RNA–Protein interactions for RNA: ENST00000421582.2

CCDC107-205, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-205ENST00000421582 ZNF496Q96IT1 587 aaPredicted RBP29.61■■■□□ 2.33
CCDC107-205ENST00000421582 NUDCQ9Y266 331 aa29.61■■■□□ 2.33
CCDC107-205ENST00000421582 BRCA1P38398 1863 aaKnown RBP29.6■■■□□ 2.33
CCDC107-205ENST00000421582 ZNF790Q6PG37 636 aa29.6■■■□□ 2.33
CCDC107-205ENST00000421582 HEG1Q9ULI3 1381 aa29.59■■■□□ 2.33
CCDC107-205ENST00000421582 ZPR1O75312 459 aa29.58■■■□□ 2.33
CCDC107-205ENST00000421582 POLRMTO00411 1230 aaKnown RBP29.57■■■□□ 2.32
CCDC107-205ENST00000421582 TM4SF1P30408 202 aa29.57■■■□□ 2.32
CCDC107-205ENST00000421582 NARFQ9UHQ1 456 aa29.57■■■□□ 2.32
CCDC107-205ENST00000421582 KCNQ3O43525 872 aa29.56■■■□□ 2.32
CCDC107-205ENST00000421582 CANXP27824 592 aaKnown RBP29.56■■■□□ 2.32
CCDC107-205ENST00000421582 BCL2L12Q9HB09 334 aa29.56■■■□□ 2.32
CCDC107-205ENST00000421582 BCS1LQ9Y276 419 aa29.56■■■□□ 2.32
CCDC107-205ENST00000421582 KCNA3P22001 575 aa29.55■■■□□ 2.32
CCDC107-205ENST00000421582 GIGYF1O75420 1035 aaPredicted RBP29.54■■■□□ 2.32
CCDC107-205ENST00000421582 FCHSD2O94868 740 aa29.54■■■□□ 2.32
CCDC107-205ENST00000421582 C1QTNF8P60827 252 aa29.54■■■□□ 2.32
CCDC107-205ENST00000421582 AFDNP55196 1824 aaKnown RBP29.53■■■□□ 2.32
CCDC107-205ENST00000421582 STARD3NLO95772 234 aa29.52■■■□□ 2.32
CCDC107-205ENST00000421582 NFIXQ14938 502 aa29.52■■■□□ 2.32
CCDC107-205ENST00000421582 MCM10Q7L590 875 aa29.52■■■□□ 2.32
CCDC107-205ENST00000421582 BTBD11A6QL63 1104 aa29.51■■■□□ 2.32
CCDC107-205ENST00000421582 EIF5P55010 431 aaKnown RBP29.51■■■□□ 2.32
CCDC107-205ENST00000421582 NRXN2Q9P2S2 1712 aa29.51■■■□□ 2.31
CCDC107-205ENST00000421582 FMNL2Q96PY5 1086 aa29.5■■■□□ 2.31
CCDC107-205ENST00000421582 SCN7AQ01118 1682 aa29.5■■■□□ 2.31
CCDC107-205ENST00000421582 DCTN1Q14203 1278 aa29.49■■■□□ 2.31
CCDC107-205ENST00000421582 CHRNA5P30532 468 aa29.48■■■□□ 2.31
CCDC107-205ENST00000421582 ZNF526Q8TF50 670 aaPredicted RBP29.48■■■□□ 2.31
CCDC107-205ENST00000421582 ARFGEF1Q9Y6D6 1849 aa29.47■■■□□ 2.31
CCDC107-205ENST00000421582 RTF1Q92541 710 aaKnown RBP29.46■■■□□ 2.31
CCDC107-205ENST00000421582 TEX13AQ9BXU3 409 aaPredicted RBP29.46■■■□□ 2.31
CCDC107-205ENST00000421582 A1BGP04217 495 aa29.45■■■□□ 2.31
CCDC107-205ENST00000421582 ZNF330Q9Y3S2 320 aaPredicted RBP29.45■■■□□ 2.31
CCDC107-205ENST00000421582 PRAMEF22A3QJZ6 481 aa29.45■■■□□ 2.3
CCDC107-205ENST00000421582 GPBP1L1Q9HC44 474 aaPredicted RBP29.45■■■□□ 2.3
CCDC107-205ENST00000421582 PIM2Q9P1W9 311 aa29.45■■■□□ 2.3
CCDC107-205ENST00000421582 CARMIL3Q8ND23 1372 aa29.44■■■□□ 2.3
CCDC107-205ENST00000421582 ARHGAP27Q6ZUM4 889 aa29.44■■■□□ 2.3
CCDC107-205ENST00000421582 DLG5Q8TDM6 1919 aa29.43■■■□□ 2.3
CCDC107-205ENST00000421582 SERPINB2P05120 415 aa29.43■■■□□ 2.3
CCDC107-205ENST00000421582 IL6STP40189 918 aaPredicted RBP29.43■■■□□ 2.3
CCDC107-205ENST00000421582 BICDL1Q6ZP65 573 aa29.43■■■□□ 2.3
CCDC107-205ENST00000421582 TBC1D2BQ9UPU7 963 aa29.43■■■□□ 2.3
CCDC107-205ENST00000421582 A0A087WZG4 1122 aa29.42■■■□□ 2.3
CCDC107-205ENST00000421582 SENP3-EIF4A1A0A087X0R7 540 aa29.42■■■□□ 2.3
CCDC107-205ENST00000421582 USP16Q9Y5T5 823 aa29.42■■■□□ 2.3
CCDC107-205ENST00000421582 PIP4K2AP48426 406 aaPredicted RBP29.41■■■□□ 2.3
CCDC107-205ENST00000421582 DALRD3Q5D0E6 543 aaKnown RBP29.41■■■□□ 2.3
CCDC107-205ENST00000421582 TBC1D9BQ66K14 1250 aa29.41■■■□□ 2.3
CCDC107-205ENST00000421582 PLEKHF1Q96S99 279 aa29.41■■■□□ 2.3
CCDC107-205ENST00000421582 HTATSF1O43719 755 aaKnown RBP29.4■■■□□ 2.3
CCDC107-205ENST00000421582 BCORQ6W2J9 1755 aa29.39■■■□□ 2.3
CCDC107-205ENST00000421582 DLEC1Q9Y238 1755 aa29.39■■■□□ 2.3
CCDC107-205ENST00000421582 CAMTA2O94983 1202 aa29.36■■■□□ 2.29
CCDC107-205ENST00000421582 MIS18AQ9NYP9 233 aa29.36■■■□□ 2.29
CCDC107-205ENST00000421582 ANKRD31Q8N7Z5 1873 aa29.35■■■□□ 2.29
CCDC107-205ENST00000421582 SNRPA1P09661 255 aaKnown RBP29.35■■■□□ 2.29
CCDC107-205ENST00000421582 KDM3BQ7LBC6 1761 aa29.33■■■□□ 2.29
CCDC107-205ENST00000421582 CEP350Q5VT06 3117 aa29.33■■■□□ 2.29
CCDC107-205ENST00000421582 TAF7Q15545 349 aaPredicted RBP29.33■■■□□ 2.29
CCDC107-205ENST00000421582 NEFMP07197 916 aa29.32■■■□□ 2.28
CCDC107-205ENST00000421582 DDX10Q13206 875 aaKnown RBP29.32■■■□□ 2.28
CCDC107-205ENST00000421582 NFE2L2Q16236 605 aa29.32■■■□□ 2.28
CCDC107-205ENST00000421582 DZIP3Q86Y13 1208 aaKnown RBP29.32■■■□□ 2.28
CCDC107-205ENST00000421582 CCDC24Q8N4L8 307 aa29.32■■■□□ 2.28
CCDC107-205ENST00000421582 THUMPD2Q9BTF0 503 aaKnown RBP29.32■■■□□ 2.28
CCDC107-205ENST00000421582 LAMB4A4D0S4 1761 aa29.31■■■□□ 2.28
CCDC107-205ENST00000421582 C9orf131Q5VYM1 1079 aa29.31■■■□□ 2.28
CCDC107-205ENST00000421582 C2CD5Q86YS7 1000 aa29.31■■■□□ 2.28
CCDC107-205ENST00000421582 COL11A2P13942 1736 aaPredicted RBP29.31■■■□□ 2.28
CCDC107-205ENST00000421582 NBPF26B4DH59 902 aa29.3■■■□□ 2.28
CCDC107-205ENST00000421582 KIF3CO14782 793 aa29.3■■■□□ 2.28
CCDC107-205ENST00000421582 RALBP1Q15311 655 aa29.3■■■□□ 2.28
CCDC107-205ENST00000421582 PRR5LQ6MZQ0 368 aa29.3■■■□□ 2.28
CCDC107-205ENST00000421582 NBPF10Q6P3W6 841 aaKnown RBP29.3■■■□□ 2.28
CCDC107-205ENST00000421582 NPM2Q86SE8 214 aaKnown RBP29.3■■■□□ 2.28
CCDC107-205ENST00000421582 NBPF15Q8N660 670 aa29.3■■■□□ 2.28
CCDC107-205ENST00000421582 MAPK8IP3Q9UPT6 1336 aa29.28■■■□□ 2.28
CCDC107-205ENST00000421582 SBF1O95248 1867 aa29.27■■■□□ 2.28
CCDC107-205ENST00000421582 RASSF7Q02833 373 aa29.26■■■□□ 2.27
CCDC107-205ENST00000421582 H0YIN7 160 aa29.25■■■□□ 2.27
CCDC107-205ENST00000421582 SETDB2Q96T68 719 aa29.25■■■□□ 2.27
CCDC107-205ENST00000421582 RNF181Q9P0P0 153 aa29.25■■■□□ 2.27
CCDC107-205ENST00000421582 TTLL6Q8N841 843 aa29.24■■■□□ 2.27
CCDC107-205ENST00000421582 CNBD1Q8NA66 436 aa29.23■■■□□ 2.27
CCDC107-205ENST00000421582 BRIP1Q9BX63 1249 aa29.23■■■□□ 2.27
CCDC107-205ENST00000421582 PNISRQ8TF01 805 aaKnown RBP29.22■■■□□ 2.27
CCDC107-205ENST00000421582 NMRK2Q9NPI5 230 aa29.22■■■□□ 2.27
CCDC107-205ENST00000421582 PRELPP51888 382 aa29.21■■■□□ 2.27
CCDC107-205ENST00000421582 EIF4A1P60842 406 aaKnown RBP29.21■■■□□ 2.27
CCDC107-205ENST00000421582 PNNQ9H307 717 aaKnown RBP29.21■■■□□ 2.27
CCDC107-205ENST00000421582 MYBBP1AQ9BQG0 1328 aaKnown RBP29.21■■■□□ 2.27
CCDC107-205ENST00000421582 PDE6BP35913 854 aa29.2■■■□□ 2.26
CCDC107-205ENST00000421582 CLEC4GQ6UXB4 293 aa29.2■■■□□ 2.26
CCDC107-205ENST00000421582 ZNF622Q969S3 477 aaKnown RBP eCLIP29.2■■■□□ 2.26
CCDC107-205ENST00000421582 NPHP1O15259 732 aa29.18■■■□□ 2.26
CCDC107-205ENST00000421582 ZNF652Q9Y2D9 606 aa29.18■■■□□ 2.26
CCDC107-205ENST00000421582 NFKBIEO00221 500 aa29.17■■■□□ 2.26
CCDC107-205ENST00000421582 RIPK4P57078 832 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms