RNA–Protein interactions for RNA: ENST00000415314.6

GPATCH4-202, Transcript of G-patch domain containing 4, humanhuman

APPRIS ALT2 TSL 3

Gene GPATCH4, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-202ENST00000415314 YY1P25490 414 aa17.43■□□□□ 0.38
GPATCH4-202ENST00000415314 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
GPATCH4-202ENST00000415314 CHD4Q14839 1912 aa17.43■□□□□ 0.38
GPATCH4-202ENST00000415314 GYS1P13807 737 aa17.42■□□□□ 0.38
GPATCH4-202ENST00000415314 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
GPATCH4-202ENST00000415314 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
GPATCH4-202ENST00000415314 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
GPATCH4-202ENST00000415314 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
GPATCH4-202ENST00000415314 C4AP0C0L4 1744 aa17.41■□□□□ 0.38
GPATCH4-202ENST00000415314 HEG1Q9ULI3 1381 aa17.4■□□□□ 0.38
GPATCH4-202ENST00000415314 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
GPATCH4-202ENST00000415314 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
GPATCH4-202ENST00000415314 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
GPATCH4-202ENST00000415314 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
GPATCH4-202ENST00000415314 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
GPATCH4-202ENST00000415314 ZBTB1Q9Y2K1 713 aa17.39■□□□□ 0.37
GPATCH4-202ENST00000415314 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
GPATCH4-202ENST00000415314 USP42Q9H9J4 1324 aaKnown RBP17.39■□□□□ 0.37
GPATCH4-202ENST00000415314 UTRNP46939 3433 aa17.38■□□□□ 0.37
GPATCH4-202ENST00000415314 KCNQ3O43525 872 aa17.38■□□□□ 0.37
GPATCH4-202ENST00000415314 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
GPATCH4-202ENST00000415314 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
GPATCH4-202ENST00000415314 A0A087WZG4 1122 aa17.37■□□□□ 0.37
GPATCH4-202ENST00000415314 GRIN3BO60391 1043 aa17.37■□□□□ 0.37
GPATCH4-202ENST00000415314 FKBP8Q14318 412 aa17.37■□□□□ 0.37
GPATCH4-202ENST00000415314 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
GPATCH4-202ENST00000415314 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
GPATCH4-202ENST00000415314 NARFQ9UHQ1 456 aa17.37■□□□□ 0.37
GPATCH4-202ENST00000415314 GOLGB1Q14789 3259 aaKnown RBP17.37■□□□□ 0.37
GPATCH4-202ENST00000415314 SNRPA1P09661 255 aaKnown RBP17.36■□□□□ 0.37
GPATCH4-202ENST00000415314 ZNF330Q9Y3S2 320 aaPredicted RBP17.36■□□□□ 0.37
GPATCH4-202ENST00000415314 COL15A1P39059 1388 aa17.36■□□□□ 0.37
GPATCH4-202ENST00000415314 RIPK4P57078 832 aa17.35■□□□□ 0.37
GPATCH4-202ENST00000415314 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
GPATCH4-202ENST00000415314 A1BGP04217 495 aa17.34■□□□□ 0.37
GPATCH4-202ENST00000415314 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
GPATCH4-202ENST00000415314 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
GPATCH4-202ENST00000415314 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.36
GPATCH4-202ENST00000415314 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
GPATCH4-202ENST00000415314 TGFB2P61812 414 aa17.33■□□□□ 0.36
GPATCH4-202ENST00000415314 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.36
GPATCH4-202ENST00000415314 USP16Q9Y5T5 823 aa17.33■□□□□ 0.36
GPATCH4-202ENST00000415314 TM4SF1P30408 202 aa17.32■□□□□ 0.36
GPATCH4-202ENST00000415314 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
GPATCH4-202ENST00000415314 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
GPATCH4-202ENST00000415314 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
GPATCH4-202ENST00000415314 KIF13BQ9NQT8 1826 aa17.32■□□□□ 0.36
GPATCH4-202ENST00000415314 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
GPATCH4-202ENST00000415314 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
GPATCH4-202ENST00000415314 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
GPATCH4-202ENST00000415314 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
GPATCH4-202ENST00000415314 DDR1Q08345 913 aa17.3■□□□□ 0.36
GPATCH4-202ENST00000415314 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
GPATCH4-202ENST00000415314 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
GPATCH4-202ENST00000415314 A0A0G2JLW4 131 aa17.29■□□□□ 0.36
GPATCH4-202ENST00000415314 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
GPATCH4-202ENST00000415314 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
GPATCH4-202ENST00000415314 NFIXQ14938 502 aa17.29■□□□□ 0.36
GPATCH4-202ENST00000415314 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
GPATCH4-202ENST00000415314 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
GPATCH4-202ENST00000415314 RRP7AQ9Y3A4 280 aaKnown RBP17.28■□□□□ 0.36
GPATCH4-202ENST00000415314 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
GPATCH4-202ENST00000415314 AFDNP55196 1824 aaKnown RBP17.27■□□□□ 0.36
GPATCH4-202ENST00000415314 SERPINB2P05120 415 aa17.27■□□□□ 0.36
GPATCH4-202ENST00000415314 DPEP1P16444 411 aa17.27■□□□□ 0.36
GPATCH4-202ENST00000415314 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
GPATCH4-202ENST00000415314 DZIP3Q86Y13 1208 aaKnown RBP17.27■□□□□ 0.36
GPATCH4-202ENST00000415314 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
GPATCH4-202ENST00000415314 KDM3BQ7LBC6 1761 aa17.27■□□□□ 0.35
GPATCH4-202ENST00000415314 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
GPATCH4-202ENST00000415314 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
GPATCH4-202ENST00000415314 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
GPATCH4-202ENST00000415314 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
GPATCH4-202ENST00000415314 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
GPATCH4-202ENST00000415314 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
GPATCH4-202ENST00000415314 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
GPATCH4-202ENST00000415314 NPHP1O15259 732 aa17.24■□□□□ 0.35
GPATCH4-202ENST00000415314 ANP32CO43423 234 aa17.24■□□□□ 0.35
GPATCH4-202ENST00000415314 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
GPATCH4-202ENST00000415314 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
GPATCH4-202ENST00000415314 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 ZBTB22O15209 634 aa17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 ZNF784Q8NCA9 323 aaPredicted RBP17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
GPATCH4-202ENST00000415314 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
GPATCH4-202ENST00000415314 CLEC4GQ6UXB4 293 aa17.22■□□□□ 0.35
GPATCH4-202ENST00000415314 BRCA1P38398 1863 aaKnown RBP17.21■□□□□ 0.35
GPATCH4-202ENST00000415314 SCN7AQ01118 1682 aa17.21■□□□□ 0.35
GPATCH4-202ENST00000415314 KCNA3P22001 575 aa17.21■□□□□ 0.35
GPATCH4-202ENST00000415314 CHRNA5P30532 468 aa17.21■□□□□ 0.35
GPATCH4-202ENST00000415314 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
GPATCH4-202ENST00000415314 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
GPATCH4-202ENST00000415314 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
GPATCH4-202ENST00000415314 CARMIL3Q8ND23 1372 aa17.2■□□□□ 0.34
GPATCH4-202ENST00000415314 ARHGAP27Q6ZUM4 889 aa17.2■□□□□ 0.34
GPATCH4-202ENST00000415314 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms