RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 ARHGAP27Q6ZUM4 889 aa18.94■□□□□ 0.62
LINC01006-202ENST00000418309 IL17REQ8NFR9 667 aa18.94■□□□□ 0.62
LINC01006-202ENST00000418309 ZBTB1Q9Y2K1 713 aa18.94■□□□□ 0.62
LINC01006-202ENST00000418309 KCPQ6ZWJ8 1503 aa18.94■□□□□ 0.62
LINC01006-202ENST00000418309 ADAMTS7Q9UKP4 1686 aa18.93■□□□□ 0.62
LINC01006-202ENST00000418309 STARD3NLO95772 234 aa18.93■□□□□ 0.62
LINC01006-202ENST00000418309 PRKAR2BP31323 418 aa18.93■□□□□ 0.62
LINC01006-202ENST00000418309 KIAA1551Q9HCM1 1747 aa18.93■□□□□ 0.62
LINC01006-202ENST00000418309 TM4SF1P30408 202 aa18.92■□□□□ 0.62
LINC01006-202ENST00000418309 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
LINC01006-202ENST00000418309 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
LINC01006-202ENST00000418309 NARFQ9UHQ1 456 aa18.92■□□□□ 0.62
LINC01006-202ENST00000418309 ADCY9O60503 1353 aa18.92■□□□□ 0.62
LINC01006-202ENST00000418309 COL15A1P39059 1388 aa18.92■□□□□ 0.62
LINC01006-202ENST00000418309 POLRMTO00411 1230 aaKnown RBP18.91■□□□□ 0.62
LINC01006-202ENST00000418309 U2AF1L5P0DN76 240 aaPredicted RBP18.91■□□□□ 0.62
LINC01006-202ENST00000418309 PPP2R1AP30153 589 aa18.91■□□□□ 0.62
LINC01006-202ENST00000418309 U2AF1Q01081 240 aaKnown RBP eCLIP18.91■□□□□ 0.62
LINC01006-202ENST00000418309 ZNF790Q6PG37 636 aa18.91■□□□□ 0.62
LINC01006-202ENST00000418309 ZNF496Q96IT1 587 aaPredicted RBP18.91■□□□□ 0.62
LINC01006-202ENST00000418309 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
LINC01006-202ENST00000418309 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
LINC01006-202ENST00000418309 KCNA3P22001 575 aa18.9■□□□□ 0.62
LINC01006-202ENST00000418309 DALRD3Q5D0E6 543 aaKnown RBP18.89■□□□□ 0.61
LINC01006-202ENST00000418309 TEX13AQ9BXU3 409 aaPredicted RBP18.89■□□□□ 0.61
LINC01006-202ENST00000418309 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
LINC01006-202ENST00000418309 UBR2Q8IWV8 1755 aa18.88■□□□□ 0.61
LINC01006-202ENST00000418309 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
LINC01006-202ENST00000418309 CHRNA5P30532 468 aa18.88■□□□□ 0.61
LINC01006-202ENST00000418309 NFIXQ14938 502 aa18.88■□□□□ 0.61
LINC01006-202ENST00000418309 FMNL2Q96PY5 1086 aa18.88■□□□□ 0.61
LINC01006-202ENST00000418309 HEG1Q9ULI3 1381 aa18.88■□□□□ 0.61
LINC01006-202ENST00000418309 A0A087WZG4 1122 aa18.87■□□□□ 0.61
LINC01006-202ENST00000418309 RTF1Q92541 710 aaKnown RBP18.87■□□□□ 0.61
LINC01006-202ENST00000418309 BRCA1P38398 1863 aaKnown RBP18.86■□□□□ 0.61
LINC01006-202ENST00000418309 SERPINB2P05120 415 aa18.86■□□□□ 0.61
LINC01006-202ENST00000418309 BICDL1Q6ZP65 573 aa18.86■□□□□ 0.61
LINC01006-202ENST00000418309 NPM2Q86SE8 214 aaKnown RBP18.86■□□□□ 0.61
LINC01006-202ENST00000418309 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
LINC01006-202ENST00000418309 EIF5P55010 431 aaKnown RBP18.85■□□□□ 0.61
LINC01006-202ENST00000418309 SIPA1L3O60292 1781 aaPredicted RBP18.85■□□□□ 0.61
LINC01006-202ENST00000418309 CEMIPQ8WUJ3 1361 aa18.84■□□□□ 0.61
LINC01006-202ENST00000418309 KCNQ3O43525 872 aa18.84■□□□□ 0.61
LINC01006-202ENST00000418309 MCM10Q7L590 875 aa18.84■□□□□ 0.61
LINC01006-202ENST00000418309 AFDNP55196 1824 aaKnown RBP18.84■□□□□ 0.61
LINC01006-202ENST00000418309 ARFGEF1Q9Y6D6 1849 aa18.84■□□□□ 0.61
LINC01006-202ENST00000418309 A1BGP04217 495 aa18.83■□□□□ 0.6
LINC01006-202ENST00000418309 C9orf131Q5VYM1 1079 aa18.83■□□□□ 0.6
LINC01006-202ENST00000418309 TBC1D2BQ9UPU7 963 aa18.83■□□□□ 0.6
LINC01006-202ENST00000418309 NEFMP07197 916 aa18.82■□□□□ 0.6
LINC01006-202ENST00000418309 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
LINC01006-202ENST00000418309 DCTN1Q14203 1278 aa18.81■□□□□ 0.6
LINC01006-202ENST00000418309 KIF3CO14782 793 aa18.8■□□□□ 0.6
LINC01006-202ENST00000418309 TBC1D9BQ66K14 1250 aa18.8■□□□□ 0.6
LINC01006-202ENST00000418309 C2CD5Q86YS7 1000 aa18.8■□□□□ 0.6
LINC01006-202ENST00000418309 H0YIN7 160 aa18.79■□□□□ 0.6
LINC01006-202ENST00000418309 RNF181Q9P0P0 153 aa18.79■□□□□ 0.6
LINC01006-202ENST00000418309 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
LINC01006-202ENST00000418309 NPHP1O15259 732 aa18.78■□□□□ 0.6
LINC01006-202ENST00000418309 HTATSF1O43719 755 aaKnown RBP18.78■□□□□ 0.6
LINC01006-202ENST00000418309 TTLL6Q8N841 843 aa18.78■□□□□ 0.6
LINC01006-202ENST00000418309 NRXN2Q9P2S2 1712 aa18.77■□□□□ 0.6
LINC01006-202ENST00000418309 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
LINC01006-202ENST00000418309 SNRPA1P09661 255 aaKnown RBP18.77■□□□□ 0.6
LINC01006-202ENST00000418309 HSPA6P17066 643 aa18.77■□□□□ 0.6
LINC01006-202ENST00000418309 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
LINC01006-202ENST00000418309 TAF7Q15545 349 aaPredicted RBP18.76■□□□□ 0.59
LINC01006-202ENST00000418309 DZIP3Q86Y13 1208 aaKnown RBP18.76■□□□□ 0.59
LINC01006-202ENST00000418309 CCDC24Q8N4L8 307 aa18.76■□□□□ 0.59
LINC01006-202ENST00000418309 SETDB2Q96T68 719 aa18.76■□□□□ 0.59
LINC01006-202ENST00000418309 NMRK2Q9NPI5 230 aa18.76■□□□□ 0.59
LINC01006-202ENST00000418309 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
LINC01006-202ENST00000418309 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.59
LINC01006-202ENST00000418309 CARMIL3Q8ND23 1372 aa18.75■□□□□ 0.59
LINC01006-202ENST00000418309 PDE6BP35913 854 aa18.74■□□□□ 0.59
LINC01006-202ENST00000418309 RASSF7Q02833 373 aa18.74■□□□□ 0.59
LINC01006-202ENST00000418309 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
LINC01006-202ENST00000418309 BRIP1Q9BX63 1249 aa18.74■□□□□ 0.59
LINC01006-202ENST00000418309 MIS18AQ9NYP9 233 aa18.74■□□□□ 0.59
LINC01006-202ENST00000418309 SCN7AQ01118 1682 aa18.73■□□□□ 0.59
LINC01006-202ENST00000418309 TOMM70O94826 608 aa18.73■□□□□ 0.59
LINC01006-202ENST00000418309 PRR5LQ6MZQ0 368 aa18.73■□□□□ 0.59
LINC01006-202ENST00000418309 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
LINC01006-202ENST00000418309 SBF1O95248 1867 aa18.73■□□□□ 0.59
LINC01006-202ENST00000418309 KDM2BQ8NHM5 1336 aa18.73■□□□□ 0.59
LINC01006-202ENST00000418309 CNBD1Q8NA66 436 aa18.72■□□□□ 0.59
LINC01006-202ENST00000418309 PNNQ9H307 717 aaKnown RBP18.72■□□□□ 0.59
LINC01006-202ENST00000418309 ZNF219Q9P2Y4 722 aaPredicted RBP18.72■□□□□ 0.59
LINC01006-202ENST00000418309 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
LINC01006-202ENST00000418309 DLEC1Q9Y238 1755 aa18.71■□□□□ 0.59
LINC01006-202ENST00000418309 ST5P78524 1137 aa18.71■□□□□ 0.59
LINC01006-202ENST00000418309 ZNF652Q9Y2D9 606 aa18.71■□□□□ 0.59
LINC01006-202ENST00000418309 LMNB1P20700 586 aa18.7■□□□□ 0.58
LINC01006-202ENST00000418309 PNISRQ8TF01 805 aaKnown RBP18.7■□□□□ 0.58
LINC01006-202ENST00000418309 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
LINC01006-202ENST00000418309 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
LINC01006-202ENST00000418309 ANKRD31Q8N7Z5 1873 aa18.69■□□□□ 0.58
LINC01006-202ENST00000418309 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
LINC01006-202ENST00000418309 NFE2L2Q16236 605 aa18.69■□□□□ 0.58
LINC01006-202ENST00000418309 CLEC4GQ6UXB4 293 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms