RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 PIP4K2BP78356 416 aa33.28■■■□□ 2.92
SH3GL3-202ENST00000427482 ANKRD45Q5TZF3 282 aa33.28■■■□□ 2.92
SH3GL3-202ENST00000427482 SNRPA1P09661 255 aaKnown RBP33.28■■■□□ 2.92
SH3GL3-202ENST00000427482 SRCIN1Q9C0H9 1055 aa33.28■■■□□ 2.92
SH3GL3-202ENST00000427482 PDIA6Q15084 440 aa33.27■■■□□ 2.92
SH3GL3-202ENST00000427482 USP44Q9H0E7 712 aa33.25■■■□□ 2.91
SH3GL3-202ENST00000427482 BEND3Q5T5X7 828 aa33.25■■■□□ 2.91
SH3GL3-202ENST00000427482 HMMRO75330 724 aa33.24■■■□□ 2.91
SH3GL3-202ENST00000427482 KCPQ6ZWJ8 1503 aa33.23■■■□□ 2.91
SH3GL3-202ENST00000427482 NWD2Q9ULI1 1742 aa33.23■■■□□ 2.91
SH3GL3-202ENST00000427482 KSR2Q6VAB6 950 aa33.23■■■□□ 2.91
SH3GL3-202ENST00000427482 ITGB4P16144 1822 aa33.21■■■□□ 2.91
SH3GL3-202ENST00000427482 ADAMTS2O95450 1211 aa33.21■■■□□ 2.91
SH3GL3-202ENST00000427482 UBTFL1P0CB47 393 aaPredicted RBP33.2■■■□□ 2.91
SH3GL3-202ENST00000427482 NPM2Q86SE8 214 aaKnown RBP33.2■■■□□ 2.91
SH3GL3-202ENST00000427482 MAP3K2Q9Y2U5 619 aa33.2■■■□□ 2.91
SH3GL3-202ENST00000427482 USP16Q9Y5T5 823 aa33.2■■■□□ 2.91
SH3GL3-202ENST00000427482 TNS2Q63HR2 1409 aa33.2■■■□□ 2.91
SH3GL3-202ENST00000427482 UBAP1LF5GYI3 381 aa33.18■■■□□ 2.9
SH3GL3-202ENST00000427482 DDX58O95786 925 aaKnown RBP33.18■■■□□ 2.9
SH3GL3-202ENST00000427482 LRRFIP2Q9Y608 721 aaKnown RBP33.18■■■□□ 2.9
SH3GL3-202ENST00000427482 LRP6O75581 1613 aa33.18■■■□□ 2.9
SH3GL3-202ENST00000427482 ALDH1L1O75891 902 aa33.16■■■□□ 2.9
SH3GL3-202ENST00000427482 ATP8B2P98198 1209 aa33.16■■■□□ 2.9
SH3GL3-202ENST00000427482 LRP10Q7Z4F1 713 aa33.15■■■□□ 2.9
SH3GL3-202ENST00000427482 MSH5O43196 834 aa33.14■■■□□ 2.9
SH3GL3-202ENST00000427482 MYL6BP14649 208 aa33.14■■■□□ 2.9
SH3GL3-202ENST00000427482 NUTM2BA6NNL0 878 aaPredicted RBP33.13■■■□□ 2.89
SH3GL3-202ENST00000427482 NUTM2EB1AL46 878 aaPredicted RBP33.13■■■□□ 2.89
SH3GL3-202ENST00000427482 NUTM2AQ8IVF1 878 aaPredicted RBP33.13■■■□□ 2.89
SH3GL3-202ENST00000427482 AIMP1Q12904 312 aaKnown RBP33.12■■■□□ 2.89
SH3GL3-202ENST00000427482 TMOD3Q9NYL9 352 aa33.12■■■□□ 2.89
SH3GL3-202ENST00000427482 SLIT2O94813 1529 aa33.12■■■□□ 2.89
SH3GL3-202ENST00000427482 ERBB4Q15303 1308 aa33.12■■■□□ 2.89
SH3GL3-202ENST00000427482 SPATA31A1Q5TZJ5 1347 aa33.12■■■□□ 2.89
SH3GL3-202ENST00000427482 XAGE3Q8WTP9 111 aa33.12■■■□□ 2.89
SH3GL3-202ENST00000427482 IPO9Q96P70 1041 aaKnown RBP33.12■■■□□ 2.89
SH3GL3-202ENST00000427482 ARFGEF2Q9Y6D5 1785 aa33.11■■■□□ 2.89
SH3GL3-202ENST00000427482 PNMA6EA0A0J9YXQ4 647 aa33.11■■■□□ 2.89
SH3GL3-202ENST00000427482 NBPF7P0C2Y1 421 aaPredicted RBP33.11■■■□□ 2.89
SH3GL3-202ENST00000427482 ZBTB47Q9UFB7 747 aaPredicted RBP33.11■■■□□ 2.89
SH3GL3-202ENST00000427482 LINS1Q8NG48 757 aa33.09■■■□□ 2.89
SH3GL3-202ENST00000427482 CDCA7Q9BWT1 371 aaPredicted RBP33.09■■■□□ 2.89
SH3GL3-202ENST00000427482 THRAP3Q9Y2W1 955 aaKnown RBP33.09■■■□□ 2.89
SH3GL3-202ENST00000427482 EXOC5O00471 708 aa33.09■■■□□ 2.89
SH3GL3-202ENST00000427482 COPS6Q7L5N1 327 aa33.09■■■□□ 2.89
SH3GL3-202ENST00000427482 IBTKQ9P2D0 1353 aaPredicted RBP33.08■■■□□ 2.89
SH3GL3-202ENST00000427482 SEC24BO95487 1268 aa33.08■■■□□ 2.89
SH3GL3-202ENST00000427482 BMP2KLQ5H9B9 411 aa33.08■■■□□ 2.89
SH3GL3-202ENST00000427482 RIC3Q7Z5B4 369 aa33.08■■■□□ 2.89
SH3GL3-202ENST00000427482 SSH3Q8TE77 659 aa33.06■■■□□ 2.88
SH3GL3-202ENST00000427482 AFDNP55196 1824 aaKnown RBP33.06■■■□□ 2.88
SH3GL3-202ENST00000427482 DOT1LQ8TEK3 1739 aa33.05■■■□□ 2.88
SH3GL3-202ENST00000427482 CWF19L2Q2TBE0 894 aaKnown RBP33.05■■■□□ 2.88
SH3GL3-202ENST00000427482 PLEKHM2Q8IWE5 1019 aa33.05■■■□□ 2.88
SH3GL3-202ENST00000427482 PIP4K2AP48426 406 aaPredicted RBP33.05■■■□□ 2.88
SH3GL3-202ENST00000427482 PIGBQ92521 554 aa33.05■■■□□ 2.88
SH3GL3-202ENST00000427482 PTCD1O75127 700 aaKnown RBP33.04■■■□□ 2.88
SH3GL3-202ENST00000427482 SPATA31A5Q5VU36 1347 aa33.04■■■□□ 2.88
SH3GL3-202ENST00000427482 SPATA31A7Q8IWB4 1347 aa33.04■■■□□ 2.88
SH3GL3-202ENST00000427482 JCADQ9P266 1359 aa33.03■■■□□ 2.88
SH3GL3-202ENST00000427482 SMARCA5O60264 1052 aaPredicted RBP33.03■■■□□ 2.88
SH3GL3-202ENST00000427482 C9orf78Q9NZ63 289 aaPredicted RBP33.03■■■□□ 2.88
SH3GL3-202ENST00000427482 EXOC6BQ9Y2D4 811 aa33.03■■■□□ 2.88
SH3GL3-202ENST00000427482 NUP188Q5SRE5 1749 aa33.03■■■□□ 2.88
SH3GL3-202ENST00000427482 APBB1O00213 710 aa33.02■■■□□ 2.88
SH3GL3-202ENST00000427482 POLA2Q14181 598 aa33.02■■■□□ 2.88
SH3GL3-202ENST00000427482 ANKRD13DQ6ZTN6 518 aa33.02■■■□□ 2.88
SH3GL3-202ENST00000427482 METTL22Q9BUU2 404 aaPredicted RBP33.02■■■□□ 2.88
SH3GL3-202ENST00000427482 UTYO14607 1347 aa33.02■■■□□ 2.88
SH3GL3-202ENST00000427482 BCL9O00512 1426 aa33.02■■■□□ 2.88
SH3GL3-202ENST00000427482 PPP1R42Q7Z4L9 355 aa33.02■■■□□ 2.88
SH3GL3-202ENST00000427482 KAT6BQ8WYB5 2073 aa33.01■■■□□ 2.88
SH3GL3-202ENST00000427482 NBPF26B4DH59 902 aa33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 IGKV5-2P06315 115 aa33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 NEXNQ0ZGT2 675 aa33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 NBPF14Q5TI25 921 aa33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 NBPF10Q6P3W6 841 aaKnown RBP33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 C16orf71Q8IYS4 520 aaPredicted RBP33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 NBPF15Q8N660 670 aa33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 HDAC5Q9UQL6 1122 aa33.01■■■□□ 2.87
SH3GL3-202ENST00000427482 GRM8O00222 908 aa32.99■■■□□ 2.87
SH3GL3-202ENST00000427482 ATG3Q9NT62 314 aa32.99■■■□□ 2.87
SH3GL3-202ENST00000427482 ASAP1Q9ULH1 1129 aa32.99■■■□□ 2.87
SH3GL3-202ENST00000427482 MTX1Q13505 466 aa32.98■■■□□ 2.87
SH3GL3-202ENST00000427482 NEURL1BA8MQ27 555 aa32.98■■■□□ 2.87
SH3GL3-202ENST00000427482 VSIG10Q8N0Z9 540 aa32.98■■■□□ 2.87
SH3GL3-202ENST00000427482 OTUD7AQ8TE49 926 aaPredicted RBP32.98■■■□□ 2.87
SH3GL3-202ENST00000427482 MYD88Q99836 296 aa32.98■■■□□ 2.87
SH3GL3-202ENST00000427482 LRRCC1Q9C099 1032 aa32.97■■■□□ 2.87
SH3GL3-202ENST00000427482 SRGAP3O43295 1099 aa32.96■■■□□ 2.87
SH3GL3-202ENST00000427482 DDB1Q16531 1140 aa32.96■■■□□ 2.87
SH3GL3-202ENST00000427482 BARGINQ6ZT62 677 aa32.96■■■□□ 2.87
SH3GL3-202ENST00000427482 PLBD2Q8NHP8 589 aa32.96■■■□□ 2.87
SH3GL3-202ENST00000427482 DDRGK1Q96HY6 314 aa32.96■■■□□ 2.87
SH3GL3-202ENST00000427482 UPF2Q9HAU5 1272 aaKnown RBP32.95■■■□□ 2.87
SH3GL3-202ENST00000427482 A1BGP04217 495 aa32.95■■■□□ 2.86
SH3GL3-202ENST00000427482 TTC22Q5TAA0 569 aa32.95■■■□□ 2.86
SH3GL3-202ENST00000427482 GSPT1P15170 499 aaKnown RBP32.94■■■□□ 2.86
SH3GL3-202ENST00000427482 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms