RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ERBB4Q15303 1308 aa20.93■□□□□ 0.94
SSBP3-205ENST00000417664 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
SSBP3-205ENST00000417664 PDIA6Q15084 440 aa20.93■□□□□ 0.94
SSBP3-205ENST00000417664 DDX54Q8TDD1 881 aaKnown RBP20.93■□□□□ 0.94
SSBP3-205ENST00000417664 CDCA7Q9BWT1 371 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-205ENST00000417664 C5P01031 1676 aa20.93■□□□□ 0.94
SSBP3-205ENST00000417664 ATP8B2P98198 1209 aa20.92■□□□□ 0.94
SSBP3-205ENST00000417664 IPO9Q96P70 1041 aaKnown RBP20.92■□□□□ 0.94
SSBP3-205ENST00000417664 THRAP3Q9Y2W1 955 aaKnown RBP20.92■□□□□ 0.94
SSBP3-205ENST00000417664 ANXA1P04083 346 aa20.91■□□□□ 0.94
SSBP3-205ENST00000417664 PROSER3Q2NL68 480 aa20.91■□□□□ 0.94
SSBP3-205ENST00000417664 PAPPAQ13219 1627 aa20.9■□□□□ 0.94
SSBP3-205ENST00000417664 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
SSBP3-205ENST00000417664 USP35Q9P2H5 1018 aa20.9■□□□□ 0.94
SSBP3-205ENST00000417664 MAP3K2Q9Y2U5 619 aa20.9■□□□□ 0.94
SSBP3-205ENST00000417664 LAMB4A4D0S4 1761 aa20.9■□□□□ 0.94
SSBP3-205ENST00000417664 BMP2KLQ5H9B9 411 aa20.89■□□□□ 0.94
SSBP3-205ENST00000417664 TNS2Q63HR2 1409 aa20.89■□□□□ 0.93
SSBP3-205ENST00000417664 LINS1Q8NG48 757 aa20.89■□□□□ 0.93
SSBP3-205ENST00000417664 USP16Q9Y5T5 823 aa20.88■□□□□ 0.93
SSBP3-205ENST00000417664 LRRFIP2Q9Y608 721 aaKnown RBP20.88■□□□□ 0.93
SSBP3-205ENST00000417664 GLI3P10071 1580 aa20.88■□□□□ 0.93
SSBP3-205ENST00000417664 LRP6O75581 1613 aa20.87■□□□□ 0.93
SSBP3-205ENST00000417664 PIP4K2BP78356 416 aa20.87■□□□□ 0.93
SSBP3-205ENST00000417664 DDRGK1Q96HY6 314 aa20.87■□□□□ 0.93
SSBP3-205ENST00000417664 UPF2Q9HAU5 1272 aaKnown RBP20.87■□□□□ 0.93
SSBP3-205ENST00000417664 TMOD3Q9NYL9 352 aa20.87■□□□□ 0.93
SSBP3-205ENST00000417664 EXOC5O00471 708 aa20.86■□□□□ 0.93
SSBP3-205ENST00000417664 NPM2Q86SE8 214 aaKnown RBP20.86■□□□□ 0.93
SSBP3-205ENST00000417664 NWD2Q9ULI1 1742 aa20.86■□□□□ 0.93
SSBP3-205ENST00000417664 KCPQ6ZWJ8 1503 aa20.86■□□□□ 0.93
SSBP3-205ENST00000417664 UBAP1LF5GYI3 381 aa20.86■□□□□ 0.93
SSBP3-205ENST00000417664 LRP10Q7Z4F1 713 aa20.86■□□□□ 0.93
SSBP3-205ENST00000417664 SSH3Q8TE77 659 aa20.86■□□□□ 0.93
SSBP3-205ENST00000417664 NRAPQ86VF7 1730 aa20.86■□□□□ 0.93
SSBP3-205ENST00000417664 WNK3Q9BYP7 1800 aa20.85■□□□□ 0.93
SSBP3-205ENST00000417664 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
SSBP3-205ENST00000417664 RIC3Q7Z5B4 369 aa20.85■□□□□ 0.93
SSBP3-205ENST00000417664 ADAMTS2O95450 1211 aa20.84■□□□□ 0.93
SSBP3-205ENST00000417664 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
SSBP3-205ENST00000417664 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
SSBP3-205ENST00000417664 UTYO14607 1347 aa20.84■□□□□ 0.93
SSBP3-205ENST00000417664 SPATA31A1Q5TZJ5 1347 aa20.84■□□□□ 0.93
SSBP3-205ENST00000417664 EIF5BO60841 1220 aaKnown RBP20.83■□□□□ 0.93
SSBP3-205ENST00000417664 MYL6BP14649 208 aa20.83■□□□□ 0.93
SSBP3-205ENST00000417664 COPS6Q7L5N1 327 aa20.83■□□□□ 0.93
SSBP3-205ENST00000417664 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
SSBP3-205ENST00000417664 XAGE3Q8WTP9 111 aa20.83■□□□□ 0.93
SSBP3-205ENST00000417664 C9orf78Q9NZ63 289 aaPredicted RBP20.83■□□□□ 0.93
SSBP3-205ENST00000417664 SLIT2O94813 1529 aa20.83■□□□□ 0.93
SSBP3-205ENST00000417664 PNMA6EA0A0J9YXQ4 647 aa20.83■□□□□ 0.92
SSBP3-205ENST00000417664 NBPF7P0C2Y1 421 aaPredicted RBP20.83■□□□□ 0.92
SSBP3-205ENST00000417664 AIMP1Q12904 312 aaKnown RBP20.83■□□□□ 0.92
SSBP3-205ENST00000417664 MTX1Q13505 466 aa20.83■□□□□ 0.92
SSBP3-205ENST00000417664 POLA2Q14181 598 aa20.83■□□□□ 0.92
SSBP3-205ENST00000417664 ANKRD13DQ6ZTN6 518 aa20.83■□□□□ 0.92
SSBP3-205ENST00000417664 PLEKHM2Q8IWE5 1019 aa20.83■□□□□ 0.92
SSBP3-205ENST00000417664 METTL22Q9BUU2 404 aaPredicted RBP20.83■□□□□ 0.92
SSBP3-205ENST00000417664 MSH5O43196 834 aa20.81■□□□□ 0.92
SSBP3-205ENST00000417664 RAB11FIP3O75154 756 aa20.81■□□□□ 0.92
SSBP3-205ENST00000417664 JCADQ9P266 1359 aa20.81■□□□□ 0.92
SSBP3-205ENST00000417664 GRM8O00222 908 aa20.8■□□□□ 0.92
SSBP3-205ENST00000417664 HSP90AB4PQ58FF6 505 aa20.8■□□□□ 0.92
SSBP3-205ENST00000417664 LRRCC1Q9C099 1032 aa20.8■□□□□ 0.92
SSBP3-205ENST00000417664 BARGINQ6ZT62 677 aa20.8■□□□□ 0.92
SSBP3-205ENST00000417664 PPP1R42Q7Z4L9 355 aa20.8■□□□□ 0.92
SSBP3-205ENST00000417664 PLBD2Q8NHP8 589 aa20.8■□□□□ 0.92
SSBP3-205ENST00000417664 SPATA31A5Q5VU36 1347 aa20.79■□□□□ 0.92
SSBP3-205ENST00000417664 SPATA31A7Q8IWB4 1347 aa20.79■□□□□ 0.92
SSBP3-205ENST00000417664 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-205ENST00000417664 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-205ENST00000417664 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-205ENST00000417664 PIGBQ92521 554 aa20.79■□□□□ 0.92
SSBP3-205ENST00000417664 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
SSBP3-205ENST00000417664 BCL9O00512 1426 aa20.79■□□□□ 0.92
SSBP3-205ENST00000417664 SEC24BO95487 1268 aa20.78■□□□□ 0.92
SSBP3-205ENST00000417664 CWF19L2Q2TBE0 894 aaKnown RBP20.78■□□□□ 0.92
SSBP3-205ENST00000417664 NEURL1BA8MQ27 555 aa20.77■□□□□ 0.92
SSBP3-205ENST00000417664 SRGAP3O43295 1099 aa20.77■□□□□ 0.92
SSBP3-205ENST00000417664 PTCD1O75127 700 aaKnown RBP20.77■□□□□ 0.92
SSBP3-205ENST00000417664 IGKV5-2P06315 115 aa20.77■□□□□ 0.92
SSBP3-205ENST00000417664 EXOC6BQ9Y2D4 811 aa20.77■□□□□ 0.92
SSBP3-205ENST00000417664 NOP58Q9Y2X3 529 aaKnown RBP20.77■□□□□ 0.92
SSBP3-205ENST00000417664 ITGB4P16144 1822 aa20.77■□□□□ 0.92
SSBP3-205ENST00000417664 DDB1Q16531 1140 aa20.77■□□□□ 0.91
SSBP3-205ENST00000417664 TTC22Q5TAA0 569 aa20.77■□□□□ 0.91
SSBP3-205ENST00000417664 GCKRQ14397 625 aa20.76■□□□□ 0.91
SSBP3-205ENST00000417664 ATG3Q9NT62 314 aa20.76■□□□□ 0.91
SSBP3-205ENST00000417664 COL15A1P39059 1388 aa20.75■□□□□ 0.91
SSBP3-205ENST00000417664 NBPF26B4DH59 902 aa20.75■□□□□ 0.91
SSBP3-205ENST00000417664 NBPF14Q5TI25 921 aa20.75■□□□□ 0.91
SSBP3-205ENST00000417664 NBPF10Q6P3W6 841 aaKnown RBP20.75■□□□□ 0.91
SSBP3-205ENST00000417664 NBPF15Q8N660 670 aa20.75■□□□□ 0.91
SSBP3-205ENST00000417664 TBC1D32Q96NH3 1257 aa20.75■□□□□ 0.91
SSBP3-205ENST00000417664 SMARCA5O60264 1052 aaPredicted RBP20.74■□□□□ 0.91
SSBP3-205ENST00000417664 STARD3NLO95772 234 aa20.74■□□□□ 0.91
SSBP3-205ENST00000417664 ERICH6Q7L0X2 663 aa20.74■□□□□ 0.91
SSBP3-205ENST00000417664 UNC5CLQ8IV45 518 aa20.74■□□□□ 0.91
SSBP3-205ENST00000417664 C16orf71Q8IYS4 520 aaPredicted RBP20.74■□□□□ 0.91
SSBP3-205ENST00000417664 MYD88Q99836 296 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms