RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
PTPN6-203ENST00000416215 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
PTPN6-203ENST00000416215 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPN6-203ENST00000416215 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
PTPN6-203ENST00000416215 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
PTPN6-203ENST00000416215 EVA1CP58658 441 aa16.72■□□□□ 0.27
PTPN6-203ENST00000416215 KSR2Q6VAB6 950 aa16.72■□□□□ 0.27
PTPN6-203ENST00000416215 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
PTPN6-203ENST00000416215 MYL6BP14649 208 aa16.72■□□□□ 0.27
PTPN6-203ENST00000416215 ABCA3Q99758 1704 aa16.72■□□□□ 0.27
PTPN6-203ENST00000416215 TTC5Q8N0Z6 440 aa16.71■□□□□ 0.27
PTPN6-203ENST00000416215 CARD10Q9BWT7 1032 aa16.71■□□□□ 0.27
PTPN6-203ENST00000416215 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.27
PTPN6-203ENST00000416215 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
PTPN6-203ENST00000416215 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
PTPN6-203ENST00000416215 CWF19L2Q2TBE0 894 aaKnown RBP16.7■□□□□ 0.26
PTPN6-203ENST00000416215 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
PTPN6-203ENST00000416215 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
PTPN6-203ENST00000416215 C5P01031 1676 aa16.7■□□□□ 0.26
PTPN6-203ENST00000416215 IL2RBP14784 551 aa16.7■□□□□ 0.26
PTPN6-203ENST00000416215 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
PTPN6-203ENST00000416215 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
PTPN6-203ENST00000416215 LRRCC1Q9C099 1032 aa16.7■□□□□ 0.26
PTPN6-203ENST00000416215 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
PTPN6-203ENST00000416215 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
PTPN6-203ENST00000416215 MRC1P22897 1456 aa16.69■□□□□ 0.26
PTPN6-203ENST00000416215 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
PTPN6-203ENST00000416215 CDC45O75419 566 aa16.69■□□□□ 0.26
PTPN6-203ENST00000416215 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
PTPN6-203ENST00000416215 SDSP20132 328 aa16.69■□□□□ 0.26
PTPN6-203ENST00000416215 BECN1Q14457 450 aa16.69■□□□□ 0.26
PTPN6-203ENST00000416215 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
PTPN6-203ENST00000416215 TSHZ3Q63HK5 1081 aa16.68■□□□□ 0.26
PTPN6-203ENST00000416215 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
PTPN6-203ENST00000416215 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
PTPN6-203ENST00000416215 PDE1AP54750 535 aa16.68■□□□□ 0.26
PTPN6-203ENST00000416215 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
PTPN6-203ENST00000416215 POLA2Q14181 598 aa16.67■□□□□ 0.26
PTPN6-203ENST00000416215 COPS6Q7L5N1 327 aa16.67■□□□□ 0.26
PTPN6-203ENST00000416215 XAGE3Q8WTP9 111 aa16.67■□□□□ 0.26
PTPN6-203ENST00000416215 PARP4Q9UKK3 1724 aaKnown RBP16.67■□□□□ 0.26
PTPN6-203ENST00000416215 SURF6O75683 361 aaKnown RBP16.67■□□□□ 0.26
PTPN6-203ENST00000416215 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
PTPN6-203ENST00000416215 DDX58O95786 925 aaKnown RBP16.67■□□□□ 0.26
PTPN6-203ENST00000416215 PRKCSHP14314 528 aaPredicted RBP16.67■□□□□ 0.26
PTPN6-203ENST00000416215 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
PTPN6-203ENST00000416215 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
PTPN6-203ENST00000416215 BTG4Q9NY30 223 aa16.67■□□□□ 0.26
PTPN6-203ENST00000416215 LINS1Q8NG48 757 aa16.66■□□□□ 0.26
PTPN6-203ENST00000416215 OSBPL3Q9H4L5 887 aa16.66■□□□□ 0.26
PTPN6-203ENST00000416215 IL1RAPL2Q9NP60 686 aa16.66■□□□□ 0.26
PTPN6-203ENST00000416215 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
PTPN6-203ENST00000416215 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
PTPN6-203ENST00000416215 ERVV-2B6SEH9 535 aa16.64■□□□□ 0.25
PTPN6-203ENST00000416215 IGKV5-2P06315 115 aa16.64■□□□□ 0.25
PTPN6-203ENST00000416215 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
PTPN6-203ENST00000416215 MX1P20591 662 aa16.63■□□□□ 0.25
PTPN6-203ENST00000416215 GRM8O00222 908 aa16.62■□□□□ 0.25
PTPN6-203ENST00000416215 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
PTPN6-203ENST00000416215 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
PTPN6-203ENST00000416215 NUTM1Q86Y26 1132 aa16.62■□□□□ 0.25
PTPN6-203ENST00000416215 RHPN1Q8TCX5 695 aa16.62■□□□□ 0.25
PTPN6-203ENST00000416215 KIF2CQ99661 725 aa16.62■□□□□ 0.25
PTPN6-203ENST00000416215 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
PTPN6-203ENST00000416215 PTCD1O75127 700 aaKnown RBP16.61■□□□□ 0.25
PTPN6-203ENST00000416215 RAB11FIP3O75154 756 aa16.61■□□□□ 0.25
PTPN6-203ENST00000416215 KAZALD1Q96I82 304 aa16.61■□□□□ 0.25
PTPN6-203ENST00000416215 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
PTPN6-203ENST00000416215 MYD88Q99836 296 aa16.61■□□□□ 0.25
PTPN6-203ENST00000416215 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
PTPN6-203ENST00000416215 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
PTPN6-203ENST00000416215 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
PTPN6-203ENST00000416215 MTX1Q13505 466 aa16.6■□□□□ 0.25
PTPN6-203ENST00000416215 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
PTPN6-203ENST00000416215 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
PTPN6-203ENST00000416215 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
PTPN6-203ENST00000416215 UTYO14607 1347 aa16.59■□□□□ 0.25
PTPN6-203ENST00000416215 NBPF26B4DH59 902 aa16.59■□□□□ 0.25
PTPN6-203ENST00000416215 NBPF14Q5TI25 921 aa16.59■□□□□ 0.25
PTPN6-203ENST00000416215 NBPF10Q6P3W6 841 aaKnown RBP16.59■□□□□ 0.25
PTPN6-203ENST00000416215 NBPF15Q8N660 670 aa16.59■□□□□ 0.25
PTPN6-203ENST00000416215 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
PTPN6-203ENST00000416215 BICC1Q9H694 974 aaKnown RBP16.59■□□□□ 0.25
PTPN6-203ENST00000416215 STAP2Q9UGK3 403 aa16.59■□□□□ 0.25
PTPN6-203ENST00000416215 GLI3P10071 1580 aa16.59■□□□□ 0.25
PTPN6-203ENST00000416215 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
PTPN6-203ENST00000416215 GCKRQ14397 625 aa16.58■□□□□ 0.25
PTPN6-203ENST00000416215 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.25
PTPN6-203ENST00000416215 A1BGP04217 495 aa16.58■□□□□ 0.24
PTPN6-203ENST00000416215 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.24
PTPN6-203ENST00000416215 NFKBIBQ15653 356 aa16.58■□□□□ 0.24
PTPN6-203ENST00000416215 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
PTPN6-203ENST00000416215 USP26Q9BXU7 913 aa16.58■□□□□ 0.24
PTPN6-203ENST00000416215 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
PTPN6-203ENST00000416215 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
PTPN6-203ENST00000416215 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
PTPN6-203ENST00000416215 TRIM6-TRIM34B2RNG4 842 aa16.57■□□□□ 0.24
PTPN6-203ENST00000416215 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
PTPN6-203ENST00000416215 UNC5CLQ8IV45 518 aa16.57■□□□□ 0.24
PTPN6-203ENST00000416215 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms