RNA–Protein interactions for RNA: ENST00000424898.2

PDZD9-201, Transcript of PDZ domain containing 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZD9, Length 1,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD9-201ENST00000424898 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
PDZD9-201ENST00000424898 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
PDZD9-201ENST00000424898 ITGB4P16144 1822 aa16.22■□□□□ 0.19
PDZD9-201ENST00000424898 NEFMP07197 916 aa16.21■□□□□ 0.19
PDZD9-201ENST00000424898 KCNA3P22001 575 aa16.21■□□□□ 0.19
PDZD9-201ENST00000424898 RFC4P35249 363 aa16.21■□□□□ 0.19
PDZD9-201ENST00000424898 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
PDZD9-201ENST00000424898 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
PDZD9-201ENST00000424898 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
PDZD9-201ENST00000424898 ARHGEF1Q92888 912 aaKnown RBP16.2■□□□□ 0.18
PDZD9-201ENST00000424898 VEGFAP15692 232 aaPredicted RBP16.19■□□□□ 0.18
PDZD9-201ENST00000424898 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
PDZD9-201ENST00000424898 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
PDZD9-201ENST00000424898 MRS2Q9HD23 443 aa16.19■□□□□ 0.18
PDZD9-201ENST00000424898 GYS1P13807 737 aa16.18■□□□□ 0.18
PDZD9-201ENST00000424898 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
PDZD9-201ENST00000424898 PKD1L3Q7Z443 1732 aa16.18■□□□□ 0.18
PDZD9-201ENST00000424898 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
PDZD9-201ENST00000424898 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
PDZD9-201ENST00000424898 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
PDZD9-201ENST00000424898 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
PDZD9-201ENST00000424898 TNRC6CQ9HCJ0 1690 aaKnown RBP16.17■□□□□ 0.18
PDZD9-201ENST00000424898 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
PDZD9-201ENST00000424898 PHKG2P15735 406 aa16.16■□□□□ 0.18
PDZD9-201ENST00000424898 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
PDZD9-201ENST00000424898 ARFGEF1Q9Y6D6 1849 aa16.15■□□□□ 0.18
PDZD9-201ENST00000424898 CHRNA5P30532 468 aa16.15■□□□□ 0.18
PDZD9-201ENST00000424898 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
PDZD9-201ENST00000424898 AKAP4Q5JQC9 854 aa16.15■□□□□ 0.18
PDZD9-201ENST00000424898 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
PDZD9-201ENST00000424898 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
PDZD9-201ENST00000424898 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
PDZD9-201ENST00000424898 RPS6KA4O75676 772 aa16.14■□□□□ 0.17
PDZD9-201ENST00000424898 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
PDZD9-201ENST00000424898 ADAMTS8Q9UP79 889 aa16.14■□□□□ 0.17
PDZD9-201ENST00000424898 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
PDZD9-201ENST00000424898 RASSF7Q02833 373 aa16.13■□□□□ 0.17
PDZD9-201ENST00000424898 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
PDZD9-201ENST00000424898 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
PDZD9-201ENST00000424898 MKRN1Q9UHC7 482 aaKnown RBP16.13■□□□□ 0.17
PDZD9-201ENST00000424898 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
PDZD9-201ENST00000424898 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
PDZD9-201ENST00000424898 PLEKHF1Q96S99 279 aa16.12■□□□□ 0.17
PDZD9-201ENST00000424898 LMNB1P20700 586 aa16.11■□□□□ 0.17
PDZD9-201ENST00000424898 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
PDZD9-201ENST00000424898 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
PDZD9-201ENST00000424898 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
PDZD9-201ENST00000424898 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
PDZD9-201ENST00000424898 FOXN1O15353 648 aa16.1■□□□□ 0.17
PDZD9-201ENST00000424898 DDR1Q08345 913 aa16.1■□□□□ 0.17
PDZD9-201ENST00000424898 FKBP8Q14318 412 aa16.1■□□□□ 0.17
PDZD9-201ENST00000424898 RUNDC1Q96C34 613 aa16.1■□□□□ 0.17
PDZD9-201ENST00000424898 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
PDZD9-201ENST00000424898 SBF1O95248 1867 aa16.1■□□□□ 0.17
PDZD9-201ENST00000424898 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
PDZD9-201ENST00000424898 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
PDZD9-201ENST00000424898 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
PDZD9-201ENST00000424898 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
PDZD9-201ENST00000424898 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
PDZD9-201ENST00000424898 AIDAQ96BJ3 306 aa16.08■□□□□ 0.16
PDZD9-201ENST00000424898 CREBZFQ9NS37 354 aa16.08■□□□□ 0.16
PDZD9-201ENST00000424898 CABP4P57796 275 aa16.07■□□□□ 0.16
PDZD9-201ENST00000424898 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
PDZD9-201ENST00000424898 FAM161AQ3B820 660 aa16.07■□□□□ 0.16
PDZD9-201ENST00000424898 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
PDZD9-201ENST00000424898 MIER1Q8N108 512 aa16.07■□□□□ 0.16
PDZD9-201ENST00000424898 RNMTO43148 476 aaKnown RBP16.06■□□□□ 0.16
PDZD9-201ENST00000424898 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
PDZD9-201ENST00000424898 FAM9BQ8IZU0 186 aa16.06■□□□□ 0.16
PDZD9-201ENST00000424898 KDM6AO15550 1401 aaPredicted RBP16.05■□□□□ 0.16
PDZD9-201ENST00000424898 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
PDZD9-201ENST00000424898 RIPK4P57078 832 aa16.05■□□□□ 0.16
PDZD9-201ENST00000424898 LGR6Q9HBX8 967 aa16.05■□□□□ 0.16
PDZD9-201ENST00000424898 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
PDZD9-201ENST00000424898 POTECB2RU33 542 aa16.04■□□□□ 0.16
PDZD9-201ENST00000424898 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
PDZD9-201ENST00000424898 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
PDZD9-201ENST00000424898 TMPOP42166 694 aaKnown RBP16.04■□□□□ 0.16
PDZD9-201ENST00000424898 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
PDZD9-201ENST00000424898 LMOD3Q0VAK6 560 aa16.04■□□□□ 0.16
PDZD9-201ENST00000424898 CHADLQ6NUI6 762 aa16.04■□□□□ 0.16
PDZD9-201ENST00000424898 TEFQ10587 303 aa16.03■□□□□ 0.16
PDZD9-201ENST00000424898 TTLL6Q8N841 843 aa16.03■□□□□ 0.16
PDZD9-201ENST00000424898 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
PDZD9-201ENST00000424898 IL17REQ8NFR9 667 aa16.03■□□□□ 0.16
PDZD9-201ENST00000424898 SLC52A2Q9HAB3 445 aa16.03■□□□□ 0.16
PDZD9-201ENST00000424898 ZPR1O75312 459 aa16.02■□□□□ 0.16
PDZD9-201ENST00000424898 TM4SF1P30408 202 aa16.02■□□□□ 0.16
PDZD9-201ENST00000424898 LBX1P52954 281 aa16.02■□□□□ 0.16
PDZD9-201ENST00000424898 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
PDZD9-201ENST00000424898 APAF1O14727 1248 aa16.01■□□□□ 0.15
PDZD9-201ENST00000424898 ABHD8Q96I13 439 aa16.01■□□□□ 0.15
PDZD9-201ENST00000424898 CNTNAP1P78357 1384 aa16■□□□□ 0.15
PDZD9-201ENST00000424898 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
PDZD9-201ENST00000424898 COL5A3P25940 1745 aaPredicted RBP16■□□□□ 0.15
PDZD9-201ENST00000424898 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
PDZD9-201ENST00000424898 MCM10Q7L590 875 aa16■□□□□ 0.15
PDZD9-201ENST00000424898 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
PDZD9-201ENST00000424898 MYH14Q7Z406 1995 aaKnown RBP16■□□□□ 0.15
PDZD9-201ENST00000424898 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms