RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 KRT24Q2M2I5 525 aa16.48■□□□□ 0.23
HNF4A-204ENST00000415691 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
HNF4A-204ENST00000415691 SLC39A6Q13433 755 aa16.48■□□□□ 0.23
HNF4A-204ENST00000415691 CLUAP1Q96AJ1 413 aa16.48■□□□□ 0.23
HNF4A-204ENST00000415691 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
HNF4A-204ENST00000415691 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
HNF4A-204ENST00000415691 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
HNF4A-204ENST00000415691 SYTL4Q96C24 671 aaPredicted RBP16.47■□□□□ 0.23
HNF4A-204ENST00000415691 ERBB4Q15303 1308 aa16.46■□□□□ 0.23
HNF4A-204ENST00000415691 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
HNF4A-204ENST00000415691 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
HNF4A-204ENST00000415691 C8orf58Q8NAV2 365 aa16.46■□□□□ 0.23
HNF4A-204ENST00000415691 KCNQ2O43526 872 aa16.46■□□□□ 0.23
HNF4A-204ENST00000415691 PIGBQ92521 554 aa16.46■□□□□ 0.23
HNF4A-204ENST00000415691 TRIM44Q96DX7 344 aaPredicted RBP16.46■□□□□ 0.23
HNF4A-204ENST00000415691 SCN11AQ9UI33 1791 aa16.45■□□□□ 0.22
HNF4A-204ENST00000415691 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
HNF4A-204ENST00000415691 PTF1AQ7RTS3 328 aa16.45■□□□□ 0.22
HNF4A-204ENST00000415691 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
HNF4A-204ENST00000415691 MAP7D2Q96T17 732 aa16.44■□□□□ 0.22
HNF4A-204ENST00000415691 TMOD3Q9NYL9 352 aa16.44■□□□□ 0.22
HNF4A-204ENST00000415691 TOGARAM1Q9Y4F4 1720 aa16.43■□□□□ 0.22
HNF4A-204ENST00000415691 PTMSP20962 102 aa16.43■□□□□ 0.22
HNF4A-204ENST00000415691 GZF1Q9H116 711 aaPredicted RBP16.43■□□□□ 0.22
HNF4A-204ENST00000415691 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
HNF4A-204ENST00000415691 EIF4A1P60842 406 aaKnown RBP16.42■□□□□ 0.22
HNF4A-204ENST00000415691 ZNF790Q6PG37 636 aa16.42■□□□□ 0.22
HNF4A-204ENST00000415691 ASAP1Q9ULH1 1129 aa16.42■□□□□ 0.22
HNF4A-204ENST00000415691 MRC1P22897 1456 aa16.42■□□□□ 0.22
HNF4A-204ENST00000415691 VAMP4O75379 141 aa16.41■□□□□ 0.22
HNF4A-204ENST00000415691 ARXQ96QS3 562 aa16.41■□□□□ 0.22
HNF4A-204ENST00000415691 RGS12O14924 1447 aa16.4■□□□□ 0.22
HNF4A-204ENST00000415691 ATG3Q9NT62 314 aa16.4■□□□□ 0.22
HNF4A-204ENST00000415691 SIPA1L3O60292 1781 aaPredicted RBP16.4■□□□□ 0.22
HNF4A-204ENST00000415691 PRAMEF22A3QJZ6 481 aa16.4■□□□□ 0.22
HNF4A-204ENST00000415691 BCAR3O75815 825 aa16.4■□□□□ 0.22
HNF4A-204ENST00000415691 SKOR2Q2VWA4 1001 aaPredicted RBP16.4■□□□□ 0.22
HNF4A-204ENST00000415691 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
HNF4A-204ENST00000415691 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
HNF4A-204ENST00000415691 BCL9O00512 1426 aa16.39■□□□□ 0.21
HNF4A-204ENST00000415691 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.21
HNF4A-204ENST00000415691 PRDM4Q9UKN5 801 aa16.39■□□□□ 0.21
HNF4A-204ENST00000415691 BRWD3Q6RI45 1802 aa16.39■□□□□ 0.21
HNF4A-204ENST00000415691 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
HNF4A-204ENST00000415691 OFD1O75665 1012 aa16.38■□□□□ 0.21
HNF4A-204ENST00000415691 DDIT3P35638 169 aa16.38■□□□□ 0.21
HNF4A-204ENST00000415691 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
HNF4A-204ENST00000415691 TTC5Q8N0Z6 440 aa16.38■□□□□ 0.21
HNF4A-204ENST00000415691 PPP1R9BQ96SB3 815 aa16.38■□□□□ 0.21
HNF4A-204ENST00000415691 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
HNF4A-204ENST00000415691 KIAA1211Q6ZU35 1233 aa16.37■□□□□ 0.21
HNF4A-204ENST00000415691 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
HNF4A-204ENST00000415691 BCL2L13Q9BXK5 485 aa16.37■□□□□ 0.21
HNF4A-204ENST00000415691 CIZ1Q9ULV3 898 aaPredicted RBP16.37■□□□□ 0.21
HNF4A-204ENST00000415691 EP400Q96L91 3159 aa16.37■□□□□ 0.21
HNF4A-204ENST00000415691 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
HNF4A-204ENST00000415691 ITGB4P16144 1822 aa16.37■□□□□ 0.21
HNF4A-204ENST00000415691 RARSP54136 660 aaKnown RBP16.36■□□□□ 0.21
HNF4A-204ENST00000415691 KDM3BQ7LBC6 1761 aa16.36■□□□□ 0.21
HNF4A-204ENST00000415691 GIGYF1O75420 1035 aaPredicted RBP16.36■□□□□ 0.21
HNF4A-204ENST00000415691 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
HNF4A-204ENST00000415691 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
HNF4A-204ENST00000415691 ZSCAN30Q86W11 494 aa16.35■□□□□ 0.21
HNF4A-204ENST00000415691 SSH1Q8WYL5 1049 aa16.35■□□□□ 0.21
HNF4A-204ENST00000415691 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
HNF4A-204ENST00000415691 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
HNF4A-204ENST00000415691 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
HNF4A-204ENST00000415691 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
HNF4A-204ENST00000415691 TRIM37O94972 964 aa16.34■□□□□ 0.21
HNF4A-204ENST00000415691 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
HNF4A-204ENST00000415691 USP16Q9Y5T5 823 aa16.34■□□□□ 0.21
HNF4A-204ENST00000415691 MTERF4Q7Z6M4 381 aaKnown RBP16.34■□□□□ 0.21
HNF4A-204ENST00000415691 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
HNF4A-204ENST00000415691 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
HNF4A-204ENST00000415691 HS1BP3Q53T59 392 aa16.33■□□□□ 0.2
HNF4A-204ENST00000415691 HSCBQ8IWL3 235 aa16.33■□□□□ 0.2
HNF4A-204ENST00000415691 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
HNF4A-204ENST00000415691 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
HNF4A-204ENST00000415691 COG6Q9Y2V7 657 aa16.33■□□□□ 0.2
HNF4A-204ENST00000415691 SNX21Q969T3 373 aa16.32■□□□□ 0.2
HNF4A-204ENST00000415691 RWDD1Q9H446 243 aaPredicted RBP16.32■□□□□ 0.2
HNF4A-204ENST00000415691 KCPQ6ZWJ8 1503 aa16.32■□□□□ 0.2
HNF4A-204ENST00000415691 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
HNF4A-204ENST00000415691 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
HNF4A-204ENST00000415691 KCNQ4P56696 695 aa16.31■□□□□ 0.2
HNF4A-204ENST00000415691 HDGFL1Q5TGJ6 251 aa16.31■□□□□ 0.2
HNF4A-204ENST00000415691 GAS2L3Q86XJ1 694 aa16.31■□□□□ 0.2
HNF4A-204ENST00000415691 SMC5Q8IY18 1101 aa16.31■□□□□ 0.2
HNF4A-204ENST00000415691 SMC4Q9NTJ3 1288 aa16.31■□□□□ 0.2
HNF4A-204ENST00000415691 CANXP27824 592 aaKnown RBP16.3■□□□□ 0.2
HNF4A-204ENST00000415691 SMAP1Q8IYB5 467 aaPredicted RBP16.3■□□□□ 0.2
HNF4A-204ENST00000415691 MRPL50Q8N5N7 158 aaKnown RBP16.3■□□□□ 0.2
HNF4A-204ENST00000415691 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
HNF4A-204ENST00000415691 PAPPAQ13219 1627 aa16.29■□□□□ 0.2
HNF4A-204ENST00000415691 ANXA1P04083 346 aa16.29■□□□□ 0.2
HNF4A-204ENST00000415691 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
HNF4A-204ENST00000415691 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
HNF4A-204ENST00000415691 PALLDQ8WX93 1383 aa16.29■□□□□ 0.2
HNF4A-204ENST00000415691 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
HNF4A-204ENST00000415691 ALDH1L2Q3SY69 923 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms