RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 CANXP27824 592 aaKnown RBP28.18■■■□□ 2.1
SMIM12-202ENST00000423898 DDR1Q08345 913 aa28.18■■■□□ 2.1
SMIM12-202ENST00000423898 HEG1Q9ULI3 1381 aa28.17■■■□□ 2.1
SMIM12-202ENST00000423898 FCHSD2O94868 740 aa28.17■■■□□ 2.1
SMIM12-202ENST00000423898 STARD3NLO95772 234 aa28.17■■■□□ 2.1
SMIM12-202ENST00000423898 BRCA1P38398 1863 aaKnown RBP28.17■■■□□ 2.1
SMIM12-202ENST00000423898 DPEP1P16444 411 aa28.16■■■□□ 2.1
SMIM12-202ENST00000423898 BCS1LQ9Y276 419 aa28.16■■■□□ 2.1
SMIM12-202ENST00000423898 RTF1Q92541 710 aaKnown RBP28.15■■■□□ 2.1
SMIM12-202ENST00000423898 NARFQ9UHQ1 456 aa28.15■■■□□ 2.1
SMIM12-202ENST00000423898 ATP10DQ9P241 1426 aa28.15■■■□□ 2.1
SMIM12-202ENST00000423898 BTBD11A6QL63 1104 aa28.14■■■□□ 2.1
SMIM12-202ENST00000423898 POLRMTO00411 1230 aaKnown RBP28.14■■■□□ 2.1
SMIM12-202ENST00000423898 FMNL2Q96PY5 1086 aa28.14■■■□□ 2.1
SMIM12-202ENST00000423898 GIGYF1O75420 1035 aaPredicted RBP28.13■■■□□ 2.09
SMIM12-202ENST00000423898 MCM10Q7L590 875 aa28.13■■■□□ 2.09
SMIM12-202ENST00000423898 AFDNP55196 1824 aaKnown RBP28.13■■■□□ 2.09
SMIM12-202ENST00000423898 TM4SF1P30408 202 aa28.12■■■□□ 2.09
SMIM12-202ENST00000423898 TEX13AQ9BXU3 409 aaPredicted RBP28.12■■■□□ 2.09
SMIM12-202ENST00000423898 KCNQ3O43525 872 aa28.11■■■□□ 2.09
SMIM12-202ENST00000423898 ZNF330Q9Y3S2 320 aaPredicted RBP28.11■■■□□ 2.09
SMIM12-202ENST00000423898 NFIXQ14938 502 aa28.1■■■□□ 2.09
SMIM12-202ENST00000423898 ADCY9O60503 1353 aa28.1■■■□□ 2.09
SMIM12-202ENST00000423898 EIF5P55010 431 aaKnown RBP28.09■■■□□ 2.09
SMIM12-202ENST00000423898 C1QTNF8P60827 252 aa28.09■■■□□ 2.09
SMIM12-202ENST00000423898 DCTN1Q14203 1278 aa28.09■■■□□ 2.09
SMIM12-202ENST00000423898 ARFGEF1Q9Y6D6 1849 aa28.08■■■□□ 2.09
SMIM12-202ENST00000423898 DLG5Q8TDM6 1919 aa28.08■■■□□ 2.09
SMIM12-202ENST00000423898 NEFMP07197 916 aa28.08■■■□□ 2.09
SMIM12-202ENST00000423898 BCL2L12Q9HB09 334 aa28.08■■■□□ 2.09
SMIM12-202ENST00000423898 SCN7AQ01118 1682 aa28.07■■■□□ 2.08
SMIM12-202ENST00000423898 A0A087WZG4 1122 aa28.07■■■□□ 2.08
SMIM12-202ENST00000423898 KCNA3P22001 575 aa28.07■■■□□ 2.08
SMIM12-202ENST00000423898 ZNF526Q8TF50 670 aaPredicted RBP28.07■■■□□ 2.08
SMIM12-202ENST00000423898 NRXN2Q9P2S2 1712 aa28.06■■■□□ 2.08
SMIM12-202ENST00000423898 PIM2Q9P1W9 311 aa28.06■■■□□ 2.08
SMIM12-202ENST00000423898 A1BGP04217 495 aa28.05■■■□□ 2.08
SMIM12-202ENST00000423898 CHRNA5P30532 468 aa28.05■■■□□ 2.08
SMIM12-202ENST00000423898 ARHGAP27Q6ZUM4 889 aa28.05■■■□□ 2.08
SMIM12-202ENST00000423898 GPBP1L1Q9HC44 474 aaPredicted RBP28.05■■■□□ 2.08
SMIM12-202ENST00000423898 HTATSF1O43719 755 aaKnown RBP28.04■■■□□ 2.08
SMIM12-202ENST00000423898 BICDL1Q6ZP65 573 aa28.04■■■□□ 2.08
SMIM12-202ENST00000423898 NPM2Q86SE8 214 aaKnown RBP28.04■■■□□ 2.08
SMIM12-202ENST00000423898 SERPINB2P05120 415 aa28.03■■■□□ 2.08
SMIM12-202ENST00000423898 IL6STP40189 918 aaPredicted RBP28.03■■■□□ 2.08
SMIM12-202ENST00000423898 DALRD3Q5D0E6 543 aaKnown RBP28.02■■■□□ 2.08
SMIM12-202ENST00000423898 TBC1D2BQ9UPU7 963 aa28.02■■■□□ 2.08
SMIM12-202ENST00000423898 PRAMEF22A3QJZ6 481 aa28.01■■■□□ 2.07
SMIM12-202ENST00000423898 USP16Q9Y5T5 823 aa28■■■□□ 2.07
SMIM12-202ENST00000423898 BCORQ6W2J9 1755 aa27.99■■■□□ 2.07
SMIM12-202ENST00000423898 SENP3-EIF4A1A0A087X0R7 540 aa27.99■■■□□ 2.07
SMIM12-202ENST00000423898 SNRPA1P09661 255 aaKnown RBP27.99■■■□□ 2.07
SMIM12-202ENST00000423898 PIP4K2AP48426 406 aaPredicted RBP27.99■■■□□ 2.07
SMIM12-202ENST00000423898 DDX10Q13206 875 aaKnown RBP27.99■■■□□ 2.07
SMIM12-202ENST00000423898 TBC1D9BQ66K14 1250 aa27.99■■■□□ 2.07
SMIM12-202ENST00000423898 PLEKHF1Q96S99 279 aa27.99■■■□□ 2.07
SMIM12-202ENST00000423898 RALBP1Q15311 655 aa27.98■■■□□ 2.07
SMIM12-202ENST00000423898 TAF7Q15545 349 aaPredicted RBP27.98■■■□□ 2.07
SMIM12-202ENST00000423898 DLEC1Q9Y238 1755 aa27.98■■■□□ 2.07
SMIM12-202ENST00000423898 MAPK8IP3Q9UPT6 1336 aa27.97■■■□□ 2.07
SMIM12-202ENST00000423898 CARMIL3Q8ND23 1372 aa27.97■■■□□ 2.07
SMIM12-202ENST00000423898 PNNQ9H307 717 aaKnown RBP27.96■■■□□ 2.07
SMIM12-202ENST00000423898 MIS18AQ9NYP9 233 aa27.96■■■□□ 2.07
SMIM12-202ENST00000423898 NFE2L2Q16236 605 aa27.95■■■□□ 2.06
SMIM12-202ENST00000423898 KDM3BQ7LBC6 1761 aa27.95■■■□□ 2.06
SMIM12-202ENST00000423898 LAMB4A4D0S4 1761 aa27.94■■■□□ 2.06
SMIM12-202ENST00000423898 CAMTA2O94983 1202 aa27.94■■■□□ 2.06
SMIM12-202ENST00000423898 DZIP3Q86Y13 1208 aaKnown RBP27.94■■■□□ 2.06
SMIM12-202ENST00000423898 ANKRD31Q8N7Z5 1873 aa27.93■■■□□ 2.06
SMIM12-202ENST00000423898 C2CD5Q86YS7 1000 aa27.92■■■□□ 2.06
SMIM12-202ENST00000423898 C9orf131Q5VYM1 1079 aa27.91■■■□□ 2.06
SMIM12-202ENST00000423898 THUMPD2Q9BTF0 503 aaKnown RBP27.91■■■□□ 2.06
SMIM12-202ENST00000423898 H0YIN7 160 aa27.9■■■□□ 2.06
SMIM12-202ENST00000423898 NPHP1O15259 732 aa27.9■■■□□ 2.06
SMIM12-202ENST00000423898 CCDC24Q8N4L8 307 aa27.9■■■□□ 2.06
SMIM12-202ENST00000423898 PNISRQ8TF01 805 aaKnown RBP27.9■■■□□ 2.06
SMIM12-202ENST00000423898 SETDB2Q96T68 719 aa27.9■■■□□ 2.06
SMIM12-202ENST00000423898 SBF1O95248 1867 aa27.89■■■□□ 2.05
SMIM12-202ENST00000423898 PRR5LQ6MZQ0 368 aa27.88■■■□□ 2.05
SMIM12-202ENST00000423898 MYBBP1AQ9BQG0 1328 aaKnown RBP27.88■■■□□ 2.05
SMIM12-202ENST00000423898 COL11A2P13942 1736 aaPredicted RBP27.87■■■□□ 2.05
SMIM12-202ENST00000423898 NBPF26B4DH59 902 aa27.87■■■□□ 2.05
SMIM12-202ENST00000423898 NBPF10Q6P3W6 841 aaKnown RBP27.87■■■□□ 2.05
SMIM12-202ENST00000423898 NBPF15Q8N660 670 aa27.87■■■□□ 2.05
SMIM12-202ENST00000423898 TTLL6Q8N841 843 aa27.87■■■□□ 2.05
SMIM12-202ENST00000423898 CNBD1Q8NA66 436 aa27.87■■■□□ 2.05
SMIM12-202ENST00000423898 RNF181Q9P0P0 153 aa27.86■■■□□ 2.05
SMIM12-202ENST00000423898 ZNF652Q9Y2D9 606 aa27.86■■■□□ 2.05
SMIM12-202ENST00000423898 PDE6BP35913 854 aa27.85■■■□□ 2.05
SMIM12-202ENST00000423898 BRIP1Q9BX63 1249 aa27.85■■■□□ 2.05
SMIM12-202ENST00000423898 ST5P78524 1137 aa27.84■■■□□ 2.05
SMIM12-202ENST00000423898 ZNF622Q969S3 477 aaKnown RBP eCLIP27.84■■■□□ 2.05
SMIM12-202ENST00000423898 KIF3CO14782 793 aa27.83■■■□□ 2.05
SMIM12-202ENST00000423898 EIF4A1P60842 406 aaKnown RBP27.83■■■□□ 2.05
SMIM12-202ENST00000423898 RASSF7Q02833 373 aa27.83■■■□□ 2.05
SMIM12-202ENST00000423898 CLEC4GQ6UXB4 293 aa27.83■■■□□ 2.05
SMIM12-202ENST00000423898 CACNA1SQ13698 1873 aa27.83■■■□□ 2.04
SMIM12-202ENST00000423898 RIPK4P57078 832 aa27.82■■■□□ 2.04
SMIM12-202ENST00000423898 PDZRN3Q9UPQ7 1066 aa27.81■■■□□ 2.04
SMIM12-202ENST00000423898 NBPF5PQ86XG9 351 aaPredicted RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms