RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 RNF123Q5XPI4 1314 aa8.95□□□□□ -0.98
CPS1-202ENST00000417946 TNS2Q63HR2 1409 aa8.95□□□□□ -0.98
CPS1-202ENST00000417946 UBR2Q8IWV8 1755 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 ITGB4P16144 1822 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 GNAT3A8MTJ3 354 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 HTATSF1O43719 755 aaKnown RBP8.94□□□□□ -0.98
CPS1-202ENST00000417946 PHKG2P15735 406 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 TATP17735 454 aaPredicted RBP8.94□□□□□ -0.98
CPS1-202ENST00000417946 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 AMOTQ4VCS5 1084 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 PLEKHO1Q53GL0 409 aaPredicted RBP8.94□□□□□ -0.98
CPS1-202ENST00000417946 AKAP4Q5JQC9 854 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 RAPGEF4Q8WZA2 1011 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 C8orf37Q96NL8 207 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 DOT1LQ8TEK3 1739 aa8.94□□□□□ -0.98
CPS1-202ENST00000417946 CHL1O00533 1208 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 NEFMP07197 916 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 IL2RBP14784 551 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 VPS72Q15906 364 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 UNC5CLQ8IV45 518 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 LGR6Q9HBX8 967 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 MBIPQ9NS73 344 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 IFT57Q9NWB7 429 aa8.93□□□□□ -0.98
CPS1-202ENST00000417946 C5P01031 1676 aa8.92□□□□□ -0.98
CPS1-202ENST00000417946 AFF2P51816 1311 aa8.92□□□□□ -0.98
CPS1-202ENST00000417946 RNMTO43148 476 aaKnown RBP8.92□□□□□ -0.98
CPS1-202ENST00000417946 EVA1CP58658 441 aa8.92□□□□□ -0.98
CPS1-202ENST00000417946 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
CPS1-202ENST00000417946 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
CPS1-202ENST00000417946 PCDH11XQ9BZA7 1347 aa8.91□□□□□ -0.98
CPS1-202ENST00000417946 PCDH11YQ9BZA8 1340 aa8.91□□□□□ -0.98
CPS1-202ENST00000417946 EXOSC9Q06265 439 aaKnown RBP8.91□□□□□ -0.98
CPS1-202ENST00000417946 MPRIPQ6WCQ1 1025 aa8.91□□□□□ -0.98
CPS1-202ENST00000417946 BARGINQ6ZT62 677 aa8.91□□□□□ -0.98
CPS1-202ENST00000417946 NGLY1Q96IV0 654 aa8.91□□□□□ -0.98
CPS1-202ENST00000417946 MS4A4AQ96JQ5 239 aa8.91□□□□□ -0.98
CPS1-202ENST00000417946 USP35Q9P2H5 1018 aa8.91□□□□□ -0.98
CPS1-202ENST00000417946 DAXXQ9UER7 740 aaPredicted RBP8.91□□□□□ -0.98
CPS1-202ENST00000417946 BRWD3Q6RI45 1802 aa8.9□□□□□ -0.98
CPS1-202ENST00000417946 GNAI1P63096 354 aa8.9□□□□□ -0.98
CPS1-202ENST00000417946 KRT24Q2M2I5 525 aa8.9□□□□□ -0.98
CPS1-202ENST00000417946 TSPYL6Q8N831 410 aa8.9□□□□□ -0.98
CPS1-202ENST00000417946 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
CPS1-202ENST00000417946 MYH16Q9H6N6 1097 aa8.9□□□□□ -0.98
CPS1-202ENST00000417946 SPG7Q9UQ90 795 aa8.9□□□□□ -0.98
CPS1-202ENST00000417946 THRAP3Q9Y2W1 955 aaKnown RBP8.9□□□□□ -0.98
CPS1-202ENST00000417946 KCPQ6ZWJ8 1503 aa8.9□□□□□ -0.99
CPS1-202ENST00000417946 HEG1Q9ULI3 1381 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 KCNQ3O43525 872 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
CPS1-202ENST00000417946 TPRNQ4KMQ1 711 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 MEX3CQ5U5Q3 659 aaKnown RBP8.89□□□□□ -0.99
CPS1-202ENST00000417946 IFNL2Q8IZJ0 200 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 C8orf58Q8NAV2 365 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 USP21Q9UK80 565 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 RCAN3Q9UKA8 241 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
CPS1-202ENST00000417946 SBF2Q86WG5 1849 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
CPS1-202ENST00000417946 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
CPS1-202ENST00000417946 RTF1Q92541 710 aaKnown RBP8.88□□□□□ -0.99
CPS1-202ENST00000417946 DCAF5Q96JK2 942 aa8.88□□□□□ -0.99
CPS1-202ENST00000417946 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
CPS1-202ENST00000417946 CICQ96RK0 1608 aaPredicted RBP8.87□□□□□ -0.99
CPS1-202ENST00000417946 VAMP4O75379 141 aa8.87□□□□□ -0.99
CPS1-202ENST00000417946 RARSP54136 660 aaKnown RBP8.87□□□□□ -0.99
CPS1-202ENST00000417946 TAF7Q15545 349 aaPredicted RBP8.87□□□□□ -0.99
CPS1-202ENST00000417946 MARCH10Q8NA82 808 aaPredicted RBP8.87□□□□□ -0.99
CPS1-202ENST00000417946 CDCA7Q9BWT1 371 aaPredicted RBP8.87□□□□□ -0.99
CPS1-202ENST00000417946 SLC52A2Q9HAB3 445 aa8.87□□□□□ -0.99
CPS1-202ENST00000417946 LAS1LQ9Y4W2 734 aaKnown RBP8.87□□□□□ -0.99
CPS1-202ENST00000417946 NHSQ6T4R5 1651 aa8.87□□□□□ -0.99
CPS1-202ENST00000417946 CACNA1FO60840 1977 aa8.86□□□□□ -0.99
CPS1-202ENST00000417946 TJP1Q07157 1748 aa8.86□□□□□ -0.99
CPS1-202ENST00000417946 ONECUT3O60422 494 aaPredicted RBP8.86□□□□□ -0.99
CPS1-202ENST00000417946 BCAR3O75815 825 aa8.86□□□□□ -0.99
CPS1-202ENST00000417946 RRP1P56182 461 aaKnown RBP8.86□□□□□ -0.99
CPS1-202ENST00000417946 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
CPS1-202ENST00000417946 VARS2Q5ST30 1063 aaKnown RBP8.86□□□□□ -0.99
CPS1-202ENST00000417946 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
CPS1-202ENST00000417946 GJD4Q96KN9 370 aaPredicted RBP8.86□□□□□ -0.99
CPS1-202ENST00000417946 TSPYL4Q9UJ04 414 aa8.86□□□□□ -0.99
CPS1-202ENST00000417946 BCL9O00512 1426 aa8.86□□□□□ -0.99
CPS1-202ENST00000417946 RGS12O14924 1447 aa8.86□□□□□ -0.99
CPS1-202ENST00000417946 N4BP2Q86UW6 1770 aaPredicted RBP8.86□□□□□ -0.99
CPS1-202ENST00000417946 POTEB3A0JP26 581 aa8.85□□□□□ -0.99
CPS1-202ENST00000417946 HSP90AB1P08238 724 aaKnown RBP8.85□□□□□ -0.99
CPS1-202ENST00000417946 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
CPS1-202ENST00000417946 EIF4A1P60842 406 aaKnown RBP8.85□□□□□ -0.99
CPS1-202ENST00000417946 ZNF772Q68DY9 489 aaPredicted RBP8.85□□□□□ -0.99
CPS1-202ENST00000417946 POTEBQ6S5H4 581 aa8.85□□□□□ -0.99
CPS1-202ENST00000417946 TMEM92Q6UXU6 159 aa8.85□□□□□ -0.99
CPS1-202ENST00000417946 DDX54Q8TDD1 881 aaKnown RBP8.85□□□□□ -0.99
CPS1-202ENST00000417946 SSH1Q8WYL5 1049 aa8.85□□□□□ -0.99
CPS1-202ENST00000417946 MFRPQ9BY79 579 aa8.85□□□□□ -0.99
CPS1-202ENST00000417946 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
CPS1-202ENST00000417946 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
CPS1-202ENST00000417946 RGS17Q9UGC6 210 aaPredicted RBP8.85□□□□□ -0.99
CPS1-202ENST00000417946 TRPC5Q9UL62 973 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms