RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 ZNF496Q96IT1 587 aaPredicted RBP9.59□□□□□ -0.87
FARP1-204ENST00000427404 FMNL2Q96PY5 1086 aa9.59□□□□□ -0.87
FARP1-204ENST00000427404 TEX13AQ9BXU3 409 aaPredicted RBP9.59□□□□□ -0.87
FARP1-204ENST00000427404 C10orf71Q711Q0 1435 aa9.58□□□□□ -0.88
FARP1-204ENST00000427404 STARD3NLO95772 234 aa9.58□□□□□ -0.88
FARP1-204ENST00000427404 MMP10P09238 476 aa9.58□□□□□ -0.88
FARP1-204ENST00000427404 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
FARP1-204ENST00000427404 MCM10Q7L590 875 aa9.58□□□□□ -0.88
FARP1-204ENST00000427404 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
FARP1-204ENST00000427404 ZBTB1Q9Y2K1 713 aa9.58□□□□□ -0.88
FARP1-204ENST00000427404 COL15A1P39059 1388 aa9.58□□□□□ -0.88
FARP1-204ENST00000427404 MAPK8IP3Q9UPT6 1336 aa9.57□□□□□ -0.88
FARP1-204ENST00000427404 SRP68Q9UHB9 627 aaKnown RBP9.57□□□□□ -0.88
FARP1-204ENST00000427404 GOLGB1Q14789 3259 aaKnown RBP9.57□□□□□ -0.88
FARP1-204ENST00000427404 KDM3BQ7LBC6 1761 aa9.57□□□□□ -0.88
FARP1-204ENST00000427404 KIAA1551Q9HCM1 1747 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 CHD4Q14839 1912 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 SCN7AQ01118 1682 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 KCNQ3O43525 872 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 YY1P25490 414 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
FARP1-204ENST00000427404 DCTN1Q14203 1278 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 TAF7Q15545 349 aaPredicted RBP9.56□□□□□ -0.88
FARP1-204ENST00000427404 GPR162Q16538 588 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 NARFQ9UHQ1 456 aa9.56□□□□□ -0.88
FARP1-204ENST00000427404 PXDNLA1KZ92 1463 aa9.55□□□□□ -0.88
FARP1-204ENST00000427404 A0A087WZG4 1122 aa9.55□□□□□ -0.88
FARP1-204ENST00000427404 ZPR1O75312 459 aa9.55□□□□□ -0.88
FARP1-204ENST00000427404 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
FARP1-204ENST00000427404 FKBP8Q14318 412 aa9.55□□□□□ -0.88
FARP1-204ENST00000427404 PNISRQ8TF01 805 aaKnown RBP9.55□□□□□ -0.88
FARP1-204ENST00000427404 PARP3Q9Y6F1 533 aa9.55□□□□□ -0.88
FARP1-204ENST00000427404 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
FARP1-204ENST00000427404 NRXN2Q9P2S2 1712 aa9.54□□□□□ -0.88
FARP1-204ENST00000427404 GRIN3BO60391 1043 aa9.54□□□□□ -0.88
FARP1-204ENST00000427404 SNRPA1P09661 255 aaKnown RBP9.54□□□□□ -0.88
FARP1-204ENST00000427404 YBX3P16989 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
FARP1-204ENST00000427404 CANXP27824 592 aaKnown RBP9.54□□□□□ -0.88
FARP1-204ENST00000427404 TM4SF1P30408 202 aa9.54□□□□□ -0.88
FARP1-204ENST00000427404 TGFB2P61812 414 aa9.54□□□□□ -0.88
FARP1-204ENST00000427404 DDR1Q08345 913 aa9.54□□□□□ -0.88
FARP1-204ENST00000427404 WDR43Q15061 677 aaKnown RBP eCLIP9.54□□□□□ -0.88
FARP1-204ENST00000427404 USPL1Q5W0Q7 1092 aa9.54□□□□□ -0.88
FARP1-204ENST00000427404 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
FARP1-204ENST00000427404 BCORQ6W2J9 1755 aa9.53□□□□□ -0.88
FARP1-204ENST00000427404 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
FARP1-204ENST00000427404 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
FARP1-204ENST00000427404 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
FARP1-204ENST00000427404 LMOD3Q0VAK6 560 aa9.53□□□□□ -0.88
FARP1-204ENST00000427404 BABAM1Q9NWV8 329 aa9.53□□□□□ -0.88
FARP1-204ENST00000427404 USP16Q9Y5T5 823 aa9.53□□□□□ -0.88
FARP1-204ENST00000427404 RGL2O15211 777 aa9.52□□□□□ -0.89
FARP1-204ENST00000427404 A1BGP04217 495 aa9.52□□□□□ -0.89
FARP1-204ENST00000427404 BRCA1P38398 1863 aaKnown RBP9.52□□□□□ -0.89
FARP1-204ENST00000427404 RIPK4P57078 832 aa9.52□□□□□ -0.89
FARP1-204ENST00000427404 NFIXQ14938 502 aa9.52□□□□□ -0.89
FARP1-204ENST00000427404 POTEHQ6S545 545 aa9.52□□□□□ -0.89
FARP1-204ENST00000427404 PELP1Q8IZL8 1130 aaKnown RBP9.52□□□□□ -0.89
FARP1-204ENST00000427404 RUNDC1Q96C34 613 aa9.52□□□□□ -0.89
FARP1-204ENST00000427404 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.89
FARP1-204ENST00000427404 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.89
FARP1-204ENST00000427404 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
FARP1-204ENST00000427404 PRAMEF22A3QJZ6 481 aa9.51□□□□□ -0.89
FARP1-204ENST00000427404 CAMTA2O94983 1202 aa9.51□□□□□ -0.89
FARP1-204ENST00000427404 EIF4A1P60842 406 aaKnown RBP9.51□□□□□ -0.89
FARP1-204ENST00000427404 MIS18AQ9NYP9 233 aa9.51□□□□□ -0.89
FARP1-204ENST00000427404 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
FARP1-204ENST00000427404 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
FARP1-204ENST00000427404 NPM2Q86SE8 214 aaKnown RBP9.5□□□□□ -0.89
FARP1-204ENST00000427404 CCDC146Q8IYE0 955 aa9.5□□□□□ -0.89
FARP1-204ENST00000427404 CARMIL3Q8ND23 1372 aa9.5□□□□□ -0.89
FARP1-204ENST00000427404 NBPF26B4DH59 902 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 SERPINB2P05120 415 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 DPEP1P16444 411 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 TBC1D9BQ66K14 1250 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 NBPF10Q6P3W6 841 aaKnown RBP9.49□□□□□ -0.89
FARP1-204ENST00000427404 CLEC4GQ6UXB4 293 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
FARP1-204ENST00000427404 NBPF15Q8N660 670 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 TSPYL4Q9UJ04 414 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 ERBB4Q15303 1308 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 ARFGEF1Q9Y6D6 1849 aa9.49□□□□□ -0.89
FARP1-204ENST00000427404 DLEC1Q9Y238 1755 aa9.48□□□□□ -0.89
FARP1-204ENST00000427404 A0A0G2JLW4 131 aa9.48□□□□□ -0.89
FARP1-204ENST00000427404 NPM3O75607 178 aaKnown RBP9.48□□□□□ -0.89
FARP1-204ENST00000427404 KCNA3P22001 575 aa9.48□□□□□ -0.89
FARP1-204ENST00000427404 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
FARP1-204ENST00000427404 RRP7AQ9Y3A4 280 aaKnown RBP9.48□□□□□ -0.89
FARP1-204ENST00000427404 ZNF330Q9Y3S2 320 aaPredicted RBP9.48□□□□□ -0.89
FARP1-204ENST00000427404 CHL1O00533 1208 aa9.47□□□□□ -0.89
FARP1-204ENST00000427404 PIP4K2AP48426 406 aaPredicted RBP9.47□□□□□ -0.89
FARP1-204ENST00000427404 PIM2Q9P1W9 311 aa9.47□□□□□ -0.89
FARP1-204ENST00000427404 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
FARP1-204ENST00000427404 ADCY9O60503 1353 aa9.47□□□□□ -0.89
FARP1-204ENST00000427404 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
FARP1-204ENST00000427404 PRR5LQ6MZQ0 368 aa9.46□□□□□ -0.9
FARP1-204ENST00000427404 BICDL1Q6ZP65 573 aa9.46□□□□□ -0.9
FARP1-204ENST00000427404 SETDB2Q96T68 719 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms