RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 QRICH2Q9H0J4 1663 aa13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 RBM6P78332 1123 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 CUL4AQ13619 759 aa13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 FYB1O15117 783 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 CACTINQ8WUQ7 758 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 TULP2O00295 520 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 POLR3GO15318 223 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 UBE2HP62256 183 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 SYCP1Q15431 976 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 ESYT1Q9BSJ8 1104 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
SEC61A1-202ENST00000424880 CCDC66A2RUB6 948 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 LARGE1O95461 756 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 HNRNPH2P55795 449 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 FUCA2Q9BTY2 467 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 MORC2Q9Y6X9 1032 aaPredicted RBP13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 STX6O43752 255 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 ANKRD44Q8N8A2 993 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 LRRN4CLQ8ND94 238 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 SMTNL1A8MU46 457 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 GOLGA6L6A8MZA4 724 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 ZSCAN25Q6NSZ9 544 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 NEK11Q8NG66 645 aa13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 ARHGEF28Q8N1W1 1705 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 RPAP1Q9BWH6 1393 aaPredicted RBP13.47□□□□□ -0.25
SEC61A1-202ENST00000424880 SPATA31D1Q6ZQQ2 1576 aa13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 LIG1P18858 919 aa13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 CEP135Q66GS9 1140 aa13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 IL1RAPL2Q9NP60 686 aa13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.25
SEC61A1-202ENST00000424880 MED14O60244 1454 aa13.46□□□□□ -0.26
SEC61A1-202ENST00000424880 TEX2Q8IWB9 1127 aa13.46□□□□□ -0.26
SEC61A1-202ENST00000424880 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 IL16Q14005 1332 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 GORABQ5T7V8 394 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 CCDC192P0DO97 292 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 NECAB1Q8N987 351 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 ZNF446Q9NWS9 450 aa13.45□□□□□ -0.26
SEC61A1-202ENST00000424880 MSH6P52701 1360 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 MCCP23508 829 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 AK2P54819 239 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 F13A1P00488 732 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 FAM193AP78312 1265 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 ERCC6LQ2NKX8 1250 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 DNAJC25Q9H1X3 360 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 ZCCHC17Q9NP64 241 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 MRVI1Q9Y6F6 885 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 SETD1BQ9UPS6 1966 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
SEC61A1-202ENST00000424880 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 PRAM1Q96QH2 718 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 SPG7Q9UQ90 795 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 SMC3Q9UQE7 1217 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 CHMLP26374 656 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 TYRO3Q06418 890 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 ERCC4Q92889 916 aaPredicted RBP13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 INTS4Q96HW7 963 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 ALKQ9UM73 1620 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
SEC61A1-202ENST00000424880 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 GJB2P29033 226 aa13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 TNNT3P45378 269 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 GYS2P54840 703 aa13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 NOL10Q9BSC4 688 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 DACT1Q9NYF0 836 aa13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
SEC61A1-202ENST00000424880 TRIM66O15016 1216 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 GNAI1P63096 354 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 FAM200AQ8TCP9 573 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 EPC1Q9H2F5 836 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 MCM2P49736 904 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 MCM10Q7L590 875 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 RIMS2Q9UQ26 1411 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms