DDR1Q08345 913 aa15.13■□□□□ 0.01
RCC1-208ENST00000429051 CCDC146Q8IYE0 955 aa15.13■□□□□ 0.01
RCC1-208ENST00000429051 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
RCC1-208ENST00000429051 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
RCC1-208ENST00000429051 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
RCC1-208ENST00000429051 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
RCC1-208ENST00000429051 BCORQ6W2J9 1755 aa15.12■□□□□ 0.01
RCC1-208ENST00000429051 BABAM1Q9NWV8 329 aa15.12■□□□□ 0.01
RCC1-208ENST00000429051 AFDNP55196 1824 aaKnown RBP15.12■□□□□ 0.01
RCC1-208ENST00000429051 NRXN2Q9P2S2 1712 aa15.12■□□□□ 0.01
RCC1-208ENST00000429051 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
RCC1-208ENST00000429051 NFIXQ14938 502 aa15.11■□□□□ 0.01
RCC1-208ENST00000429051 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
RCC1-208ENST00000429051 TSPYL4Q9UJ04 414 aa15.11■□□□□ 0.01
RCC1-208ENST00000429051 TBC1D2BQ9UPU7 963 aa15.11■□□□□ 0.01
RCC1-208ENST00000429051 A0A0G2JLW4 131 aa15.1■□□□□ 0.01
RCC1-208ENST00000429051 EIF4A1P60842 406 aaKnown RBP15.1■□□□□ 0.01
RCC1-208ENST00000429051 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
RCC1-208ENST00000429051 BCL2L12Q9HB09 334 aa15.1■□□□□ 0.01
RCC1-208ENST00000429051 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
RCC1-208ENST00000429051 ANP32CO43423 234 aa15.09■□□□□ 0.01
RCC1-208ENST00000429051 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
RCC1-208ENST00000429051 SERPINB2P05120 415 aa15.09■□□□□ 0.01
RCC1-208ENST00000429051 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
RCC1-208ENST00000429051 ZNF652Q9Y2D9 606 aa15.09■□□□□ 0.01
RCC1-208ENST00000429051 RRP7AQ9Y3A4 280 aaKnown RBP15.09■□□□□ 0.01
RCC1-208ENST00000429051 CARMIL3Q8ND23 1372 aa15.09■□□□□ 0.01
RCC1-208ENST00000429051 CAMTA2O94983 1202 aa15.08■□□□□ 0
RCC1-208ENST00000429051 DPEP1P16444 411 aa15.08■□□□□ 0
RCC1-208ENST00000429051 BICDL1Q6ZP65 573 aa15.08■□□□□ 0
RCC1-208ENST00000429051 BCS1LQ9Y276 419 aa15.08■□□□□ 0
RCC1-208ENST00000429051 RGL2O15211 777 aa15.07■□□□□ 0
RCC1-208ENST00000429051 PIP4K2AP48426 406 aaPredicted RBP15.07■□□□□ 0
RCC1-208ENST00000429051 TBC1D9BQ66K14 1250 aa15.07■□□□□ 0
RCC1-208ENST00000429051 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
RCC1-208ENST00000429051 SETDB2Q96T68 719 aa15.07■□□□□ 0
RCC1-208ENST00000429051 PIM2Q9P1W9 311 aa15.07■□□□□ 0
RCC1-208ENST00000429051 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
RCC1-208ENST00000429051 NBPF26B4DH59 902 aa15.06■□□□□ 0
RCC1-208ENST00000429051 NPHP1O15259 732 aa15.06■□□□□ 0
RCC1-208ENST00000429051 NBPF10Q6P3W6 841 aaKnown RBP15.06■□□□□ 0
RCC1-208ENST00000429051 NBPF15Q8N660 670 aa15.06■□□□□ 0
RCC1-208ENST00000429051 ERBB4Q15303 1308 aa15.06■□□□□ 0
RCC1-208ENST00000429051 ZNF784Q8NCA9 323 aaPredicted RBP15.05■□□□□ -0
RCC1-208ENST00000429051 TRIM35Q9UPQ4 493 aa15.05■□□□□ -0
RCC1-208ENST00000429051 PDZRN3Q9UPQ7 1066 aa15.05■□□□□ -0
RCC1-208ENST00000429051 DLEC1Q9Y238 1755 aa15.05■□□□□ -0
RCC1-208ENST00000429051 KCNA3P22001 575 aa15.04■□□□□ -0
RCC1-208ENST00000429051 CALD1Q05682 793 aaKnown RBP15.04■□□□□ -0
RCC1-208ENST00000429051 DALRD3Q5D0E6 543 aaKnown RBP15.04■□□□□ -0
RCC1-208ENST00000429051 LAS1LQ9Y4W2 734 aaKnown RBP15.04■□□□□ -0
RCC1-208ENST00000429051 H0YIN7 160 aa15.03■□□□□ -0
RCC1-208ENST00000429051 CHRNA5P30532 468 aa15.03■□□□□ -0
RCC1-208ENST00000429051 ST5P78524 1137 aa15.03■□□□□ -0
RCC1-208ENST00000429051 KIF6Q6ZMV9 814 aa15.03■□□□□ -0
RCC1-208ENST00000429051 CNBD1Q8NA66 436 aa15.03■□□□□ -0
RCC1-208ENST00000429051 CHL1O00533 1208 aa15.02■□□□□ -0
RCC1-208ENST00000429051 APAF1O14727 1248 aa15.02■□□□□ -0
RCC1-208ENST00000429051 MYL6BP14649 208 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms