RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 OSBPL3Q9H4L5 887 aa30.35■■■□□ 2.45
VRK2-202ENST00000412104 NFATC2IPQ8NCF5 419 aa30.35■■■□□ 2.45
VRK2-202ENST00000412104 PRDM11Q9NQV5 511 aa30.35■■■□□ 2.45
VRK2-202ENST00000412104 PARP4Q9UKK3 1724 aaKnown RBP30.35■■■□□ 2.45
VRK2-202ENST00000412104 NBPF7P0C2Y1 421 aaPredicted RBP30.34■■■□□ 2.45
VRK2-202ENST00000412104 SDSP20132 328 aa30.34■■■□□ 2.45
VRK2-202ENST00000412104 SSH3Q8TE77 659 aa30.34■■■□□ 2.45
VRK2-202ENST00000412104 DCAF5Q96JK2 942 aa30.34■■■□□ 2.45
VRK2-202ENST00000412104 HYPKQ9NX55 129 aa30.34■■■□□ 2.45
VRK2-202ENST00000412104 PDE1AP54750 535 aa30.34■■■□□ 2.45
VRK2-202ENST00000412104 SLKQ9H2G2 1235 aaPredicted RBP30.33■■■□□ 2.45
VRK2-202ENST00000412104 MAP3K2Q9Y2U5 619 aa30.33■■■□□ 2.45
VRK2-202ENST00000412104 SALL3Q9BXA9 1300 aa30.32■■■□□ 2.45
VRK2-202ENST00000412104 KSR2Q6VAB6 950 aa30.32■■■□□ 2.44
VRK2-202ENST00000412104 WDR17Q8IZU2 1322 aa30.32■■■□□ 2.44
VRK2-202ENST00000412104 TUBGCP6Q96RT7 1819 aa30.32■■■□□ 2.44
VRK2-202ENST00000412104 EIF5BO60841 1220 aaKnown RBP30.32■■■□□ 2.44
VRK2-202ENST00000412104 DDX21Q9NR30 783 aaKnown RBP eCLIP30.32■■■□□ 2.44
VRK2-202ENST00000412104 COL5A2P05997 1499 aaPredicted RBP30.31■■■□□ 2.44
VRK2-202ENST00000412104 POLA2Q14181 598 aa30.31■■■□□ 2.44
VRK2-202ENST00000412104 PPP1R42Q7Z4L9 355 aa30.31■■■□□ 2.44
VRK2-202ENST00000412104 NHSL1Q5SYE7 1610 aa30.31■■■□□ 2.44
VRK2-202ENST00000412104 ANTXR1Q9H6X2 564 aa30.3■■■□□ 2.44
VRK2-202ENST00000412104 HSP90AB1P08238 724 aaKnown RBP30.3■■■□□ 2.44
VRK2-202ENST00000412104 PDIA6Q15084 440 aa30.29■■■□□ 2.44
VRK2-202ENST00000412104 KIF2CQ99661 725 aa30.29■■■□□ 2.44
VRK2-202ENST00000412104 ALDH1L1O75891 902 aa30.28■■■□□ 2.44
VRK2-202ENST00000412104 HSCBQ8IWL3 235 aa30.28■■■□□ 2.44
VRK2-202ENST00000412104 ZNF496Q96IT1 587 aaPredicted RBP30.27■■■□□ 2.44
VRK2-202ENST00000412104 MX1P20591 662 aa30.26■■■□□ 2.44
VRK2-202ENST00000412104 SRGAP3O43295 1099 aa30.26■■■□□ 2.43
VRK2-202ENST00000412104 CASC1Q6TDU7 716 aa30.26■■■□□ 2.43
VRK2-202ENST00000412104 TOM1L2Q6ZVM7 507 aa30.26■■■□□ 2.43
VRK2-202ENST00000412104 SNX21Q969T3 373 aa30.26■■■□□ 2.43
VRK2-202ENST00000412104 DDX58O95786 925 aaKnown RBP30.25■■■□□ 2.43
VRK2-202ENST00000412104 TTC5Q8N0Z6 440 aa30.24■■■□□ 2.43
VRK2-202ENST00000412104 RAB11FIP3O75154 756 aa30.24■■■□□ 2.43
VRK2-202ENST00000412104 TSHZ3Q63HK5 1081 aa30.24■■■□□ 2.43
VRK2-202ENST00000412104 SURF6O75683 361 aaKnown RBP30.23■■■□□ 2.43
VRK2-202ENST00000412104 DEKP35659 375 aaKnown RBP30.23■■■□□ 2.43
VRK2-202ENST00000412104 GLI3P10071 1580 aa30.22■■■□□ 2.43
VRK2-202ENST00000412104 AIMP1Q12904 312 aaKnown RBP30.22■■■□□ 2.43
VRK2-202ENST00000412104 CWF19L2Q2TBE0 894 aaKnown RBP30.22■■■□□ 2.43
VRK2-202ENST00000412104 PCDH11XQ9BZA7 1347 aa30.22■■■□□ 2.43
VRK2-202ENST00000412104 PCDH11YQ9BZA8 1340 aa30.22■■■□□ 2.43
VRK2-202ENST00000412104 CABP4P57796 275 aa30.22■■■□□ 2.43
VRK2-202ENST00000412104 C9orf78Q9NZ63 289 aaPredicted RBP30.22■■■□□ 2.43
VRK2-202ENST00000412104 SNRPA1P09661 255 aaKnown RBP30.21■■■□□ 2.43
VRK2-202ENST00000412104 SPRYD3Q8NCJ5 442 aa30.21■■■□□ 2.43
VRK2-202ENST00000412104 LINS1Q8NG48 757 aa30.21■■■□□ 2.43
VRK2-202ENST00000412104 STAP2Q9UGK3 403 aa30.21■■■□□ 2.43
VRK2-202ENST00000412104 LAMB4A4D0S4 1761 aa30.21■■■□□ 2.43
VRK2-202ENST00000412104 FRAT2O75474 233 aaPredicted RBP30.2■■■□□ 2.43
VRK2-202ENST00000412104 FMNL2Q96PY5 1086 aa30.2■■■□□ 2.43
VRK2-202ENST00000412104 MTX1Q13505 466 aa30.2■■■□□ 2.42
VRK2-202ENST00000412104 IL1RAPL2Q9NP60 686 aa30.2■■■□□ 2.42
VRK2-202ENST00000412104 ZCRB1Q8TBF4 217 aaKnown RBP30.19■■■□□ 2.42
VRK2-202ENST00000412104 USP26Q9BXU7 913 aa30.19■■■□□ 2.42
VRK2-202ENST00000412104 MYL6BP14649 208 aa30.18■■■□□ 2.42
VRK2-202ENST00000412104 RHPN1Q8TCX5 695 aa30.18■■■□□ 2.42
VRK2-202ENST00000412104 SHANK3Q9BYB0 1731 aa30.18■■■□□ 2.42
VRK2-202ENST00000412104 AOX1Q06278 1338 aa30.18■■■□□ 2.42
VRK2-202ENST00000412104 CARD10Q9BWT7 1032 aa30.17■■■□□ 2.42
VRK2-202ENST00000412104 USP16Q9Y5T5 823 aa30.17■■■□□ 2.42
VRK2-202ENST00000412104 RIC3Q7Z5B4 369 aa30.16■■■□□ 2.42
VRK2-202ENST00000412104 XAGE3Q8WTP9 111 aa30.16■■■□□ 2.42
VRK2-202ENST00000412104 KIF1BPQ96EK5 621 aa30.16■■■□□ 2.42
VRK2-202ENST00000412104 HDAC5Q9UQL6 1122 aa30.16■■■□□ 2.42
VRK2-202ENST00000412104 UTYO14607 1347 aa30.16■■■□□ 2.42
VRK2-202ENST00000412104 GRM8O00222 908 aa30.15■■■□□ 2.42
VRK2-202ENST00000412104 IL2RBP14784 551 aa30.14■■■□□ 2.42
VRK2-202ENST00000412104 HSP90AB4PQ58FF6 505 aa30.14■■■□□ 2.42
VRK2-202ENST00000412104 LARP1Q6PKG0 1096 aaKnown RBP30.14■■■□□ 2.42
VRK2-202ENST00000412104 LRP10Q7Z4F1 713 aa30.14■■■□□ 2.42
VRK2-202ENST00000412104 ERC2O15083 957 aa30.14■■■□□ 2.41
VRK2-202ENST00000412104 REC8O95072 547 aa30.14■■■□□ 2.41
VRK2-202ENST00000412104 COPS6Q7L5N1 327 aa30.14■■■□□ 2.41
VRK2-202ENST00000412104 RBM42Q9BTD8 480 aaKnown RBP30.14■■■□□ 2.41
VRK2-202ENST00000412104 UBR2Q8IWV8 1755 aa30.13■■■□□ 2.41
VRK2-202ENST00000412104 NUTM1Q86Y26 1132 aa30.13■■■□□ 2.41
VRK2-202ENST00000412104 STRN4Q9NRL3 753 aa30.13■■■□□ 2.41
VRK2-202ENST00000412104 IGKV5-2P06315 115 aa30.12■■■□□ 2.41
VRK2-202ENST00000412104 PAPPAQ13219 1627 aa30.12■■■□□ 2.41
VRK2-202ENST00000412104 CD2BP2O95400 341 aaKnown RBP30.12■■■□□ 2.41
VRK2-202ENST00000412104 SUCLG2Q96I99 432 aa30.11■■■□□ 2.41
VRK2-202ENST00000412104 NEXNQ0ZGT2 675 aa30.1■■■□□ 2.41
VRK2-202ENST00000412104 TRIM6-TRIM34B2RNG4 842 aa30.1■■■□□ 2.41
VRK2-202ENST00000412104 ERVV-2B6SEH9 535 aa30.1■■■□□ 2.41
VRK2-202ENST00000412104 NKX1-1Q15270 411 aaPredicted RBP30.1■■■□□ 2.41
VRK2-202ENST00000412104 METTL22Q9BUU2 404 aaPredicted RBP30.1■■■□□ 2.41
VRK2-202ENST00000412104 ARFGEF2Q9Y6D5 1785 aa30.09■■■□□ 2.41
VRK2-202ENST00000412104 PIP4K2AP48426 406 aaPredicted RBP30.09■■■□□ 2.41
VRK2-202ENST00000412104 EVA1CP58658 441 aa30.09■■■□□ 2.41
VRK2-202ENST00000412104 RABEP1Q15276 862 aa30.09■■■□□ 2.41
VRK2-202ENST00000412104 KAZALD1Q96I82 304 aa30.09■■■□□ 2.41
VRK2-202ENST00000412104 CHMP5Q9NZZ3 219 aa30.09■■■□□ 2.41
VRK2-202ENST00000412104 NEURL1BA8MQ27 555 aa30.08■■■□□ 2.41
VRK2-202ENST00000412104 RILPL2Q969X0 211 aa30.08■■■□□ 2.41
VRK2-202ENST00000412104 OS9Q13438 667 aaPredicted RBP30.08■■■□□ 2.41
VRK2-202ENST00000412104 AK9Q5TCS8 1911 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms