RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
SEMA4D-204ENST00000420101 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
SEMA4D-204ENST00000420101 G2E3Q7L622 706 aa18.24■□□□□ 0.51
SEMA4D-204ENST00000420101 SNX21Q969T3 373 aa18.24■□□□□ 0.51
SEMA4D-204ENST00000420101 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 HSCBQ8IWL3 235 aa18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 HOXB7P09629 217 aa18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 HS1BP3Q53T59 392 aa18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 MTERF4Q7Z6M4 381 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 ZBTB40Q9NUA8 1239 aa18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
SEMA4D-204ENST00000420101 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
SEMA4D-204ENST00000420101 COL16A1Q07092 1604 aaPredicted RBP18.22■□□□□ 0.51
SEMA4D-204ENST00000420101 FLIIQ13045 1269 aa18.22■□□□□ 0.51
SEMA4D-204ENST00000420101 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 PPP1R9BQ96SB3 815 aa18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 PARP4Q9UKK3 1724 aaKnown RBP18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 DDIT3P35638 169 aa18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 ANP32BQ92688 251 aaKnown RBP18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 PDZRN3Q9UPQ7 1066 aa18.21■□□□□ 0.51
SEMA4D-204ENST00000420101 F6X3S4 739 aa18.2■□□□□ 0.5
SEMA4D-204ENST00000420101 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
SEMA4D-204ENST00000420101 INTS3Q68E01 1043 aaKnown RBP18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 C1orf115Q9H7X2 142 aa18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 CHPF2Q9P2E5 772 aa18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 PKD1L3Q7Z443 1732 aa18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 SMC5Q8IY18 1101 aa18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 CERKQ8TCT0 537 aa18.19■□□□□ 0.5
SEMA4D-204ENST00000420101 OFD1O75665 1012 aa18.18■□□□□ 0.5
SEMA4D-204ENST00000420101 ZSCAN30Q86W11 494 aa18.18■□□□□ 0.5
SEMA4D-204ENST00000420101 GZF1Q9H116 711 aaPredicted RBP18.18■□□□□ 0.5
SEMA4D-204ENST00000420101 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-204ENST00000420101 PHAXQ9H814 394 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-204ENST00000420101 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
SEMA4D-204ENST00000420101 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
SEMA4D-204ENST00000420101 RGS12O14924 1447 aa18.16■□□□□ 0.5
SEMA4D-204ENST00000420101 ERVV-2B6SEH9 535 aa18.16■□□□□ 0.5
SEMA4D-204ENST00000420101 ANXA1P04083 346 aa18.16■□□□□ 0.5
SEMA4D-204ENST00000420101 RBM25P49756 843 aaKnown RBP18.16■□□□□ 0.5
SEMA4D-204ENST00000420101 SCN11AQ9UI33 1791 aa18.16■□□□□ 0.5
SEMA4D-204ENST00000420101 EXOC5O00471 708 aa18.15■□□□□ 0.5
SEMA4D-204ENST00000420101 HDAC1Q13547 482 aaPredicted RBP18.15■□□□□ 0.5
SEMA4D-204ENST00000420101 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
SEMA4D-204ENST00000420101 ADAMTS7Q9UKP4 1686 aa18.15■□□□□ 0.5
SEMA4D-204ENST00000420101 CLEC17AQ6ZS10 378 aa18.14■□□□□ 0.5
SEMA4D-204ENST00000420101 ZNF496Q96IT1 587 aaPredicted RBP18.14■□□□□ 0.5
SEMA4D-204ENST00000420101 ERBB4Q15303 1308 aa18.14■□□□□ 0.49
SEMA4D-204ENST00000420101 NKX1-1Q15270 411 aaPredicted RBP18.14■□□□□ 0.49
SEMA4D-204ENST00000420101 C8orf37Q96NL8 207 aa18.14■□□□□ 0.49
SEMA4D-204ENST00000420101 JCADQ9P266 1359 aa18.13■□□□□ 0.49
SEMA4D-204ENST00000420101 GOLGA6L22H0YM25 854 aa18.13■□□□□ 0.49
SEMA4D-204ENST00000420101 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
SEMA4D-204ENST00000420101 RAB3GAP1Q15042 981 aa18.13■□□□□ 0.49
SEMA4D-204ENST00000420101 NGLY1Q96IV0 654 aa18.13■□□□□ 0.49
SEMA4D-204ENST00000420101 MRC1P22897 1456 aa18.12■□□□□ 0.49
SEMA4D-204ENST00000420101 KIAA1211Q6ZU35 1233 aa18.12■□□□□ 0.49
SEMA4D-204ENST00000420101 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
SEMA4D-204ENST00000420101 HEG1Q9ULI3 1381 aa18.12■□□□□ 0.49
SEMA4D-204ENST00000420101 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
SEMA4D-204ENST00000420101 MSNP26038 577 aaKnown RBP18.12■□□□□ 0.49
SEMA4D-204ENST00000420101 MEIS3Q99687 375 aa18.12■□□□□ 0.49
SEMA4D-204ENST00000420101 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
SEMA4D-204ENST00000420101 MYL6BP14649 208 aa18.1■□□□□ 0.49
SEMA4D-204ENST00000420101 AIMP1Q12904 312 aaKnown RBP18.1■□□□□ 0.49
SEMA4D-204ENST00000420101 CDCA7Q9BWT1 371 aaPredicted RBP18.1■□□□□ 0.49
SEMA4D-204ENST00000420101 SPATA31A1Q5TZJ5 1347 aa18.1■□□□□ 0.49
SEMA4D-204ENST00000420101 PLCH1Q4KWH8 1693 aa18.1■□□□□ 0.49
SEMA4D-204ENST00000420101 A0A0G2JS52 829 aa18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 MCM5P33992 734 aa18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 THRAP3Q9Y2W1 955 aaKnown RBP18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 PI4KAP2A4QPH2 592 aa18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 PI4KAP1Q8N8J0 262 aa18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 DNAAF4Q8WXU2 420 aa18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 DDX21Q9NR30 783 aaKnown RBP eCLIP18.09■□□□□ 0.49
SEMA4D-204ENST00000420101 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 DDB1Q16531 1140 aa18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 CSPP1Q1MSJ5 1256 aa18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 ARXQ96QS3 562 aa18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 SRCIN1Q9C0H9 1055 aa18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 USP16Q9Y5T5 823 aa18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 DISP2A7MBM2 1401 aa18.08■□□□□ 0.48
SEMA4D-204ENST00000420101 GNAI3P08754 354 aa18.07■□□□□ 0.48
SEMA4D-204ENST00000420101 MEX3CQ5U5Q3 659 aaKnown RBP18.07■□□□□ 0.48
SEMA4D-204ENST00000420101 ZNF500O60304 480 aaPredicted RBP18.07■□□□□ 0.48
SEMA4D-204ENST00000420101 NASPP49321 788 aaPredicted RBP18.07■□□□□ 0.48
SEMA4D-204ENST00000420101 UNC5CLQ8IV45 518 aa18.07■□□□□ 0.48
SEMA4D-204ENST00000420101 SPATA31A5Q5VU36 1347 aa18.06■□□□□ 0.48
SEMA4D-204ENST00000420101 SPATA31A7Q8IWB4 1347 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms