RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 NCBP3Q53F19 620 aaKnown RBP29.56■■■□□ 2.32
SDHAP1-204ENST00000427415 AMIGO3Q86WK7 504 aa29.56■■■□□ 2.32
SDHAP1-204ENST00000427415 COL24A1Q17RW2 1714 aa29.55■■■□□ 2.32
SDHAP1-204ENST00000427415 CCDC27Q2M243 656 aa29.55■■■□□ 2.32
SDHAP1-204ENST00000427415 INTS5Q6P9B9 1019 aaKnown RBP29.55■■■□□ 2.32
SDHAP1-204ENST00000427415 LAS1LQ9Y4W2 734 aaKnown RBP29.54■■■□□ 2.32
SDHAP1-204ENST00000427415 EIF4A1P60842 406 aaKnown RBP29.53■■■□□ 2.32
SDHAP1-204ENST00000427415 TRAPPC3LQ5T215 181 aa29.53■■■□□ 2.32
SDHAP1-204ENST00000427415 MIER1Q8N108 512 aa29.52■■■□□ 2.32
SDHAP1-204ENST00000427415 ATF5Q9Y2D1 282 aaPredicted RBP29.52■■■□□ 2.32
SDHAP1-204ENST00000427415 CHL1O00533 1208 aa29.51■■■□□ 2.31
SDHAP1-204ENST00000427415 SMIM5Q71RC9 77 aa29.51■■■□□ 2.31
SDHAP1-204ENST00000427415 CFAP44Q96MT7 982 aa29.51■■■□□ 2.31
SDHAP1-204ENST00000427415 ZBTB1Q9Y2K1 713 aa29.51■■■□□ 2.31
SDHAP1-204ENST00000427415 NGEFQ8N5V2 710 aa29.5■■■□□ 2.31
SDHAP1-204ENST00000427415 SOS1Q07889 1333 aaPredicted RBP29.49■■■□□ 2.31
SDHAP1-204ENST00000427415 IFT57Q9NWB7 429 aa29.49■■■□□ 2.31
SDHAP1-204ENST00000427415 SENP3-EIF4A1A0A087X0R7 540 aa29.48■■■□□ 2.31
SDHAP1-204ENST00000427415 RFC4P35249 363 aa29.48■■■□□ 2.31
SDHAP1-204ENST00000427415 GNAI1P63096 354 aa29.48■■■□□ 2.31
SDHAP1-204ENST00000427415 WWC1Q8IX03 1113 aa29.48■■■□□ 2.31
SDHAP1-204ENST00000427415 ARHGEF1Q92888 912 aaKnown RBP29.48■■■□□ 2.31
SDHAP1-204ENST00000427415 USP16Q9Y5T5 823 aa29.48■■■□□ 2.31
SDHAP1-204ENST00000427415 PRAMEF22A3QJZ6 481 aa29.47■■■□□ 2.31
SDHAP1-204ENST00000427415 GIGYF1O75420 1035 aaPredicted RBP29.47■■■□□ 2.31
SDHAP1-204ENST00000427415 CANXP27824 592 aaKnown RBP29.47■■■□□ 2.31
SDHAP1-204ENST00000427415 COL15A1P39059 1388 aa29.47■■■□□ 2.31
SDHAP1-204ENST00000427415 SRCAPQ6ZRS2 3230 aa29.47■■■□□ 2.31
SDHAP1-204ENST00000427415 POLD1P28340 1107 aa29.45■■■□□ 2.31
SDHAP1-204ENST00000427415 PTGER2P43116 358 aa29.45■■■□□ 2.31
SDHAP1-204ENST00000427415 PPP1R1BQ9UD71 204 aaPredicted RBP29.45■■■□□ 2.31
SDHAP1-204ENST00000427415 ZNF853P0CG23 659 aa29.44■■■□□ 2.3
SDHAP1-204ENST00000427415 A1BGP04217 495 aa29.43■■■□□ 2.3
SDHAP1-204ENST00000427415 IL6STP40189 918 aaPredicted RBP29.43■■■□□ 2.3
SDHAP1-204ENST00000427415 MSL1Q68DK7 614 aa29.43■■■□□ 2.3
SDHAP1-204ENST00000427415 NPM2Q86SE8 214 aaKnown RBP29.43■■■□□ 2.3
SDHAP1-204ENST00000427415 SGIP1Q9BQI5 828 aa29.43■■■□□ 2.3
SDHAP1-204ENST00000427415 MBIPQ9NS73 344 aa29.43■■■□□ 2.3
SDHAP1-204ENST00000427415 SALL2Q9Y467 1007 aaPredicted RBP29.43■■■□□ 2.3
SDHAP1-204ENST00000427415 EIF5P55010 431 aaKnown RBP29.42■■■□□ 2.3
SDHAP1-204ENST00000427415 IL16Q14005 1332 aa29.42■■■□□ 2.3
SDHAP1-204ENST00000427415 A0A087WZG4 1122 aa29.41■■■□□ 2.3
SDHAP1-204ENST00000427415 ZNF330Q9Y3S2 320 aaPredicted RBP29.41■■■□□ 2.3
SDHAP1-204ENST00000427415 USP42Q9H9J4 1324 aaKnown RBP29.41■■■□□ 2.3
SDHAP1-204ENST00000427415 ZPR1O75312 459 aa29.4■■■□□ 2.3
SDHAP1-204ENST00000427415 WDR63Q8IWG1 891 aa29.39■■■□□ 2.3
SDHAP1-204ENST00000427415 SCN7AQ01118 1682 aa29.38■■■□□ 2.29
SDHAP1-204ENST00000427415 NLGN1Q8N2Q7 840 aa29.38■■■□□ 2.29
SDHAP1-204ENST00000427415 HOXB7P09629 217 aa29.37■■■□□ 2.29
SDHAP1-204ENST00000427415 GYS1P13807 737 aa29.37■■■□□ 2.29
SDHAP1-204ENST00000427415 ARXQ96QS3 562 aa29.37■■■□□ 2.29
SDHAP1-204ENST00000427415 SRP68Q9UHB9 627 aaKnown RBP29.37■■■□□ 2.29
SDHAP1-204ENST00000427415 NARFQ9UHQ1 456 aa29.37■■■□□ 2.29
SDHAP1-204ENST00000427415 ERBB4Q15303 1308 aa29.37■■■□□ 2.29
SDHAP1-204ENST00000427415 BCORQ6W2J9 1755 aa29.36■■■□□ 2.29
SDHAP1-204ENST00000427415 PIP4K2AP48426 406 aaPredicted RBP29.35■■■□□ 2.29
SDHAP1-204ENST00000427415 NBPF26B4DH59 902 aa29.34■■■□□ 2.29
SDHAP1-204ENST00000427415 KRT24Q2M2I5 525 aa29.34■■■□□ 2.29
SDHAP1-204ENST00000427415 USPL1Q5W0Q7 1092 aa29.34■■■□□ 2.29
SDHAP1-204ENST00000427415 NBPF10Q6P3W6 841 aaKnown RBP29.34■■■□□ 2.29
SDHAP1-204ENST00000427415 NBPF15Q8N660 670 aa29.34■■■□□ 2.29
SDHAP1-204ENST00000427415 EIF2S2P20042 333 aaKnown RBP29.33■■■□□ 2.29
SDHAP1-204ENST00000427415 DUSP27Q5VZP5 1158 aa29.31■■■□□ 2.28
SDHAP1-204ENST00000427415 DZIP3Q86Y13 1208 aaKnown RBP29.31■■■□□ 2.28
SDHAP1-204ENST00000427415 TSR2Q969E8 191 aaKnown RBP29.31■■■□□ 2.28
SDHAP1-204ENST00000427415 MMP10P09238 476 aa29.29■■■□□ 2.28
SDHAP1-204ENST00000427415 FKBP8Q14318 412 aa29.29■■■□□ 2.28
SDHAP1-204ENST00000427415 HDGFL1Q5TGJ6 251 aa29.29■■■□□ 2.28
SDHAP1-204ENST00000427415 TBC1D2BQ9UPU7 963 aa29.29■■■□□ 2.28
SDHAP1-204ENST00000427415 ZNF521Q96K83 1311 aa29.28■■■□□ 2.28
SDHAP1-204ENST00000427415 MYL6BP14649 208 aa29.28■■■□□ 2.28
SDHAP1-204ENST00000427415 FANCIQ9NVI1 1328 aa29.27■■■□□ 2.28
SDHAP1-204ENST00000427415 CHMP4AQ9BY43 222 aa29.27■■■□□ 2.28
SDHAP1-204ENST00000427415 MYH16Q9H6N6 1097 aa29.27■■■□□ 2.28
SDHAP1-204ENST00000427415 CAMTA2O94983 1202 aa29.26■■■□□ 2.27
SDHAP1-204ENST00000427415 NECTIN2Q92692 538 aa29.26■■■□□ 2.27
SDHAP1-204ENST00000427415 PARP3Q9Y6F1 533 aa29.26■■■□□ 2.27
SDHAP1-204ENST00000427415 FHDC1Q9C0D6 1143 aaPredicted RBP29.25■■■□□ 2.27
SDHAP1-204ENST00000427415 BCL2L12Q9HB09 334 aa29.25■■■□□ 2.27
SDHAP1-204ENST00000427415 ELL2O00472 640 aaPredicted RBP29.24■■■□□ 2.27
SDHAP1-204ENST00000427415 C8orf58Q8NAV2 365 aa29.24■■■□□ 2.27
SDHAP1-204ENST00000427415 DDX21Q9NR30 783 aaKnown RBP eCLIP29.24■■■□□ 2.27
SDHAP1-204ENST00000427415 ZNF652Q9Y2D9 606 aa29.24■■■□□ 2.27
SDHAP1-204ENST00000427415 NUP98P52948 1817 aa29.23■■■□□ 2.27
SDHAP1-204ENST00000427415 RGL2O15211 777 aa29.23■■■□□ 2.27
SDHAP1-204ENST00000427415 GOLGA2Q08379 1002 aa29.23■■■□□ 2.27
SDHAP1-204ENST00000427415 PDIA6Q15084 440 aa29.23■■■□□ 2.27
SDHAP1-204ENST00000427415 KLHL34Q8N239 644 aa29.23■■■□□ 2.27
SDHAP1-204ENST00000427415 KIF6Q6ZMV9 814 aa29.22■■■□□ 2.27
SDHAP1-204ENST00000427415 CHPF2Q9P2E5 772 aa29.22■■■□□ 2.27
SDHAP1-204ENST00000427415 DBF4Q9UBU7 674 aaPredicted RBP29.22■■■□□ 2.27
SDHAP1-204ENST00000427415 AFDNP55196 1824 aaKnown RBP29.22■■■□□ 2.27
SDHAP1-204ENST00000427415 KIF13BQ9NQT8 1826 aa29.22■■■□□ 2.27
SDHAP1-204ENST00000427415 CLEC4GQ6UXB4 293 aa29.21■■■□□ 2.27
SDHAP1-204ENST00000427415 TM4SF1P30408 202 aa29.2■■■□□ 2.26
SDHAP1-204ENST00000427415 NFIXQ14938 502 aa29.2■■■□□ 2.26
SDHAP1-204ENST00000427415 PROSER3Q2NL68 480 aa29.2■■■□□ 2.26
SDHAP1-204ENST00000427415 SPINK5Q9NQ38 1064 aaPredicted RBP29.2■■■□□ 2.26
SDHAP1-204ENST00000427415 CACNA1FO60840 1977 aa29.2■■■□□ 2.26
SDHAP1-204ENST00000427415 MAP3K15Q6ZN16 1313 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms