RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CICQ96RK0 1608 aaPredicted RBP30.11■■■□□ 2.41
SMARCB1-205ENST00000417137 ZBTB7AO95365 584 aa30.1■■■□□ 2.41
SMARCB1-205ENST00000417137 GNAI1P63096 354 aa30.1■■■□□ 2.41
SMARCB1-205ENST00000417137 SENP3-EIF4A1A0A087X0R7 540 aa30.09■■■□□ 2.41
SMARCB1-205ENST00000417137 IFT57Q9NWB7 429 aa30.09■■■□□ 2.41
SMARCB1-205ENST00000417137 TJP1Q07157 1748 aa30.08■■■□□ 2.41
SMARCB1-205ENST00000417137 SALL2Q9Y467 1007 aaPredicted RBP30.08■■■□□ 2.41
SMARCB1-205ENST00000417137 USP16Q9Y5T5 823 aa30.08■■■□□ 2.41
SMARCB1-205ENST00000417137 GIGYF1O75420 1035 aaPredicted RBP30.07■■■□□ 2.4
SMARCB1-205ENST00000417137 AMIGO3Q86WK7 504 aa30.07■■■□□ 2.4
SMARCB1-205ENST00000417137 COL5A3P25940 1745 aaPredicted RBP30.07■■■□□ 2.4
SMARCB1-205ENST00000417137 QSER1Q2KHR3 1735 aa30.07■■■□□ 2.4
SMARCB1-205ENST00000417137 RFC4P35249 363 aa30.06■■■□□ 2.4
SMARCB1-205ENST00000417137 ATF5Q9Y2D1 282 aaPredicted RBP30.06■■■□□ 2.4
SMARCB1-205ENST00000417137 ZNF853P0CG23 659 aa30.05■■■□□ 2.4
SMARCB1-205ENST00000417137 CANXP27824 592 aaKnown RBP30.05■■■□□ 2.4
SMARCB1-205ENST00000417137 SMIM5Q71RC9 77 aa30.05■■■□□ 2.4
SMARCB1-205ENST00000417137 NPM2Q86SE8 214 aaKnown RBP30.05■■■□□ 2.4
SMARCB1-205ENST00000417137 ARHGEF1Q92888 912 aaKnown RBP30.05■■■□□ 2.4
SMARCB1-205ENST00000417137 ZBTB1Q9Y2K1 713 aa30.05■■■□□ 2.4
SMARCB1-205ENST00000417137 CASZ1Q86V15 1759 aa30.05■■■□□ 2.4
SMARCB1-205ENST00000417137 PRAMEF22A3QJZ6 481 aa30.04■■■□□ 2.4
SMARCB1-205ENST00000417137 WDR63Q8IWG1 891 aa30.04■■■□□ 2.4
SMARCB1-205ENST00000417137 A1BGP04217 495 aa30.03■■■□□ 2.4
SMARCB1-205ENST00000417137 MBIPQ9NS73 344 aa30.03■■■□□ 2.4
SMARCB1-205ENST00000417137 KDM3BQ7LBC6 1761 aa30.03■■■□□ 2.4
SMARCB1-205ENST00000417137 SOS1Q07889 1333 aaPredicted RBP30.02■■■□□ 2.4
SMARCB1-205ENST00000417137 IL16Q14005 1332 aa30.02■■■□□ 2.4
SMARCB1-205ENST00000417137 A0A087WZG4 1122 aa30.01■■■□□ 2.39
SMARCB1-205ENST00000417137 UBR3Q6ZT12 1888 aa30.01■■■□□ 2.39
SMARCB1-205ENST00000417137 POLD1P28340 1107 aa30■■■□□ 2.39
SMARCB1-205ENST00000417137 IL6STP40189 918 aaPredicted RBP30■■■□□ 2.39
SMARCB1-205ENST00000417137 TUBGCP6Q96RT7 1819 aa30■■■□□ 2.39
SMARCB1-205ENST00000417137 MYH14Q7Z406 1995 aaKnown RBP29.98■■■□□ 2.39
SMARCB1-205ENST00000417137 ZPR1O75312 459 aa29.98■■■□□ 2.39
SMARCB1-205ENST00000417137 EIF5P55010 431 aaKnown RBP29.98■■■□□ 2.39
SMARCB1-205ENST00000417137 PPP1R1BQ9UD71 204 aaPredicted RBP29.97■■■□□ 2.39
SMARCB1-205ENST00000417137 ZNF330Q9Y3S2 320 aaPredicted RBP29.97■■■□□ 2.39
SMARCB1-205ENST00000417137 COL15A1P39059 1388 aa29.96■■■□□ 2.39
SMARCB1-205ENST00000417137 PTGER2P43116 358 aa29.96■■■□□ 2.39
SMARCB1-205ENST00000417137 NLGN1Q8N2Q7 840 aa29.96■■■□□ 2.39
SMARCB1-205ENST00000417137 HOXB7P09629 217 aa29.95■■■□□ 2.39
SMARCB1-205ENST00000417137 MSL1Q68DK7 614 aa29.95■■■□□ 2.39
SMARCB1-205ENST00000417137 EIF2S2P20042 333 aaKnown RBP29.94■■■□□ 2.38
SMARCB1-205ENST00000417137 NARFQ9UHQ1 456 aa29.94■■■□□ 2.38
SMARCB1-205ENST00000417137 ERBB4Q15303 1308 aa29.94■■■□□ 2.38
SMARCB1-205ENST00000417137 SGIP1Q9BQI5 828 aa29.93■■■□□ 2.38
SMARCB1-205ENST00000417137 USP42Q9H9J4 1324 aaKnown RBP29.93■■■□□ 2.38
SMARCB1-205ENST00000417137 DCAF8L1A6NGE4 600 aa29.92■■■□□ 2.38
SMARCB1-205ENST00000417137 DUSP27Q5VZP5 1158 aa29.92■■■□□ 2.38
SMARCB1-205ENST00000417137 ARXQ96QS3 562 aa29.92■■■□□ 2.38
SMARCB1-205ENST00000417137 CHMP4AQ9BY43 222 aa29.92■■■□□ 2.38
SMARCB1-205ENST00000417137 NBPF26B4DH59 902 aa29.91■■■□□ 2.38
SMARCB1-205ENST00000417137 GYS1P13807 737 aa29.91■■■□□ 2.38
SMARCB1-205ENST00000417137 KRT24Q2M2I5 525 aa29.91■■■□□ 2.38
SMARCB1-205ENST00000417137 NBPF10Q6P3W6 841 aaKnown RBP29.91■■■□□ 2.38
SMARCB1-205ENST00000417137 NBPF15Q8N660 670 aa29.91■■■□□ 2.38
SMARCB1-205ENST00000417137 YY1P25490 414 aa29.9■■■□□ 2.38
SMARCB1-205ENST00000417137 PIP4K2AP48426 406 aaPredicted RBP29.9■■■□□ 2.38
SMARCB1-205ENST00000417137 MYH16Q9H6N6 1097 aa29.9■■■□□ 2.38
SMARCB1-205ENST00000417137 SRP68Q9UHB9 627 aaKnown RBP29.9■■■□□ 2.38
SMARCB1-205ENST00000417137 USPL1Q5W0Q7 1092 aa29.89■■■□□ 2.38
SMARCB1-205ENST00000417137 TSR2Q969E8 191 aaKnown RBP29.89■■■□□ 2.38
SMARCB1-205ENST00000417137 GOLGA2Q08379 1002 aa29.88■■■□□ 2.37
SMARCB1-205ENST00000417137 TBC1D2BQ9UPU7 963 aa29.88■■■□□ 2.37
SMARCB1-205ENST00000417137 HDGFL1Q5TGJ6 251 aa29.87■■■□□ 2.37
SMARCB1-205ENST00000417137 DZIP3Q86Y13 1208 aaKnown RBP29.87■■■□□ 2.37
SMARCB1-205ENST00000417137 ZNF521Q96K83 1311 aa29.87■■■□□ 2.37
SMARCB1-205ENST00000417137 MYL6BP14649 208 aa29.86■■■□□ 2.37
SMARCB1-205ENST00000417137 ELL2O00472 640 aaPredicted RBP29.85■■■□□ 2.37
SMARCB1-205ENST00000417137 C8orf58Q8NAV2 365 aa29.85■■■□□ 2.37
SMARCB1-205ENST00000417137 NECTIN2Q92692 538 aa29.85■■■□□ 2.37
SMARCB1-205ENST00000417137 FKBP8Q14318 412 aa29.84■■■□□ 2.37
SMARCB1-205ENST00000417137 LAMB4A4D0S4 1761 aa29.84■■■□□ 2.37
SMARCB1-205ENST00000417137 FANCIQ9NVI1 1328 aa29.83■■■□□ 2.37
SMARCB1-205ENST00000417137 MMP10P09238 476 aa29.83■■■□□ 2.37
SMARCB1-205ENST00000417137 DDX21Q9NR30 783 aaKnown RBP eCLIP29.83■■■□□ 2.37
SMARCB1-205ENST00000417137 PDIA6Q15084 440 aa29.82■■■□□ 2.36
SMARCB1-205ENST00000417137 DBF4Q9UBU7 674 aaPredicted RBP29.82■■■□□ 2.36
SMARCB1-205ENST00000417137 PARP3Q9Y6F1 533 aa29.82■■■□□ 2.36
SMARCB1-205ENST00000417137 CAMTA2O94983 1202 aa29.81■■■□□ 2.36
SMARCB1-205ENST00000417137 ZNF652Q9Y2D9 606 aa29.81■■■□□ 2.36
SMARCB1-205ENST00000417137 E9PSI1 815 aa29.8■■■□□ 2.36
SMARCB1-205ENST00000417137 RGL2O15211 777 aa29.8■■■□□ 2.36
SMARCB1-205ENST00000417137 CLEC4GQ6UXB4 293 aa29.8■■■□□ 2.36
SMARCB1-205ENST00000417137 KIF6Q6ZMV9 814 aa29.8■■■□□ 2.36
SMARCB1-205ENST00000417137 BCL2L12Q9HB09 334 aa29.8■■■□□ 2.36
SMARCB1-205ENST00000417137 SPINK5Q9NQ38 1064 aaPredicted RBP29.8■■■□□ 2.36
SMARCB1-205ENST00000417137 C4AP0C0L4 1744 aa29.79■■■□□ 2.36
SMARCB1-205ENST00000417137 TWISTNBQ3B726 338 aaPredicted RBP29.79■■■□□ 2.36
SMARCB1-205ENST00000417137 CCDC30Q5VVM6 783 aa29.79■■■□□ 2.36
SMARCB1-205ENST00000417137 COL24A1Q17RW2 1714 aa29.79■■■□□ 2.36
SMARCB1-205ENST00000417137 TM4SF1P30408 202 aa29.78■■■□□ 2.36
SMARCB1-205ENST00000417137 TSPYL6Q8N831 410 aa29.78■■■□□ 2.36
SMARCB1-205ENST00000417137 CHPF2Q9P2E5 772 aa29.78■■■□□ 2.36
SMARCB1-205ENST00000417137 ERVV-1B6SEH8 477 aa29.77■■■□□ 2.36
SMARCB1-205ENST00000417137 HYPKQ9NX55 129 aa29.77■■■□□ 2.36
SMARCB1-205ENST00000417137 EXOSC9Q06265 439 aaKnown RBP29.76■■■□□ 2.35
SMARCB1-205ENST00000417137 PROSER3Q2NL68 480 aa29.76■■■□□ 2.35
SMARCB1-205ENST00000417137 FHDC1Q9C0D6 1143 aaPredicted RBP29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms