RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 SIPA1L3O60292 1781 aaPredicted RBP16.35■□□□□ 0.21
SMIM12-203ENST00000426886 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
SMIM12-203ENST00000426886 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
SMIM12-203ENST00000426886 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
SMIM12-203ENST00000426886 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
SMIM12-203ENST00000426886 TAF1LQ8IZX4 1826 aa16.34■□□□□ 0.21
SMIM12-203ENST00000426886 SSFA2P28290 1259 aa16.34■□□□□ 0.21
SMIM12-203ENST00000426886 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
SMIM12-203ENST00000426886 TEX13AQ9BXU3 409 aaPredicted RBP16.34■□□□□ 0.21
SMIM12-203ENST00000426886 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.21
SMIM12-203ENST00000426886 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.21
SMIM12-203ENST00000426886 RFC4P35249 363 aa16.33■□□□□ 0.21
SMIM12-203ENST00000426886 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.21
SMIM12-203ENST00000426886 MTFR1LQ9H019 292 aa16.33■□□□□ 0.21
SMIM12-203ENST00000426886 MBIPQ9NS73 344 aa16.33■□□□□ 0.21
SMIM12-203ENST00000426886 UTRNP46939 3433 aa16.33■□□□□ 0.2
SMIM12-203ENST00000426886 ELL2O00472 640 aaPredicted RBP16.33■□□□□ 0.2
SMIM12-203ENST00000426886 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
SMIM12-203ENST00000426886 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
SMIM12-203ENST00000426886 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
SMIM12-203ENST00000426886 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
SMIM12-203ENST00000426886 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
SMIM12-203ENST00000426886 GNAI1P63096 354 aa16.31■□□□□ 0.2
SMIM12-203ENST00000426886 CCDC27Q2M243 656 aa16.31■□□□□ 0.2
SMIM12-203ENST00000426886 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
SMIM12-203ENST00000426886 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
SMIM12-203ENST00000426886 TJP1Q07157 1748 aa16.31■□□□□ 0.2
SMIM12-203ENST00000426886 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
SMIM12-203ENST00000426886 SLC16A10Q8TF71 515 aa16.3■□□□□ 0.2
SMIM12-203ENST00000426886 BABAM1Q9NWV8 329 aa16.3■□□□□ 0.2
SMIM12-203ENST00000426886 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
SMIM12-203ENST00000426886 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
SMIM12-203ENST00000426886 TBC1D2BQ9UPU7 963 aa16.3■□□□□ 0.2
SMIM12-203ENST00000426886 MYL6BP14649 208 aa16.29■□□□□ 0.2
SMIM12-203ENST00000426886 PTGER2P43116 358 aa16.29■□□□□ 0.2
SMIM12-203ENST00000426886 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
SMIM12-203ENST00000426886 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
SMIM12-203ENST00000426886 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
SMIM12-203ENST00000426886 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
SMIM12-203ENST00000426886 ZPR1O75312 459 aa16.28■□□□□ 0.2
SMIM12-203ENST00000426886 ADRA2BP18089 450 aa16.28■□□□□ 0.2
SMIM12-203ENST00000426886 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
SMIM12-203ENST00000426886 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
SMIM12-203ENST00000426886 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
SMIM12-203ENST00000426886 ANXA1P04083 346 aa16.28■□□□□ 0.2
SMIM12-203ENST00000426886 EIF5P55010 431 aaKnown RBP16.28■□□□□ 0.2
SMIM12-203ENST00000426886 USPL1Q5W0Q7 1092 aa16.28■□□□□ 0.2
SMIM12-203ENST00000426886 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.2
SMIM12-203ENST00000426886 UBR3Q6ZT12 1888 aa16.27■□□□□ 0.2
SMIM12-203ENST00000426886 COL15A1P39059 1388 aa16.27■□□□□ 0.19
SMIM12-203ENST00000426886 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.19
SMIM12-203ENST00000426886 POLD1P28340 1107 aa16.27■□□□□ 0.19
SMIM12-203ENST00000426886 DUSP27Q5VZP5 1158 aa16.27■□□□□ 0.19
SMIM12-203ENST00000426886 C8orf58Q8NAV2 365 aa16.27■□□□□ 0.19
SMIM12-203ENST00000426886 ZNF831Q5JPB2 1677 aa16.26■□□□□ 0.19
SMIM12-203ENST00000426886 CASZ1Q86V15 1759 aa16.26■□□□□ 0.19
SMIM12-203ENST00000426886 GYS1P13807 737 aa16.26■□□□□ 0.19
SMIM12-203ENST00000426886 IL6STP40189 918 aaPredicted RBP16.26■□□□□ 0.19
SMIM12-203ENST00000426886 FKBP8Q14318 412 aa16.26■□□□□ 0.19
SMIM12-203ENST00000426886 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
SMIM12-203ENST00000426886 WDR63Q8IWG1 891 aa16.25■□□□□ 0.19
SMIM12-203ENST00000426886 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
SMIM12-203ENST00000426886 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
SMIM12-203ENST00000426886 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
SMIM12-203ENST00000426886 PROSER3Q2NL68 480 aa16.24■□□□□ 0.19
SMIM12-203ENST00000426886 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
SMIM12-203ENST00000426886 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
SMIM12-203ENST00000426886 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
SMIM12-203ENST00000426886 TCERG1O14776 1098 aaKnown RBP16.24■□□□□ 0.19
SMIM12-203ENST00000426886 MMP10P09238 476 aa16.24■□□□□ 0.19
SMIM12-203ENST00000426886 NARFQ9UHQ1 456 aa16.24■□□□□ 0.19
SMIM12-203ENST00000426886 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
SMIM12-203ENST00000426886 NLGN1Q8N2Q7 840 aa16.23■□□□□ 0.19
SMIM12-203ENST00000426886 AIMP1Q12904 312 aaKnown RBP16.23■□□□□ 0.19
SMIM12-203ENST00000426886 FANCIQ9NVI1 1328 aa16.22■□□□□ 0.19
SMIM12-203ENST00000426886 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMIM12-203ENST00000426886 CHPF2Q9P2E5 772 aa16.22■□□□□ 0.19
SMIM12-203ENST00000426886 IL16Q14005 1332 aa16.22■□□□□ 0.19
SMIM12-203ENST00000426886 A0A087WZG4 1122 aa16.22■□□□□ 0.19
SMIM12-203ENST00000426886 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
SMIM12-203ENST00000426886 BCL2L12Q9HB09 334 aa16.22■□□□□ 0.19
SMIM12-203ENST00000426886 PDIA6Q15084 440 aa16.21■□□□□ 0.19
SMIM12-203ENST00000426886 TTLL7Q6ZT98 887 aa16.21■□□□□ 0.19
SMIM12-203ENST00000426886 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
SMIM12-203ENST00000426886 FHDC1Q9C0D6 1143 aaPredicted RBP16.21■□□□□ 0.19
SMIM12-203ENST00000426886 CICQ96RK0 1608 aaPredicted RBP16.2■□□□□ 0.18
SMIM12-203ENST00000426886 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
SMIM12-203ENST00000426886 ZNF521Q96K83 1311 aa16.2■□□□□ 0.18
SMIM12-203ENST00000426886 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
SMIM12-203ENST00000426886 QSER1Q2KHR3 1735 aa16.2■□□□□ 0.18
SMIM12-203ENST00000426886 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
SMIM12-203ENST00000426886 TWISTNBQ3B726 338 aaPredicted RBP16.19■□□□□ 0.18
SMIM12-203ENST00000426886 MYH16Q9H6N6 1097 aa16.19■□□□□ 0.18
SMIM12-203ENST00000426886 HLFQ16534 295 aa16.19■□□□□ 0.18
SMIM12-203ENST00000426886 NFIXQ14938 502 aa16.18■□□□□ 0.18
SMIM12-203ENST00000426886 TBC1D9BQ66K14 1250 aa16.18■□□□□ 0.18
SMIM12-203ENST00000426886 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
SMIM12-203ENST00000426886 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
SMIM12-203ENST00000426886 XAGE3Q8WTP9 111 aa16.18■□□□□ 0.18
SMIM12-203ENST00000426886 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms