RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 COL15A1P39059 1388 aa19.19■□□□□ 0.66
NCKIPSD-205ENST00000426678 KCNQ3O43525 872 aa19.19■□□□□ 0.66
NCKIPSD-205ENST00000426678 TAF7Q15545 349 aaPredicted RBP19.19■□□□□ 0.66
NCKIPSD-205ENST00000426678 ZPR1O75312 459 aa19.18■□□□□ 0.66
NCKIPSD-205ENST00000426678 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
NCKIPSD-205ENST00000426678 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
NCKIPSD-205ENST00000426678 SRP68Q9UHB9 627 aaKnown RBP19.18■□□□□ 0.66
NCKIPSD-205ENST00000426678 GPR162Q16538 588 aa19.17■□□□□ 0.66
NCKIPSD-205ENST00000426678 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
NCKIPSD-205ENST00000426678 RIPK4P57078 832 aa19.16■□□□□ 0.66
NCKIPSD-205ENST00000426678 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
NCKIPSD-205ENST00000426678 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
NCKIPSD-205ENST00000426678 THUMPD2Q9BTF0 503 aaKnown RBP19.16■□□□□ 0.66
NCKIPSD-205ENST00000426678 KDM3BQ7LBC6 1761 aa19.15■□□□□ 0.66
NCKIPSD-205ENST00000426678 SNRPA1P09661 255 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-205ENST00000426678 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-205ENST00000426678 RUNDC1Q96C34 613 aa19.15■□□□□ 0.66
NCKIPSD-205ENST00000426678 PARP3Q9Y6F1 533 aa19.15■□□□□ 0.66
NCKIPSD-205ENST00000426678 A0A087WZG4 1122 aa19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 TMPOP42166 694 aaKnown RBP19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 FKBP8Q14318 412 aa19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 MIS18AQ9NYP9 233 aa19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 NARFQ9UHQ1 456 aa19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 ADAMTS8Q9UP79 889 aa19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 ZNF330Q9Y3S2 320 aaPredicted RBP19.14■□□□□ 0.65
NCKIPSD-205ENST00000426678 LAMB4A4D0S4 1761 aa19.12■□□□□ 0.65
NCKIPSD-205ENST00000426678 IL6STP40189 918 aaPredicted RBP19.12■□□□□ 0.65
NCKIPSD-205ENST00000426678 EIF5P55010 431 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-205ENST00000426678 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-205ENST00000426678 KIF13BQ9NQT8 1826 aa19.11■□□□□ 0.65
NCKIPSD-205ENST00000426678 C10orf71Q711Q0 1435 aa19.11■□□□□ 0.65
NCKIPSD-205ENST00000426678 A1BGP04217 495 aa19.11■□□□□ 0.65
NCKIPSD-205ENST00000426678 YY1P25490 414 aa19.11■□□□□ 0.65
NCKIPSD-205ENST00000426678 NEUROD2Q15784 382 aa19.11■□□□□ 0.65
NCKIPSD-205ENST00000426678 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
NCKIPSD-205ENST00000426678 SCN7AQ01118 1682 aa19.11■□□□□ 0.65
NCKIPSD-205ENST00000426678 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
NCKIPSD-205ENST00000426678 ANP32CO43423 234 aa19.1■□□□□ 0.65
NCKIPSD-205ENST00000426678 DDR1Q08345 913 aa19.09■□□□□ 0.65
NCKIPSD-205ENST00000426678 TSPYL4Q9UJ04 414 aa19.09■□□□□ 0.65
NCKIPSD-205ENST00000426678 CHD4Q14839 1912 aa19.09■□□□□ 0.65
NCKIPSD-205ENST00000426678 POLRMTO00411 1230 aaKnown RBP19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 GRIN3BO60391 1043 aa19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 YBX3P16989 372 aaKnown RBP eCLIP19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 TM4SF1P30408 202 aa19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 EIF4A1P60842 406 aaKnown RBP19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 NFIXQ14938 502 aa19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 TBC1D2BQ9UPU7 963 aa19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 PXDNLA1KZ92 1463 aa19.07■□□□□ 0.64
NCKIPSD-205ENST00000426678 KIAA1551Q9HCM1 1747 aa19.06■□□□□ 0.64
NCKIPSD-205ENST00000426678 TGFB2P61812 414 aa19.06■□□□□ 0.64
NCKIPSD-205ENST00000426678 BCL2L12Q9HB09 334 aa19.06■□□□□ 0.64
NCKIPSD-205ENST00000426678 BABAM1Q9NWV8 329 aa19.06■□□□□ 0.64
NCKIPSD-205ENST00000426678 BCORQ6W2J9 1755 aa19.06■□□□□ 0.64
NCKIPSD-205ENST00000426678 N4BP2Q86UW6 1770 aaPredicted RBP19.06■□□□□ 0.64
NCKIPSD-205ENST00000426678 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-205ENST00000426678 DZIP3Q86Y13 1208 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-205ENST00000426678 WWC3Q9ULE0 1092 aa19.05■□□□□ 0.64
NCKIPSD-205ENST00000426678 AFDNP55196 1824 aaKnown RBP19.04■□□□□ 0.64
NCKIPSD-205ENST00000426678 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
NCKIPSD-205ENST00000426678 TRIM35Q9UPQ4 493 aa19.04■□□□□ 0.64
NCKIPSD-205ENST00000426678 CCDC184Q52MB2 194 aa19.03■□□□□ 0.64
NCKIPSD-205ENST00000426678 MRS2Q9HD23 443 aa19.03■□□□□ 0.64
NCKIPSD-205ENST00000426678 NRXN2Q9P2S2 1712 aa19.03■□□□□ 0.64
NCKIPSD-205ENST00000426678 NBPF26B4DH59 902 aa19.02■□□□□ 0.64
NCKIPSD-205ENST00000426678 APAF1O14727 1248 aa19.02■□□□□ 0.64
NCKIPSD-205ENST00000426678 CAMTA2O94983 1202 aa19.02■□□□□ 0.64
NCKIPSD-205ENST00000426678 SERPINB2P05120 415 aa19.02■□□□□ 0.64
NCKIPSD-205ENST00000426678 NBPF10Q6P3W6 841 aaKnown RBP19.02■□□□□ 0.64
NCKIPSD-205ENST00000426678 NBPF15Q8N660 670 aa19.02■□□□□ 0.64
NCKIPSD-205ENST00000426678 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
NCKIPSD-205ENST00000426678 DPEP1P16444 411 aa19.01■□□□□ 0.63
NCKIPSD-205ENST00000426678 TBC1D9BQ66K14 1250 aa19.01■□□□□ 0.63
NCKIPSD-205ENST00000426678 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
NCKIPSD-205ENST00000426678 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
NCKIPSD-205ENST00000426678 CARMIL3Q8ND23 1372 aa19■□□□□ 0.63
NCKIPSD-205ENST00000426678 BRCA1P38398 1863 aaKnown RBP18.99■□□□□ 0.63
NCKIPSD-205ENST00000426678 ERBB4Q15303 1308 aa18.99■□□□□ 0.63
NCKIPSD-205ENST00000426678 CHL1O00533 1208 aa18.98■□□□□ 0.63
NCKIPSD-205ENST00000426678 NPHP1O15259 732 aa18.98■□□□□ 0.63
NCKIPSD-205ENST00000426678 SETDB2Q96T68 719 aa18.98■□□□□ 0.63
NCKIPSD-205ENST00000426678 BCS1LQ9Y276 419 aa18.98■□□□□ 0.63
NCKIPSD-205ENST00000426678 MYL6BP14649 208 aa18.97■□□□□ 0.63
NCKIPSD-205ENST00000426678 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
NCKIPSD-205ENST00000426678 CLEC4GQ6UXB4 293 aa18.97■□□□□ 0.63
NCKIPSD-205ENST00000426678 NGEFQ8N5V2 710 aa18.97■□□□□ 0.63
NCKIPSD-205ENST00000426678 GOLGB1Q14789 3259 aaKnown RBP18.96■□□□□ 0.63
NCKIPSD-205ENST00000426678 RGL2O15211 777 aa18.96■□□□□ 0.63
NCKIPSD-205ENST00000426678 EIF2S2P20042 333 aaKnown RBP18.96■□□□□ 0.63
NCKIPSD-205ENST00000426678 CHRNA5P30532 468 aa18.96■□□□□ 0.63
NCKIPSD-205ENST00000426678 KIF6Q6ZMV9 814 aa18.96■□□□□ 0.63
NCKIPSD-205ENST00000426678 PIM2Q9P1W9 311 aa18.96■□□□□ 0.63
NCKIPSD-205ENST00000426678 CFAP44Q96MT7 982 aa18.95■□□□□ 0.62
NCKIPSD-205ENST00000426678 UTRNP46939 3433 aa18.94■□□□□ 0.62
NCKIPSD-205ENST00000426678 KCNA3P22001 575 aa18.94■□□□□ 0.62
NCKIPSD-205ENST00000426678 CNBD1Q8NA66 436 aa18.94■□□□□ 0.62
NCKIPSD-205ENST00000426678 ARFGEF1Q9Y6D6 1849 aa18.93■□□□□ 0.62
NCKIPSD-205ENST00000426678 GNAI1P63096 354 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms