RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 RTF1Q92541 710 aaKnown RBP33.99■■■■□ 3.03
SMDT1-202ENST00000422252 KIAA1551Q9HCM1 1747 aa33.99■■■■□ 3.03
SMDT1-202ENST00000422252 BTBD11A6QL63 1104 aa33.98■■■■□ 3.03
SMDT1-202ENST00000422252 DDR1Q08345 913 aa33.98■■■■□ 3.03
SMDT1-202ENST00000422252 FMNL2Q96PY5 1086 aa33.98■■■■□ 3.03
SMDT1-202ENST00000422252 TEX13AQ9BXU3 409 aaPredicted RBP33.98■■■■□ 3.03
SMDT1-202ENST00000422252 NARFQ9UHQ1 456 aa33.98■■■■□ 3.03
SMDT1-202ENST00000422252 CANXP27824 592 aaKnown RBP33.97■■■■□ 3.03
SMDT1-202ENST00000422252 A0A0G2JLW4 131 aa33.96■■■■□ 3.03
SMDT1-202ENST00000422252 N4BP2Q86UW6 1770 aaPredicted RBP33.95■■■■□ 3.03
SMDT1-202ENST00000422252 TM4SF1P30408 202 aa33.95■■■■□ 3.03
SMDT1-202ENST00000422252 MCM10Q7L590 875 aa33.95■■■■□ 3.03
SMDT1-202ENST00000422252 POLRMTO00411 1230 aaKnown RBP33.94■■■■□ 3.02
SMDT1-202ENST00000422252 HTATSF1O43719 755 aaKnown RBP33.94■■■■□ 3.02
SMDT1-202ENST00000422252 KCNQ3O43525 872 aa33.93■■■■□ 3.02
SMDT1-202ENST00000422252 DPEP1P16444 411 aa33.93■■■■□ 3.02
SMDT1-202ENST00000422252 EIF5P55010 431 aaKnown RBP33.92■■■■□ 3.02
SMDT1-202ENST00000422252 NEFMP07197 916 aa33.91■■■■□ 3.02
SMDT1-202ENST00000422252 DCTN1Q14203 1278 aa33.9■■■■□ 3.02
SMDT1-202ENST00000422252 BCL2L12Q9HB09 334 aa33.9■■■■□ 3.02
SMDT1-202ENST00000422252 A0A087WZG4 1122 aa33.89■■■■□ 3.02
SMDT1-202ENST00000422252 RALBP1Q15311 655 aa33.89■■■■□ 3.02
SMDT1-202ENST00000422252 BCS1LQ9Y276 419 aa33.89■■■■□ 3.02
SMDT1-202ENST00000422252 NFIXQ14938 502 aa33.88■■■■□ 3.01
SMDT1-202ENST00000422252 DDX10Q13206 875 aaKnown RBP33.87■■■■□ 3.01
SMDT1-202ENST00000422252 KCNA3P22001 575 aa33.86■■■■□ 3.01
SMDT1-202ENST00000422252 PLEKHF1Q96S99 279 aa33.86■■■■□ 3.01
SMDT1-202ENST00000422252 IL6STP40189 918 aaPredicted RBP33.85■■■■□ 3.01
SMDT1-202ENST00000422252 A1BGP04217 495 aa33.84■■■■□ 3.01
SMDT1-202ENST00000422252 ZNF330Q9Y3S2 320 aaPredicted RBP33.84■■■■□ 3.01
SMDT1-202ENST00000422252 ATP10DQ9P241 1426 aa33.84■■■■□ 3.01
SMDT1-202ENST00000422252 BRCA1P38398 1863 aaKnown RBP33.83■■■■□ 3.01
SMDT1-202ENST00000422252 PNNQ9H307 717 aaKnown RBP33.83■■■■□ 3.01
SMDT1-202ENST00000422252 ADCY9O60503 1353 aa33.83■■■■□ 3.01
SMDT1-202ENST00000422252 TAF7Q15545 349 aaPredicted RBP33.82■■■■□ 3
SMDT1-202ENST00000422252 PIM2Q9P1W9 311 aa33.82■■■■□ 3
SMDT1-202ENST00000422252 SNRPA1P09661 255 aaKnown RBP33.81■■■■□ 3
SMDT1-202ENST00000422252 USP16Q9Y5T5 823 aa33.81■■■■□ 3
SMDT1-202ENST00000422252 GIGYF1O75420 1035 aaPredicted RBP33.8■■■■□ 3
SMDT1-202ENST00000422252 SERPINB2P05120 415 aa33.8■■■■□ 3
SMDT1-202ENST00000422252 NPM2Q86SE8 214 aaKnown RBP33.8■■■■□ 3
SMDT1-202ENST00000422252 TBC1D2BQ9UPU7 963 aa33.8■■■■□ 3
SMDT1-202ENST00000422252 NRXN2Q9P2S2 1712 aa33.79■■■■□ 3
SMDT1-202ENST00000422252 AFDNP55196 1824 aaKnown RBP33.79■■■■□ 3
SMDT1-202ENST00000422252 PRAMEF22A3QJZ6 481 aa33.79■■■■□ 3
SMDT1-202ENST00000422252 NFE2L2Q16236 605 aa33.79■■■■□ 3
SMDT1-202ENST00000422252 CHRNA5P30532 468 aa33.78■■■■□ 3
SMDT1-202ENST00000422252 DLG5Q8TDM6 1919 aa33.78■■■■□ 3
SMDT1-202ENST00000422252 MAPK8IP3Q9UPT6 1336 aa33.78■■■■□ 3
SMDT1-202ENST00000422252 SCN7AQ01118 1682 aa33.77■■■■□ 3
SMDT1-202ENST00000422252 C1QTNF8P60827 252 aa33.77■■■■□ 3
SMDT1-202ENST00000422252 DALRD3Q5D0E6 543 aaKnown RBP33.77■■■■□ 3
SMDT1-202ENST00000422252 BICDL1Q6ZP65 573 aa33.77■■■■□ 3
SMDT1-202ENST00000422252 ARHGAP27Q6ZUM4 889 aa33.76■■■□□ 2.99
SMDT1-202ENST00000422252 TBC1D9BQ66K14 1250 aa33.75■■■□□ 2.99
SMDT1-202ENST00000422252 MIS18AQ9NYP9 233 aa33.75■■■□□ 2.99
SMDT1-202ENST00000422252 PNISRQ8TF01 805 aaKnown RBP33.74■■■□□ 2.99
SMDT1-202ENST00000422252 MYBBP1AQ9BQG0 1328 aaKnown RBP33.74■■■□□ 2.99
SMDT1-202ENST00000422252 ARFGEF1Q9Y6D6 1849 aa33.74■■■□□ 2.99
SMDT1-202ENST00000422252 GPBP1L1Q9HC44 474 aaPredicted RBP33.73■■■□□ 2.99
SMDT1-202ENST00000422252 CAMTA2O94983 1202 aa33.72■■■□□ 2.99
SMDT1-202ENST00000422252 PIP4K2AP48426 406 aaPredicted RBP33.72■■■□□ 2.99
SMDT1-202ENST00000422252 DZIP3Q86Y13 1208 aaKnown RBP33.71■■■□□ 2.99
SMDT1-202ENST00000422252 ZNF526Q8TF50 670 aaPredicted RBP33.69■■■□□ 2.98
SMDT1-202ENST00000422252 THUMPD2Q9BTF0 503 aaKnown RBP33.69■■■□□ 2.98
SMDT1-202ENST00000422252 CARMIL3Q8ND23 1372 aa33.69■■■□□ 2.98
SMDT1-202ENST00000422252 BCORQ6W2J9 1755 aa33.67■■■□□ 2.98
SMDT1-202ENST00000422252 KDM3BQ7LBC6 1761 aa33.67■■■□□ 2.98
SMDT1-202ENST00000422252 SETDB2Q96T68 719 aa33.66■■■□□ 2.98
SMDT1-202ENST00000422252 NBPF26B4DH59 902 aa33.65■■■□□ 2.98
SMDT1-202ENST00000422252 NBPF10Q6P3W6 841 aaKnown RBP33.65■■■□□ 2.98
SMDT1-202ENST00000422252 NBPF15Q8N660 670 aa33.65■■■□□ 2.98
SMDT1-202ENST00000422252 C2CD5Q86YS7 1000 aa33.64■■■□□ 2.98
SMDT1-202ENST00000422252 H0YIN7 160 aa33.63■■■□□ 2.97
SMDT1-202ENST00000422252 RIPK4P57078 832 aa33.63■■■□□ 2.97
SMDT1-202ENST00000422252 EIF4A1P60842 406 aaKnown RBP33.63■■■□□ 2.97
SMDT1-202ENST00000422252 PRR5LQ6MZQ0 368 aa33.63■■■□□ 2.97
SMDT1-202ENST00000422252 LAMB4A4D0S4 1761 aa33.62■■■□□ 2.97
SMDT1-202ENST00000422252 DLEC1Q9Y238 1755 aa33.62■■■□□ 2.97
SMDT1-202ENST00000422252 CLEC4GQ6UXB4 293 aa33.62■■■□□ 2.97
SMDT1-202ENST00000422252 BRIP1Q9BX63 1249 aa33.61■■■□□ 2.97
SMDT1-202ENST00000422252 ZNF652Q9Y2D9 606 aa33.61■■■□□ 2.97
SMDT1-202ENST00000422252 TTLL6Q8N841 843 aa33.6■■■□□ 2.97
SMDT1-202ENST00000422252 PDZRN3Q9UPQ7 1066 aa33.6■■■□□ 2.97
SMDT1-202ENST00000422252 PDE6BP35913 854 aa33.59■■■□□ 2.97
SMDT1-202ENST00000422252 TMPOP42166 694 aaKnown RBP33.59■■■□□ 2.97
SMDT1-202ENST00000422252 C9orf131Q5VYM1 1079 aa33.59■■■□□ 2.97
SMDT1-202ENST00000422252 CCDC24Q8N4L8 307 aa33.59■■■□□ 2.97
SMDT1-202ENST00000422252 CNBD1Q8NA66 436 aa33.59■■■□□ 2.97
SMDT1-202ENST00000422252 SENP3-EIF4A1A0A087X0R7 540 aa33.58■■■□□ 2.97
SMDT1-202ENST00000422252 NPHP1O15259 732 aa33.58■■■□□ 2.97
SMDT1-202ENST00000422252 ANKRD31Q8N7Z5 1873 aa33.58■■■□□ 2.97
SMDT1-202ENST00000422252 RGL2O15211 777 aa33.57■■■□□ 2.96
SMDT1-202ENST00000422252 LMOD3Q0VAK6 560 aa33.57■■■□□ 2.96
SMDT1-202ENST00000422252 ST5P78524 1137 aa33.56■■■□□ 2.96
SMDT1-202ENST00000422252 WDR43Q15061 677 aaKnown RBP eCLIP33.56■■■□□ 2.96
SMDT1-202ENST00000422252 PRKRIP1Q9H875 184 aaPredicted RBP33.56■■■□□ 2.96
SMDT1-202ENST00000422252 TSPYL4Q9UJ04 414 aa33.56■■■□□ 2.96
SMDT1-202ENST00000422252 CCDC146Q8IYE0 955 aa33.55■■■□□ 2.96
SMDT1-202ENST00000422252 NBPF5PQ86XG9 351 aaPredicted RBP33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms