RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 TNNQ9UQP3 1299 aa19.72■□□□□ 0.75
TVP23C-203ENST00000428082 RXRBP28702 533 aa19.72■□□□□ 0.75
TVP23C-203ENST00000428082 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
TVP23C-203ENST00000428082 ACSBG1Q96GR2 724 aa19.72■□□□□ 0.75
TVP23C-203ENST00000428082 TMOD3Q9NYL9 352 aa19.72■□□□□ 0.75
TVP23C-203ENST00000428082 PRIM1P49642 420 aaKnown RBP19.71■□□□□ 0.75
TVP23C-203ENST00000428082 EIF4A1P60842 406 aaKnown RBP19.71■□□□□ 0.75
TVP23C-203ENST00000428082 ZNF790Q6PG37 636 aa19.71■□□□□ 0.75
TVP23C-203ENST00000428082 VAMP4O75379 141 aa19.7■□□□□ 0.74
TVP23C-203ENST00000428082 PIGBQ92521 554 aa19.7■□□□□ 0.74
TVP23C-203ENST00000428082 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
TVP23C-203ENST00000428082 PAPPAQ13219 1627 aa19.7■□□□□ 0.74
TVP23C-203ENST00000428082 BCL9O00512 1426 aa19.7■□□□□ 0.74
TVP23C-203ENST00000428082 ITPRIPQ8IWB1 547 aa19.7■□□□□ 0.74
TVP23C-203ENST00000428082 NOB1Q9ULX3 412 aaKnown RBP19.7■□□□□ 0.74
TVP23C-203ENST00000428082 UBR2Q8IWV8 1755 aa19.67■□□□□ 0.74
TVP23C-203ENST00000428082 TTC5Q8N0Z6 440 aa19.67■□□□□ 0.74
TVP23C-203ENST00000428082 HEG1Q9ULI3 1381 aa19.67■□□□□ 0.74
TVP23C-203ENST00000428082 KCNQ2O43526 872 aa19.66■□□□□ 0.74
TVP23C-203ENST00000428082 KRT27Q7Z3Y8 459 aa19.66■□□□□ 0.74
TVP23C-203ENST00000428082 ARHGAP45Q92619 1136 aa19.66■□□□□ 0.74
TVP23C-203ENST00000428082 ZNF496Q96IT1 587 aaPredicted RBP19.66■□□□□ 0.74
TVP23C-203ENST00000428082 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
TVP23C-203ENST00000428082 ASAP1Q9ULH1 1129 aa19.66■□□□□ 0.74
TVP23C-203ENST00000428082 RGS12O14924 1447 aa19.66■□□□□ 0.74
TVP23C-203ENST00000428082 SBF2Q86WG5 1849 aa19.66■□□□□ 0.74
TVP23C-203ENST00000428082 KCPQ6ZWJ8 1503 aa19.65■□□□□ 0.74
TVP23C-203ENST00000428082 SLC4A3P48751 1232 aa19.64■□□□□ 0.74
TVP23C-203ENST00000428082 ATG3Q9NT62 314 aa19.64■□□□□ 0.74
TVP23C-203ENST00000428082 PRAMEF22A3QJZ6 481 aa19.64■□□□□ 0.73
TVP23C-203ENST00000428082 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
TVP23C-203ENST00000428082 SMC5Q8IY18 1101 aa19.64■□□□□ 0.73
TVP23C-203ENST00000428082 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.73
TVP23C-203ENST00000428082 C5P01031 1676 aa19.64■□□□□ 0.73
TVP23C-203ENST00000428082 NHSQ6T4R5 1651 aa19.63■□□□□ 0.73
TVP23C-203ENST00000428082 PTF1AQ7RTS3 328 aa19.63■□□□□ 0.73
TVP23C-203ENST00000428082 TMEM57Q8N5G2 664 aa19.63■□□□□ 0.73
TVP23C-203ENST00000428082 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
TVP23C-203ENST00000428082 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
TVP23C-203ENST00000428082 TBC1D32Q96NH3 1257 aa19.62■□□□□ 0.73
TVP23C-203ENST00000428082 SOS1Q07889 1333 aaPredicted RBP19.62■□□□□ 0.73
TVP23C-203ENST00000428082 EP400Q96L91 3159 aa19.61■□□□□ 0.73
TVP23C-203ENST00000428082 NECTIN2Q92692 538 aa19.61■□□□□ 0.73
TVP23C-203ENST00000428082 SEC24BO95487 1268 aa19.61■□□□□ 0.73
TVP23C-203ENST00000428082 HOXB7P09629 217 aa19.61■□□□□ 0.73
TVP23C-203ENST00000428082 BTAF1O14981 1849 aa19.6■□□□□ 0.73
TVP23C-203ENST00000428082 EIF2S2P20042 333 aaKnown RBP19.6■□□□□ 0.73
TVP23C-203ENST00000428082 SNRPA1P09661 255 aaKnown RBP19.59■□□□□ 0.73
TVP23C-203ENST00000428082 HDGFL1Q5TGJ6 251 aa19.59■□□□□ 0.73
TVP23C-203ENST00000428082 FAM196AQ6ZSG2 479 aa19.59■□□□□ 0.73
TVP23C-203ENST00000428082 MRPL50Q8N5N7 158 aaKnown RBP19.59■□□□□ 0.73
TVP23C-203ENST00000428082 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.72
TVP23C-203ENST00000428082 CCDC30Q5VVM6 783 aa19.57■□□□□ 0.72
TVP23C-203ENST00000428082 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
TVP23C-203ENST00000428082 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
TVP23C-203ENST00000428082 GSE1Q14687 1217 aa19.56■□□□□ 0.72
TVP23C-203ENST00000428082 GCC1Q96CN9 775 aa19.56■□□□□ 0.72
TVP23C-203ENST00000428082 SLC4A9Q96Q91 983 aa19.56■□□□□ 0.72
TVP23C-203ENST00000428082 PALLDQ8WX93 1383 aa19.56■□□□□ 0.72
TVP23C-203ENST00000428082 CACNA1FO60840 1977 aa19.55■□□□□ 0.72
TVP23C-203ENST00000428082 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
TVP23C-203ENST00000428082 API5Q9BZZ5 524 aaKnown RBP19.55■□□□□ 0.72
TVP23C-203ENST00000428082 NUCB1Q02818 461 aa19.55■□□□□ 0.72
TVP23C-203ENST00000428082 STK31Q9BXU1 1019 aa19.55■□□□□ 0.72
TVP23C-203ENST00000428082 VSIG10Q8N0Z9 540 aa19.54■□□□□ 0.72
TVP23C-203ENST00000428082 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
TVP23C-203ENST00000428082 CHPF2Q9P2E5 772 aa19.54■□□□□ 0.72
TVP23C-203ENST00000428082 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
TVP23C-203ENST00000428082 TJP1Q07157 1748 aa19.53■□□□□ 0.72
TVP23C-203ENST00000428082 TRIM37O94972 964 aa19.53■□□□□ 0.72
TVP23C-203ENST00000428082 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
TVP23C-203ENST00000428082 ZBTB7BO15156 539 aaPredicted RBP19.52■□□□□ 0.72
TVP23C-203ENST00000428082 ANXA1P04083 346 aa19.52■□□□□ 0.72
TVP23C-203ENST00000428082 G2E3Q7L622 706 aa19.52■□□□□ 0.72
TVP23C-203ENST00000428082 CHMP4AQ9BY43 222 aa19.52■□□□□ 0.72
TVP23C-203ENST00000428082 ABCC4O15439 1325 aa19.52■□□□□ 0.71
TVP23C-203ENST00000428082 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
TVP23C-203ENST00000428082 EIF5BO60841 1220 aaKnown RBP19.51■□□□□ 0.71
TVP23C-203ENST00000428082 SIK1P57059 783 aa19.51■□□□□ 0.71
TVP23C-203ENST00000428082 PROSER3Q2NL68 480 aa19.51■□□□□ 0.71
TVP23C-203ENST00000428082 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
TVP23C-203ENST00000428082 C22orf23Q9BZE7 217 aa19.51■□□□□ 0.71
TVP23C-203ENST00000428082 DBF4Q9UBU7 674 aaPredicted RBP19.51■□□□□ 0.71
TVP23C-203ENST00000428082 PIP4K2AP48426 406 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-203ENST00000428082 PDIA6Q15084 440 aa19.5■□□□□ 0.71
TVP23C-203ENST00000428082 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
TVP23C-203ENST00000428082 TEX13AQ9BXU3 409 aaPredicted RBP19.49■□□□□ 0.71
TVP23C-203ENST00000428082 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
TVP23C-203ENST00000428082 LY75O60449 1722 aa19.49■□□□□ 0.71
TVP23C-203ENST00000428082 DDX21Q9NR30 783 aaKnown RBP eCLIP19.49■□□□□ 0.71
TVP23C-203ENST00000428082 CICQ96RK0 1608 aaPredicted RBP19.48■□□□□ 0.71
TVP23C-203ENST00000428082 ZNF831Q5JPB2 1677 aa19.48■□□□□ 0.71
TVP23C-203ENST00000428082 A1BGP04217 495 aa19.48■□□□□ 0.71
TVP23C-203ENST00000428082 ITPK1Q13572 414 aa19.48■□□□□ 0.71
TVP23C-203ENST00000428082 MYL6BP14649 208 aa19.47■□□□□ 0.71
TVP23C-203ENST00000428082 FLIIQ13045 1269 aa19.47■□□□□ 0.71
TVP23C-203ENST00000428082 NBPF26B4DH59 902 aa19.47■□□□□ 0.71
TVP23C-203ENST00000428082 FRAT2O75474 233 aaPredicted RBP19.47■□□□□ 0.71
TVP23C-203ENST00000428082 CYP19A1P11511 503 aaPredicted RBP19.47■□□□□ 0.71
TVP23C-203ENST00000428082 KCNQ4P56696 695 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms