RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 HEG1Q9ULI3 1381 aa10.15□□□□□ -0.78
CPSF4-202ENST00000412686 GNPATO15228 680 aa10.15□□□□□ -0.78
CPSF4-202ENST00000412686 PHF14O94880 888 aa10.15□□□□□ -0.78
CPSF4-202ENST00000412686 ZBTB7AO95365 584 aa10.15□□□□□ -0.78
CPSF4-202ENST00000412686 TAF7Q15545 349 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-202ENST00000412686 COL23A1Q86Y22 540 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-202ENST00000412686 AK7Q96M32 723 aa10.15□□□□□ -0.78
CPSF4-202ENST00000412686 C4AP0C0L4 1744 aa10.14□□□□□ -0.79
CPSF4-202ENST00000412686 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-202ENST00000412686 LRP5O75197 1615 aa10.14□□□□□ -0.79
CPSF4-202ENST00000412686 CNTNAP4Q9C0A0 1308 aa10.13□□□□□ -0.79
CPSF4-202ENST00000412686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
CPSF4-202ENST00000412686 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
CPSF4-202ENST00000412686 LMOD3Q0VAK6 560 aa10.13□□□□□ -0.79
CPSF4-202ENST00000412686 INTS5Q6P9B9 1019 aaKnown RBP10.13□□□□□ -0.79
CPSF4-202ENST00000412686 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
CPSF4-202ENST00000412686 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
CPSF4-202ENST00000412686 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
CPSF4-202ENST00000412686 LAMB4A4D0S4 1761 aa10.13□□□□□ -0.79
CPSF4-202ENST00000412686 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
CPSF4-202ENST00000412686 CYP19A1P11511 503 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-202ENST00000412686 PIP4K2AP48426 406 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-202ENST00000412686 KRT24Q2M2I5 525 aa10.12□□□□□ -0.79
CPSF4-202ENST00000412686 TSPYL4Q9UJ04 414 aa10.12□□□□□ -0.79
CPSF4-202ENST00000412686 USP16Q9Y5T5 823 aa10.12□□□□□ -0.79
CPSF4-202ENST00000412686 EIF4A1P60842 406 aaKnown RBP10.11□□□□□ -0.79
CPSF4-202ENST00000412686 MSL1Q68DK7 614 aa10.11□□□□□ -0.79
CPSF4-202ENST00000412686 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
CPSF4-202ENST00000412686 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
CPSF4-202ENST00000412686 COL24A1Q17RW2 1714 aa10.1□□□□□ -0.79
CPSF4-202ENST00000412686 RPS6KA4O75676 772 aa10.1□□□□□ -0.79
CPSF4-202ENST00000412686 A1BGP04217 495 aa10.1□□□□□ -0.79
CPSF4-202ENST00000412686 CANXP27824 592 aaKnown RBP10.1□□□□□ -0.79
CPSF4-202ENST00000412686 SSFA2P28290 1259 aa10.1□□□□□ -0.79
CPSF4-202ENST00000412686 PTGER2P43116 358 aa10.1□□□□□ -0.79
CPSF4-202ENST00000412686 RC3H1Q5TC82 1133 aaKnown RBP10.1□□□□□ -0.79
CPSF4-202ENST00000412686 MTFR1LQ9H019 292 aa10.1□□□□□ -0.79
CPSF4-202ENST00000412686 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
CPSF4-202ENST00000412686 SOS1Q07889 1333 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-202ENST00000412686 CHL1O00533 1208 aa10.09□□□□□ -0.79
CPSF4-202ENST00000412686 GIGYF1O75420 1035 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-202ENST00000412686 SNRPA1P09661 255 aaKnown RBP10.09□□□□□ -0.79
CPSF4-202ENST00000412686 WWC1Q8IX03 1113 aa10.09□□□□□ -0.79
CPSF4-202ENST00000412686 ARHGEF1Q92888 912 aaKnown RBP10.09□□□□□ -0.79
CPSF4-202ENST00000412686 SPON1Q9HCB6 807 aa10.09□□□□□ -0.79
CPSF4-202ENST00000412686 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
CPSF4-202ENST00000412686 SRP68Q9UHB9 627 aaKnown RBP10.09□□□□□ -0.79
CPSF4-202ENST00000412686 STARD3NLO95772 234 aa10.08□□□□□ -0.8
CPSF4-202ENST00000412686 ZNF853P0CG23 659 aa10.08□□□□□ -0.8
CPSF4-202ENST00000412686 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
CPSF4-202ENST00000412686 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
CPSF4-202ENST00000412686 SGIP1Q9BQI5 828 aa10.08□□□□□ -0.8
CPSF4-202ENST00000412686 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-202ENST00000412686 COL15A1P39059 1388 aa10.08□□□□□ -0.8
CPSF4-202ENST00000412686 NBPF26B4DH59 902 aa10.07□□□□□ -0.8
CPSF4-202ENST00000412686 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
CPSF4-202ENST00000412686 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
CPSF4-202ENST00000412686 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
CPSF4-202ENST00000412686 FLAD1Q8NFF5 587 aa10.07□□□□□ -0.8
CPSF4-202ENST00000412686 TSR2Q969E8 191 aaKnown RBP10.07□□□□□ -0.8
CPSF4-202ENST00000412686 SCN7AQ01118 1682 aa10.06□□□□□ -0.8
CPSF4-202ENST00000412686 EIF2S2P20042 333 aaKnown RBP10.06□□□□□ -0.8
CPSF4-202ENST00000412686 HMGB2P26583 209 aaKnown RBP10.06□□□□□ -0.8
CPSF4-202ENST00000412686 RFC4P35249 363 aa10.06□□□□□ -0.8
CPSF4-202ENST00000412686 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
CPSF4-202ENST00000412686 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
CPSF4-202ENST00000412686 NECTIN2Q92692 538 aa10.06□□□□□ -0.8
CPSF4-202ENST00000412686 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-202ENST00000412686 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
CPSF4-202ENST00000412686 BABAM1Q9NWV8 329 aa10.06□□□□□ -0.8
CPSF4-202ENST00000412686 BCORQ6W2J9 1755 aa10.06□□□□□ -0.8
CPSF4-202ENST00000412686 USP42Q9H9J4 1324 aaKnown RBP10.06□□□□□ -0.8
CPSF4-202ENST00000412686 ELL2O00472 640 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-202ENST00000412686 ANXA1P04083 346 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 GYS1P13807 737 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 GNAI1P63096 354 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 FKBP8Q14318 412 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 PROSER3Q2NL68 480 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 USPL1Q5W0Q7 1092 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
CPSF4-202ENST00000412686 MYL6BP14649 208 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-202ENST00000412686 CALD1Q05682 793 aaKnown RBP10.04□□□□□ -0.8
CPSF4-202ENST00000412686 KLHL34Q8N239 644 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 NGEFQ8N5V2 710 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 TSPYL6Q8N831 410 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 C8orf58Q8NAV2 365 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 ARXQ96QS3 562 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-202ENST00000412686 ZNF521Q96K83 1311 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 FANCIQ9NVI1 1328 aa10.04□□□□□ -0.8
CPSF4-202ENST00000412686 MMP10P09238 476 aa10.03□□□□□ -0.8
CPSF4-202ENST00000412686 POLD1P28340 1107 aa10.03□□□□□ -0.8
CPSF4-202ENST00000412686 DUSP27Q5VZP5 1158 aa10.03□□□□□ -0.8
CPSF4-202ENST00000412686 NARFQ9UHQ1 456 aa10.03□□□□□ -0.8
CPSF4-202ENST00000412686 ZPR1O75312 459 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 CAMTA2O94983 1202 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 DDR1Q08345 913 aa10.02□□□□□ -0.81
CPSF4-202ENST00000412686 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms