RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 TOMM70O94826 608 aa17.37■□□□□ 0.37
NELFE-203ENST00000426722 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
NELFE-203ENST00000426722 AFDNP55196 1824 aaKnown RBP17.37■□□□□ 0.37
NELFE-203ENST00000426722 COL15A1P39059 1388 aa17.37■□□□□ 0.37
NELFE-203ENST00000426722 NRXN2Q9P2S2 1712 aa17.36■□□□□ 0.37
NELFE-203ENST00000426722 TTC5Q8N0Z6 440 aa17.36■□□□□ 0.37
NELFE-203ENST00000426722 TEX13AQ9BXU3 409 aaPredicted RBP17.36■□□□□ 0.37
NELFE-203ENST00000426722 A0A087WZG4 1122 aa17.35■□□□□ 0.37
NELFE-203ENST00000426722 STARD3NLO95772 234 aa17.35■□□□□ 0.37
NELFE-203ENST00000426722 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
NELFE-203ENST00000426722 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
NELFE-203ENST00000426722 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
NELFE-203ENST00000426722 SBF1O95248 1867 aa17.34■□□□□ 0.37
NELFE-203ENST00000426722 TEFQ10587 303 aa17.34■□□□□ 0.37
NELFE-203ENST00000426722 NFIXQ14938 502 aa17.34■□□□□ 0.37
NELFE-203ENST00000426722 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
NELFE-203ENST00000426722 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
NELFE-203ENST00000426722 CHRNA5P30532 468 aa17.33■□□□□ 0.36
NELFE-203ENST00000426722 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
NELFE-203ENST00000426722 SERPINB2P05120 415 aa17.32■□□□□ 0.36
NELFE-203ENST00000426722 APLP1P51693 650 aa17.32■□□□□ 0.36
NELFE-203ENST00000426722 BCL2L12Q9HB09 334 aa17.32■□□□□ 0.36
NELFE-203ENST00000426722 DLEC1Q9Y238 1755 aa17.32■□□□□ 0.36
NELFE-203ENST00000426722 HEG1Q9ULI3 1381 aa17.31■□□□□ 0.36
NELFE-203ENST00000426722 KDM2BQ8NHM5 1336 aa17.31■□□□□ 0.36
NELFE-203ENST00000426722 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
NELFE-203ENST00000426722 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
NELFE-203ENST00000426722 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
NELFE-203ENST00000426722 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
NELFE-203ENST00000426722 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
NELFE-203ENST00000426722 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
NELFE-203ENST00000426722 ZC3H4Q9UPT8 1303 aaKnown RBP17.3■□□□□ 0.36
NELFE-203ENST00000426722 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
NELFE-203ENST00000426722 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
NELFE-203ENST00000426722 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
NELFE-203ENST00000426722 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
NELFE-203ENST00000426722 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
NELFE-203ENST00000426722 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
NELFE-203ENST00000426722 IL6STP40189 918 aaPredicted RBP17.28■□□□□ 0.36
NELFE-203ENST00000426722 TTLL6Q8N841 843 aa17.28■□□□□ 0.36
NELFE-203ENST00000426722 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
NELFE-203ENST00000426722 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
NELFE-203ENST00000426722 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
NELFE-203ENST00000426722 H0YIN7 160 aa17.27■□□□□ 0.36
NELFE-203ENST00000426722 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
NELFE-203ENST00000426722 FSTL1Q12841 308 aa17.26■□□□□ 0.35
NELFE-203ENST00000426722 IFFO2Q5TF58 517 aa17.26■□□□□ 0.35
NELFE-203ENST00000426722 C2CD5Q86YS7 1000 aa17.26■□□□□ 0.35
NELFE-203ENST00000426722 CCDC88AQ3V6T2 1871 aa17.25■□□□□ 0.35
NELFE-203ENST00000426722 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
NELFE-203ENST00000426722 LMNB1P20700 586 aa17.25■□□□□ 0.35
NELFE-203ENST00000426722 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
NELFE-203ENST00000426722 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
NELFE-203ENST00000426722 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
NELFE-203ENST00000426722 SCN7AQ01118 1682 aa17.25■□□□□ 0.35
NELFE-203ENST00000426722 PDE6BP35913 854 aa17.24■□□□□ 0.35
NELFE-203ENST00000426722 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
NELFE-203ENST00000426722 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
NELFE-203ENST00000426722 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
NELFE-203ENST00000426722 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
NELFE-203ENST00000426722 RRAGCQ9HB90 399 aa17.23■□□□□ 0.35
NELFE-203ENST00000426722 CARMIL3Q8ND23 1372 aa17.23■□□□□ 0.35
NELFE-203ENST00000426722 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
NELFE-203ENST00000426722 WDR90Q96KV7 1748 aa17.22■□□□□ 0.35
NELFE-203ENST00000426722 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
NELFE-203ENST00000426722 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
NELFE-203ENST00000426722 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
NELFE-203ENST00000426722 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
NELFE-203ENST00000426722 A1BGP04217 495 aa17.21■□□□□ 0.35
NELFE-203ENST00000426722 RASSF7Q02833 373 aa17.21■□□□□ 0.35
NELFE-203ENST00000426722 DNAJC5GQ8N7S2 189 aa17.21■□□□□ 0.35
NELFE-203ENST00000426722 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
NELFE-203ENST00000426722 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
NELFE-203ENST00000426722 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
NELFE-203ENST00000426722 DICER1Q9UPY3 1922 aaKnown RBP17.2■□□□□ 0.34
NELFE-203ENST00000426722 PPP2R1AP30153 589 aa17.2■□□□□ 0.34
NELFE-203ENST00000426722 PRR5LQ6MZQ0 368 aa17.2■□□□□ 0.34
NELFE-203ENST00000426722 RGL2O15211 777 aa17.19■□□□□ 0.34
NELFE-203ENST00000426722 CAMTA2O94983 1202 aa17.19■□□□□ 0.34
NELFE-203ENST00000426722 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
NELFE-203ENST00000426722 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
NELFE-203ENST00000426722 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.34
NELFE-203ENST00000426722 CLEC4GQ6UXB4 293 aa17.19■□□□□ 0.34
NELFE-203ENST00000426722 SMC1BQ8NDV3 1235 aa17.19■□□□□ 0.34
NELFE-203ENST00000426722 ZNF622Q969S3 477 aaKnown RBP eCLIP17.19■□□□□ 0.347e-7■□□□□ 9.6
NELFE-203ENST00000426722 FER1L6Q2WGJ9 1857 aa17.18■□□□□ 0.34
NELFE-203ENST00000426722 KCNQ3O43525 872 aa17.18■□□□□ 0.34
NELFE-203ENST00000426722 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
NELFE-203ENST00000426722 ST5P78524 1137 aa17.18■□□□□ 0.34
NELFE-203ENST00000426722 DZIP3Q86Y13 1208 aaKnown RBP17.18■□□□□ 0.34
NELFE-203ENST00000426722 CNKSR1Q969H4 720 aa17.18■□□□□ 0.34
NELFE-203ENST00000426722 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
NELFE-203ENST00000426722 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
NELFE-203ENST00000426722 NFKBIEO00221 500 aa17.17■□□□□ 0.34
NELFE-203ENST00000426722 NPHP1O15259 732 aa17.17■□□□□ 0.34
NELFE-203ENST00000426722 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
NELFE-203ENST00000426722 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
NELFE-203ENST00000426722 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
NELFE-203ENST00000426722 ARFGEF2Q9Y6D5 1785 aa17.16■□□□□ 0.34
NELFE-203ENST00000426722 PRELPP51888 382 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms