RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 NBPF14Q5TI25 921 aa39.68■■■■□ 3.94
CSNK1E-206ENST00000413574 TEX13AQ9BXU3 409 aaPredicted RBP39.68■■■■□ 3.94
CSNK1E-206ENST00000413574 E9PSI1 815 aa39.66■■■■□ 3.94
CSNK1E-206ENST00000413574 STARD3NLO95772 234 aa39.66■■■■□ 3.94
CSNK1E-206ENST00000413574 SLC15A2Q16348 729 aa39.66■■■■□ 3.94
CSNK1E-206ENST00000413574 SMIM5Q71RC9 77 aa39.66■■■■□ 3.94
CSNK1E-206ENST00000413574 STK32BQ9NY57 414 aa39.66■■■■□ 3.94
CSNK1E-206ENST00000413574 INTS5Q6P9B9 1019 aaKnown RBP39.65■■■■□ 3.94
CSNK1E-206ENST00000413574 AK7Q96M32 723 aa39.65■■■■□ 3.94
CSNK1E-206ENST00000413574 UBR3Q6ZT12 1888 aa39.65■■■■□ 3.94
CSNK1E-206ENST00000413574 DUSP27Q5VZP5 1158 aa39.65■■■■□ 3.94
CSNK1E-206ENST00000413574 AMIGO3Q86WK7 504 aa39.65■■■■□ 3.94
CSNK1E-206ENST00000413574 TSPYL6Q8N831 410 aa39.65■■■■□ 3.94
CSNK1E-206ENST00000413574 CNTNAP4Q9C0A0 1308 aa39.65■■■■□ 3.94
CSNK1E-206ENST00000413574 A1BGP04217 495 aa39.63■■■■□ 3.93
CSNK1E-206ENST00000413574 GNPATO15228 680 aa39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 EXOSC9Q06265 439 aaKnown RBP39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 RC3H1Q5TC82 1133 aaKnown RBP39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 CCDC87Q9NVE4 849 aa39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 TFCP2L1Q9NZI6 479 aa39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 EIF2S2P20042 333 aaKnown RBP39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 PIP4K2AP48426 406 aaPredicted RBP39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 NECTIN2Q92692 538 aa39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 ZBTB1Q9Y2K1 713 aa39.62■■■■□ 3.93
CSNK1E-206ENST00000413574 R3HDM1Q15032 1099 aaKnown RBP39.6■■■■□ 3.93
CSNK1E-206ENST00000413574 HMGB2P26583 209 aaKnown RBP39.59■■■■□ 3.93
CSNK1E-206ENST00000413574 CANXP27824 592 aaKnown RBP39.58■■■■□ 3.93
CSNK1E-206ENST00000413574 TRMT2AQ8IZ69 625 aaKnown RBP39.58■■■■□ 3.93
CSNK1E-206ENST00000413574 PSDA5PKW4 1024 aaPredicted RBP39.58■■■■□ 3.93
CSNK1E-206ENST00000413574 PHF14O94880 888 aa39.56■■■■□ 3.92
CSNK1E-206ENST00000413574 TWISTNBQ3B726 338 aaPredicted RBP39.55■■■■□ 3.92
CSNK1E-206ENST00000413574 QSER1Q2KHR3 1735 aa39.55■■■■□ 3.92
CSNK1E-206ENST00000413574 HOXB7P09629 217 aa39.54■■■■□ 3.92
CSNK1E-206ENST00000413574 NBPF26B4DH59 902 aa39.54■■■■□ 3.92
CSNK1E-206ENST00000413574 RPS6KA4O75676 772 aa39.54■■■■□ 3.92
CSNK1E-206ENST00000413574 NBPF10Q6P3W6 841 aaKnown RBP39.54■■■■□ 3.92
CSNK1E-206ENST00000413574 NBPF15Q8N660 670 aa39.54■■■■□ 3.92
CSNK1E-206ENST00000413574 RTCBQ9Y3I0 505 aaKnown RBP39.54■■■■□ 3.92
CSNK1E-206ENST00000413574 PNPLA7Q6ZV29 1317 aa39.53■■■■□ 3.92
CSNK1E-206ENST00000413574 HDGFL1Q5TGJ6 251 aa39.53■■■■□ 3.92
CSNK1E-206ENST00000413574 PDGFDQ9GZP0 370 aaPredicted RBP39.53■■■■□ 3.92
CSNK1E-206ENST00000413574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP39.51■■■■□ 3.92
CSNK1E-206ENST00000413574 ZNF330Q9Y3S2 320 aaPredicted RBP39.51■■■■□ 3.91
CSNK1E-206ENST00000413574 SOS1Q07889 1333 aaPredicted RBP39.5■■■■□ 3.91
CSNK1E-206ENST00000413574 VAMP4O75379 141 aa39.48■■■■□ 3.91
CSNK1E-206ENST00000413574 ANXA1P04083 346 aa39.48■■■■□ 3.91
CSNK1E-206ENST00000413574 MYL6BP14649 208 aa39.48■■■■□ 3.91
CSNK1E-206ENST00000413574 COL23A1Q86Y22 540 aaPredicted RBP39.48■■■■□ 3.91
CSNK1E-206ENST00000413574 SSFA2P28290 1259 aa39.47■■■■□ 3.91
CSNK1E-206ENST00000413574 PDIA6Q15084 440 aa39.47■■■■□ 3.91
CSNK1E-206ENST00000413574 PROSER3Q2NL68 480 aa39.47■■■■□ 3.91
CSNK1E-206ENST00000413574 C4AP0C0L4 1744 aa39.47■■■■□ 3.91
CSNK1E-206ENST00000413574 TCERG1O14776 1098 aaKnown RBP39.46■■■■□ 3.91
CSNK1E-206ENST00000413574 EIF5P55010 431 aaKnown RBP39.46■■■■□ 3.91
CSNK1E-206ENST00000413574 ARHGEF1Q92888 912 aaKnown RBP39.46■■■■□ 3.91
CSNK1E-206ENST00000413574 CHPF2Q9P2E5 772 aa39.46■■■■□ 3.91
CSNK1E-206ENST00000413574 IL6STP40189 918 aaPredicted RBP39.45■■■■□ 3.91
CSNK1E-206ENST00000413574 TRAPPC3LQ5T215 181 aa39.45■■■■□ 3.91
CSNK1E-206ENST00000413574 MSH5O43196 834 aa39.44■■■■□ 3.9
CSNK1E-206ENST00000413574 COL15A1P39059 1388 aa39.44■■■■□ 3.9
CSNK1E-206ENST00000413574 CASZ1Q86V15 1759 aa39.43■■■■□ 3.9
CSNK1E-206ENST00000413574 ERBB4Q15303 1308 aa39.42■■■■□ 3.9
CSNK1E-206ENST00000413574 FLAD1Q8NFF5 587 aa39.4■■■■□ 3.9
CSNK1E-206ENST00000413574 DDX21Q9NR30 783 aaKnown RBP eCLIP39.4■■■■□ 3.9
CSNK1E-206ENST00000413574 ADRA2BP18089 450 aa39.4■■■■□ 3.9
CSNK1E-206ENST00000413574 CCDC30Q5VVM6 783 aa39.4■■■■□ 3.9
CSNK1E-206ENST00000413574 LRP10Q7Z4F1 713 aa39.4■■■■□ 3.9
CSNK1E-206ENST00000413574 ARXQ96QS3 562 aa39.39■■■■□ 3.9
CSNK1E-206ENST00000413574 DBF4Q9UBU7 674 aaPredicted RBP39.39■■■■□ 3.9
CSNK1E-206ENST00000413574 RFC4P35249 363 aa39.38■■■■□ 3.89
CSNK1E-206ENST00000413574 SRP68Q9UHB9 627 aaKnown RBP39.37■■■■□ 3.89
CSNK1E-206ENST00000413574 TBC1D2BQ9UPU7 963 aa39.37■■■■□ 3.89
CSNK1E-206ENST00000413574 NPM2Q86SE8 214 aaKnown RBP39.35■■■■□ 3.89
CSNK1E-206ENST00000413574 TTLL7Q6ZT98 887 aa39.32■■■■□ 3.89
CSNK1E-206ENST00000413574 DZIP3Q86Y13 1208 aaKnown RBP39.32■■■■□ 3.89
CSNK1E-206ENST00000413574 A0A087WZG4 1122 aa39.32■■■■□ 3.88
CSNK1E-206ENST00000413574 STK31Q9BXU1 1019 aa39.32■■■■□ 3.88
CSNK1E-206ENST00000413574 CHMP4AQ9BY43 222 aa39.32■■■■□ 3.88
CSNK1E-206ENST00000413574 PHAXQ9H814 394 aaKnown RBP39.32■■■■□ 3.88
CSNK1E-206ENST00000413574 ZBTB7AO95365 584 aa39.31■■■■□ 3.88
CSNK1E-206ENST00000413574 AIMP1Q12904 312 aaKnown RBP39.31■■■■□ 3.88
CSNK1E-206ENST00000413574 USP42Q9H9J4 1324 aaKnown RBP39.31■■■■□ 3.88
CSNK1E-206ENST00000413574 USPL1Q5W0Q7 1092 aa39.3■■■■□ 3.88
CSNK1E-206ENST00000413574 COPS6Q7L5N1 327 aa39.3■■■■□ 3.88
CSNK1E-206ENST00000413574 XAGE3Q8WTP9 111 aa39.3■■■■□ 3.88
CSNK1E-206ENST00000413574 NARFQ9UHQ1 456 aa39.3■■■■□ 3.88
CSNK1E-206ENST00000413574 SLC4A2P04920 1241 aa39.29■■■■□ 3.88
CSNK1E-206ENST00000413574 HYPKQ9NX55 129 aa39.29■■■■□ 3.88
CSNK1E-206ENST00000413574 CACNA1FO60840 1977 aa39.29■■■■□ 3.88
CSNK1E-206ENST00000413574 ZPR1O75312 459 aa39.29■■■■□ 3.88
CSNK1E-206ENST00000413574 MSL1Q68DK7 614 aa39.28■■■■□ 3.88
CSNK1E-206ENST00000413574 BCORQ6W2J9 1755 aa39.28■■■■□ 3.88
CSNK1E-206ENST00000413574 SCN7AQ01118 1682 aa39.27■■■■□ 3.88
CSNK1E-206ENST00000413574 CAMTA2O94983 1202 aa39.26■■■■□ 3.88
CSNK1E-206ENST00000413574 GYS1P13807 737 aa39.26■■■■□ 3.88
CSNK1E-206ENST00000413574 G2E3Q7L622 706 aa39.26■■■■□ 3.88
CSNK1E-206ENST00000413574 BCL2L12Q9HB09 334 aa39.25■■■■□ 3.87
CSNK1E-206ENST00000413574 BCL2L13Q9BXK5 485 aa39.25■■■■□ 3.87
CSNK1E-206ENST00000413574 CT47B1P0C2W7 299 aaPredicted RBP39.24■■■■□ 3.87
CSNK1E-206ENST00000413574 SLC16A10Q8TF71 515 aa39.24■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms