RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CYP19A1P11511 503 aaPredicted RBP21.75■■□□□ 1.07
COL18A1-205ENST00000423214 USPL1Q5W0Q7 1092 aa21.75■■□□□ 1.07
COL18A1-205ENST00000423214 TTC5Q8N0Z6 440 aa21.75■■□□□ 1.07
COL18A1-205ENST00000423214 CCDC88AQ3V6T2 1871 aa21.75■■□□□ 1.07
COL18A1-205ENST00000423214 PIM2Q9P1W9 311 aa21.74■■□□□ 1.07
COL18A1-205ENST00000423214 CACNA1SQ13698 1873 aa21.73■■□□□ 1.07
COL18A1-205ENST00000423214 TNRC6CQ9HCJ0 1690 aaKnown RBP21.73■■□□□ 1.07
COL18A1-205ENST00000423214 POLRMTO00411 1230 aaKnown RBP21.73■■□□□ 1.07
COL18A1-205ENST00000423214 VSIG10Q8N0Z9 540 aa21.73■■□□□ 1.07
COL18A1-205ENST00000423214 GAS2L2Q8NHY3 880 aa21.73■■□□□ 1.07
COL18A1-205ENST00000423214 ZBTB1Q9Y2K1 713 aa21.73■■□□□ 1.07
COL18A1-205ENST00000423214 BCORQ6W2J9 1755 aa21.72■■□□□ 1.07
COL18A1-205ENST00000423214 TEFQ10587 303 aa21.72■■□□□ 1.07
COL18A1-205ENST00000423214 DALRD3Q5D0E6 543 aaKnown RBP21.71■■□□□ 1.07
COL18A1-205ENST00000423214 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
COL18A1-205ENST00000423214 ANKRD31Q8N7Z5 1873 aa21.71■■□□□ 1.07
COL18A1-205ENST00000423214 GNAT3A8MTJ3 354 aa21.7■■□□□ 1.06
COL18A1-205ENST00000423214 HSPA6P17066 643 aa21.7■■□□□ 1.06
COL18A1-205ENST00000423214 KCNA3P22001 575 aa21.7■■□□□ 1.06
COL18A1-205ENST00000423214 CFAP53Q96M91 514 aa21.7■■□□□ 1.06
COL18A1-205ENST00000423214 NARFQ9UHQ1 456 aa21.7■■□□□ 1.06
COL18A1-205ENST00000423214 KIF3CO14782 793 aa21.69■■□□□ 1.06
COL18A1-205ENST00000423214 TM4SF1P30408 202 aa21.69■■□□□ 1.06
COL18A1-205ENST00000423214 CHRNA5P30532 468 aa21.69■■□□□ 1.06
COL18A1-205ENST00000423214 STARD3NLO95772 234 aa21.68■■□□□ 1.06
COL18A1-205ENST00000423214 CANXP27824 592 aaKnown RBP21.68■■□□□ 1.06
COL18A1-205ENST00000423214 COL11A2P13942 1736 aaPredicted RBP21.67■■□□□ 1.06
COL18A1-205ENST00000423214 HEG1Q9ULI3 1381 aa21.66■■□□□ 1.06
COL18A1-205ENST00000423214 NFIXQ14938 502 aa21.66■■□□□ 1.06
COL18A1-205ENST00000423214 C9orf131Q5VYM1 1079 aa21.66■■□□□ 1.06
COL18A1-205ENST00000423214 DLG5Q8TDM6 1919 aa21.66■■□□□ 1.06
COL18A1-205ENST00000423214 A0A087WZG4 1122 aa21.65■■□□□ 1.06
COL18A1-205ENST00000423214 ZNF790Q6PG37 636 aa21.65■■□□□ 1.06
COL18A1-205ENST00000423214 WDR90Q96KV7 1748 aa21.65■■□□□ 1.06
COL18A1-205ENST00000423214 PRKAR2BP31323 418 aa21.64■■□□□ 1.05
COL18A1-205ENST00000423214 ZNF496Q96IT1 587 aaPredicted RBP21.64■■□□□ 1.05
COL18A1-205ENST00000423214 RNF181Q9P0P0 153 aa21.64■■□□□ 1.05
COL18A1-205ENST00000423214 ZNF330Q9Y3S2 320 aaPredicted RBP21.64■■□□□ 1.05
COL18A1-205ENST00000423214 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.05
COL18A1-205ENST00000423214 CEMIPQ8WUJ3 1361 aa21.63■■□□□ 1.05
COL18A1-205ENST00000423214 SERPINB2P05120 415 aa21.63■■□□□ 1.05
COL18A1-205ENST00000423214 IL17REQ8NFR9 667 aa21.63■■□□□ 1.05
COL18A1-205ENST00000423214 TEX13AQ9BXU3 409 aaPredicted RBP21.63■■□□□ 1.05
COL18A1-205ENST00000423214 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
COL18A1-205ENST00000423214 ARFGEF2Q9Y6D5 1785 aa21.63■■□□□ 1.05
COL18A1-205ENST00000423214 DICER1Q9UPY3 1922 aaKnown RBP21.63■■□□□ 1.05
COL18A1-205ENST00000423214 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
COL18A1-205ENST00000423214 FMNL2Q96PY5 1086 aa21.62■■□□□ 1.05
COL18A1-205ENST00000423214 BCL2L12Q9HB09 334 aa21.62■■□□□ 1.05
COL18A1-205ENST00000423214 NMRK2Q9NPI5 230 aa21.62■■□□□ 1.05
COL18A1-205ENST00000423214 CARMIL3Q8ND23 1372 aa21.61■■□□□ 1.05
COL18A1-205ENST00000423214 TOMM70O94826 608 aa21.61■■□□□ 1.05
COL18A1-205ENST00000423214 EIF5P55010 431 aaKnown RBP21.61■■□□□ 1.05
COL18A1-205ENST00000423214 BICDL1Q6ZP65 573 aa21.61■■□□□ 1.05
COL18A1-205ENST00000423214 C16orf71Q8IYS4 520 aaPredicted RBP21.61■■□□□ 1.05
COL18A1-205ENST00000423214 RSPH6AQ9H0K4 717 aa21.61■■□□□ 1.05
COL18A1-205ENST00000423214 KDM2BQ8NHM5 1336 aa21.6■■□□□ 1.05
COL18A1-205ENST00000423214 FER1L6Q2WGJ9 1857 aa21.6■■□□□ 1.05
COL18A1-205ENST00000423214 BTBD11A6QL63 1104 aa21.59■■□□□ 1.05
COL18A1-205ENST00000423214 U2AF1L5P0DN76 240 aaPredicted RBP21.58■■□□□ 1.05
COL18A1-205ENST00000423214 U2AF1Q01081 240 aaKnown RBP eCLIP21.58■■□□□ 1.05
COL18A1-205ENST00000423214 RASSF7Q02833 373 aa21.58■■□□□ 1.05
COL18A1-205ENST00000423214 C2CD5Q86YS7 1000 aa21.58■■□□□ 1.05
COL18A1-205ENST00000423214 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
COL18A1-205ENST00000423214 PHACTR3Q96KR7 559 aa21.58■■□□□ 1.05
COL18A1-205ENST00000423214 IL6STP40189 918 aaPredicted RBP21.57■■□□□ 1.04
COL18A1-205ENST00000423214 TTLL6Q8N841 843 aa21.57■■□□□ 1.04
COL18A1-205ENST00000423214 H0YIN7 160 aa21.56■■□□□ 1.04
COL18A1-205ENST00000423214 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
COL18A1-205ENST00000423214 APLP1P51693 650 aa21.56■■□□□ 1.04
COL18A1-205ENST00000423214 TBC1D9BQ66K14 1250 aa21.56■■□□□ 1.04
COL18A1-205ENST00000423214 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
COL18A1-205ENST00000423214 KDM3BQ7LBC6 1761 aa21.56■■□□□ 1.04
COL18A1-205ENST00000423214 NPHP1O15259 732 aa21.55■■□□□ 1.04
COL18A1-205ENST00000423214 ZC3H4Q9UPT8 1303 aaKnown RBP21.55■■□□□ 1.04
COL18A1-205ENST00000423214 RBM46Q8TBY0 533 aaKnown RBP21.54■■□□□ 1.04
COL18A1-205ENST00000423214 A1BGP04217 495 aa21.53■■□□□ 1.04
COL18A1-205ENST00000423214 SLX4Q8IY92 1834 aa21.52■■□□□ 1.04
COL18A1-205ENST00000423214 KCNQ3O43525 872 aa21.52■■□□□ 1.04
COL18A1-205ENST00000423214 LMNB1P20700 586 aa21.52■■□□□ 1.04
COL18A1-205ENST00000423214 PDE6BP35913 854 aa21.52■■□□□ 1.04
COL18A1-205ENST00000423214 MCM10Q7L590 875 aa21.52■■□□□ 1.04
COL18A1-205ENST00000423214 PDZRN3Q9UPQ7 1066 aa21.52■■□□□ 1.04
COL18A1-205ENST00000423214 PRR5LQ6MZQ0 368 aa21.51■■□□□ 1.03
COL18A1-205ENST00000423214 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
COL18A1-205ENST00000423214 CNBD1Q8NA66 436 aa21.51■■□□□ 1.03
COL18A1-205ENST00000423214 ZNF622Q969S3 477 aaKnown RBP eCLIP21.51■■□□□ 1.03
COL18A1-205ENST00000423214 SETDB2Q96T68 719 aa21.51■■□□□ 1.03
COL18A1-205ENST00000423214 CAMTA2O94983 1202 aa21.5■■□□□ 1.03
COL18A1-205ENST00000423214 NEFMP07197 916 aa21.5■■□□□ 1.03
COL18A1-205ENST00000423214 ST5P78524 1137 aa21.5■■□□□ 1.03
COL18A1-205ENST00000423214 BRIP1Q9BX63 1249 aa21.5■■□□□ 1.03
COL18A1-205ENST00000423214 RRAGCQ9HB90 399 aa21.49■■□□□ 1.03
COL18A1-205ENST00000423214 NUP98P52948 1817 aa21.49■■□□□ 1.03
COL18A1-205ENST00000423214 SNRPA1P09661 255 aaKnown RBP21.48■■□□□ 1.03
COL18A1-205ENST00000423214 PIP4K2AP48426 406 aaPredicted RBP21.48■■□□□ 1.03
COL18A1-205ENST00000423214 FSTL1Q12841 308 aa21.48■■□□□ 1.03
COL18A1-205ENST00000423214 CCDC24Q8N4L8 307 aa21.48■■□□□ 1.03
COL18A1-205ENST00000423214 ZNF652Q9Y2D9 606 aa21.48■■□□□ 1.03
COL18A1-205ENST00000423214 USP16Q9Y5T5 823 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms