RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
AC055811.2-201ENST00000427497 PDGFDQ9GZP0 370 aaPredicted RBP22.9■■□□□ 1.26
AC055811.2-201ENST00000427497 PRIM1P49642 420 aaKnown RBP22.89■■□□□ 1.25
AC055811.2-201ENST00000427497 SYTL4Q96C24 671 aaPredicted RBP22.89■■□□□ 1.25
AC055811.2-201ENST00000427497 TCERG1O14776 1098 aaKnown RBP22.88■■□□□ 1.25
AC055811.2-201ENST00000427497 CYP27B1O15528 508 aa22.88■■□□□ 1.25
AC055811.2-201ENST00000427497 MRC1P22897 1456 aa22.87■■□□□ 1.25
AC055811.2-201ENST00000427497 LRRC4BQ9NT99 713 aa22.87■■□□□ 1.25
AC055811.2-201ENST00000427497 BTBD11A6QL63 1104 aa22.86■■□□□ 1.25
AC055811.2-201ENST00000427497 EIF4A1P60842 406 aaKnown RBP22.86■■□□□ 1.25
AC055811.2-201ENST00000427497 LY75O60449 1722 aa22.85■■□□□ 1.25
AC055811.2-201ENST00000427497 PCDH11XQ9BZA7 1347 aa22.85■■□□□ 1.25
AC055811.2-201ENST00000427497 PCDH11YQ9BZA8 1340 aa22.85■■□□□ 1.25
AC055811.2-201ENST00000427497 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 DCAF5Q96JK2 942 aa22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 CACNA1FO60840 1977 aa22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 ABCC4O15439 1325 aa22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 KDM2BQ8NHM5 1336 aa22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 SLC27A3Q5K4L6 730 aa22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 TMEM57Q8N5G2 664 aa22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 PPP1R1BQ9UD71 204 aaPredicted RBP22.84■■□□□ 1.25
AC055811.2-201ENST00000427497 ZBTB7AO95365 584 aa22.83■■□□□ 1.24
AC055811.2-201ENST00000427497 HOXB7P09629 217 aa22.83■■□□□ 1.24
AC055811.2-201ENST00000427497 API5Q9BZZ5 524 aaKnown RBP22.83■■□□□ 1.24
AC055811.2-201ENST00000427497 SLC52A2Q9HAB3 445 aa22.83■■□□□ 1.24
AC055811.2-201ENST00000427497 DDX19BQ9UMR2 479 aa22.83■■□□□ 1.24
AC055811.2-201ENST00000427497 HEG1Q9ULI3 1381 aa22.82■■□□□ 1.24
AC055811.2-201ENST00000427497 KCNQ3O43525 872 aa22.81■■□□□ 1.24
AC055811.2-201ENST00000427497 ZNF827Q17R98 1081 aa22.81■■□□□ 1.24
AC055811.2-201ENST00000427497 CCDC30Q5VVM6 783 aa22.81■■□□□ 1.24
AC055811.2-201ENST00000427497 PTPRCP08575 1304 aa22.81■■□□□ 1.24
AC055811.2-201ENST00000427497 SLC4A2P04920 1241 aa22.8■■□□□ 1.24
AC055811.2-201ENST00000427497 ITPRIPQ8IWB1 547 aa22.8■■□□□ 1.24
AC055811.2-201ENST00000427497 QSER1Q2KHR3 1735 aa22.79■■□□□ 1.24
AC055811.2-201ENST00000427497 TOGARAM1Q9Y4F4 1720 aa22.79■■□□□ 1.24
AC055811.2-201ENST00000427497 NKX1-1Q15270 411 aaPredicted RBP22.79■■□□□ 1.24
AC055811.2-201ENST00000427497 CENPQQ7L2Z9 268 aaPredicted RBP22.79■■□□□ 1.24
AC055811.2-201ENST00000427497 ITGB4P16144 1822 aa22.79■■□□□ 1.24
AC055811.2-201ENST00000427497 PTGER2P43116 358 aa22.78■■□□□ 1.24
AC055811.2-201ENST00000427497 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
AC055811.2-201ENST00000427497 ATF5Q9Y2D1 282 aaPredicted RBP22.78■■□□□ 1.24
AC055811.2-201ENST00000427497 KCNQ4P56696 695 aa22.77■■□□□ 1.24
AC055811.2-201ENST00000427497 STK31Q9BXU1 1019 aa22.77■■□□□ 1.24
AC055811.2-201ENST00000427497 NFATC2IPQ8NCF5 419 aa22.77■■□□□ 1.24
AC055811.2-201ENST00000427497 CHMP4AQ9BY43 222 aa22.77■■□□□ 1.24
AC055811.2-201ENST00000427497 MTFR1LQ9H019 292 aa22.77■■□□□ 1.24
AC055811.2-201ENST00000427497 TUBGCP6Q96RT7 1819 aa22.76■■□□□ 1.23
AC055811.2-201ENST00000427497 PCDHB15Q9Y5E8 787 aa22.76■■□□□ 1.23
AC055811.2-201ENST00000427497 HDGFL1Q5TGJ6 251 aa22.75■■□□□ 1.23
AC055811.2-201ENST00000427497 G2E3Q7L622 706 aa22.75■■□□□ 1.23
AC055811.2-201ENST00000427497 ZBTB40Q9NUA8 1239 aa22.75■■□□□ 1.23
AC055811.2-201ENST00000427497 ZNF790Q6PG37 636 aa22.74■■□□□ 1.23
AC055811.2-201ENST00000427497 CCNL1Q9UK58 526 aaPredicted RBP22.74■■□□□ 1.23
AC055811.2-201ENST00000427497 GIGYF1O75420 1035 aaPredicted RBP22.74■■□□□ 1.23
AC055811.2-201ENST00000427497 INTS3Q68E01 1043 aaKnown RBP22.74■■□□□ 1.23
AC055811.2-201ENST00000427497 ERVV-2B6SEH9 535 aa22.73■■□□□ 1.23
AC055811.2-201ENST00000427497 ZBTB7BO15156 539 aaPredicted RBP22.72■■□□□ 1.23
AC055811.2-201ENST00000427497 IGHDP01880 384 aa22.72■■□□□ 1.23
AC055811.2-201ENST00000427497 CABP4P57796 275 aa22.72■■□□□ 1.23
AC055811.2-201ENST00000427497 SGIP1Q9BQI5 828 aa22.72■■□□□ 1.23
AC055811.2-201ENST00000427497 CHMP4BQ9H444 224 aaKnown RBP22.72■■□□□ 1.23
AC055811.2-201ENST00000427497 NECTIN2Q92692 538 aa22.71■■□□□ 1.23
AC055811.2-201ENST00000427497 C5P01031 1676 aa22.71■■□□□ 1.23
AC055811.2-201ENST00000427497 PNPLA7Q6ZV29 1317 aa22.71■■□□□ 1.23
AC055811.2-201ENST00000427497 FLIIQ13045 1269 aa22.71■■□□□ 1.23
AC055811.2-201ENST00000427497 SLC39A6Q13433 755 aa22.71■■□□□ 1.23
AC055811.2-201ENST00000427497 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
AC055811.2-201ENST00000427497 TAF1LQ8IZX4 1826 aa22.7■■□□□ 1.22
AC055811.2-201ENST00000427497 PALLDQ8WX93 1383 aa22.7■■□□□ 1.22
AC055811.2-201ENST00000427497 N4BP2Q86UW6 1770 aaPredicted RBP22.69■■□□□ 1.22
AC055811.2-201ENST00000427497 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
AC055811.2-201ENST00000427497 UBR2Q8IWV8 1755 aa22.68■■□□□ 1.22
AC055811.2-201ENST00000427497 SLC16A10Q8TF71 515 aa22.68■■□□□ 1.22
AC055811.2-201ENST00000427497 PIGBQ92521 554 aa22.68■■□□□ 1.22
AC055811.2-201ENST00000427497 COL24A1Q17RW2 1714 aa22.67■■□□□ 1.22
AC055811.2-201ENST00000427497 CHPF2Q9P2E5 772 aa22.67■■□□□ 1.22
AC055811.2-201ENST00000427497 SMARCC1Q92922 1105 aaPredicted RBP22.66■■□□□ 1.22
AC055811.2-201ENST00000427497 ZNF496Q96IT1 587 aaPredicted RBP22.66■■□□□ 1.22
AC055811.2-201ENST00000427497 PXDNLA1KZ92 1463 aa22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 HDAC1Q13547 482 aaPredicted RBP22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 TTC5Q8N0Z6 440 aa22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 FHDC1Q9C0D6 1143 aaPredicted RBP22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 RWDD1Q9H446 243 aaPredicted RBP22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 DBF4Q9UBU7 674 aaPredicted RBP22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 FKBP5Q13451 457 aaPredicted RBP22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 ARXQ96QS3 562 aa22.65■■□□□ 1.22
AC055811.2-201ENST00000427497 F6X3S4 739 aa22.64■■□□□ 1.21
AC055811.2-201ENST00000427497 CCT4P50991 539 aaKnown RBP22.64■■□□□ 1.21
AC055811.2-201ENST00000427497 FMNL2Q96PY5 1086 aa22.64■■□□□ 1.21
AC055811.2-201ENST00000427497 PHAXQ9H814 394 aaKnown RBP22.64■■□□□ 1.21
AC055811.2-201ENST00000427497 TSHZ2Q9NRE2 1034 aa22.64■■□□□ 1.21
AC055811.2-201ENST00000427497 TMOD3Q9NYL9 352 aa22.64■■□□□ 1.21
AC055811.2-201ENST00000427497 HMGB2P26583 209 aaKnown RBP22.63■■□□□ 1.21
AC055811.2-201ENST00000427497 SYT17Q9BSW7 474 aa22.63■■□□□ 1.21
AC055811.2-201ENST00000427497 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
AC055811.2-201ENST00000427497 KCPQ6ZWJ8 1503 aa22.62■■□□□ 1.21
AC055811.2-201ENST00000427497 C4BP0C0L5 1744 aa22.62■■□□□ 1.21
AC055811.2-201ENST00000427497 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
AC055811.2-201ENST00000427497 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms