RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 SLC4A10Q6U841 1118 aa22.9■■□□□ 1.26
CXXC1-202ENST00000412036 LRP10Q7Z4F1 713 aa22.89■■□□□ 1.26
CXXC1-202ENST00000412036 TTC5Q8N0Z6 440 aa22.89■■□□□ 1.26
CXXC1-202ENST00000412036 AFF2P51816 1311 aa22.88■■□□□ 1.25
CXXC1-202ENST00000412036 FMNL2Q96PY5 1086 aa22.88■■□□□ 1.25
CXXC1-202ENST00000412036 MEIS3Q99687 375 aa22.88■■□□□ 1.25
CXXC1-202ENST00000412036 ATG3Q9NT62 314 aa22.88■■□□□ 1.25
CXXC1-202ENST00000412036 TMOD3Q9NYL9 352 aa22.88■■□□□ 1.25
CXXC1-202ENST00000412036 ADCY9O60503 1353 aa22.88■■□□□ 1.25
CXXC1-202ENST00000412036 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.87■■□□□ 1.25
CXXC1-202ENST00000412036 BCL9O00512 1426 aa22.87■■□□□ 1.25
CXXC1-202ENST00000412036 SNRPA1P09661 255 aaKnown RBP22.87■■□□□ 1.25
CXXC1-202ENST00000412036 PRIM1P49642 420 aaKnown RBP22.87■■□□□ 1.25
CXXC1-202ENST00000412036 SIRT2Q8IXJ6 389 aa22.87■■□□□ 1.25
CXXC1-202ENST00000412036 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
CXXC1-202ENST00000412036 SLC4A9Q96Q91 983 aa22.87■■□□□ 1.25
CXXC1-202ENST00000412036 TSHZ2Q9NRE2 1034 aa22.86■■□□□ 1.25
CXXC1-202ENST00000412036 DBF4Q9UBU7 674 aaPredicted RBP22.86■■□□□ 1.25
CXXC1-202ENST00000412036 MEX3CQ5U5Q3 659 aaKnown RBP22.85■■□□□ 1.25
CXXC1-202ENST00000412036 CENPQQ7L2Z9 268 aaPredicted RBP22.85■■□□□ 1.25
CXXC1-202ENST00000412036 PI4KAP2A4QPH2 592 aa22.85■■□□□ 1.25
CXXC1-202ENST00000412036 MYL6BP14649 208 aa22.85■■□□□ 1.25
CXXC1-202ENST00000412036 PI4KAP1Q8N8J0 262 aa22.85■■□□□ 1.25
CXXC1-202ENST00000412036 SYTL4Q96C24 671 aaPredicted RBP22.85■■□□□ 1.25
CXXC1-202ENST00000412036 CDCA7Q9BWT1 371 aaPredicted RBP22.85■■□□□ 1.25
CXXC1-202ENST00000412036 PTF1AQ7RTS3 328 aa22.84■■□□□ 1.25
CXXC1-202ENST00000412036 NBPF26B4DH59 902 aa22.84■■□□□ 1.25
CXXC1-202ENST00000412036 FAM182BQ5T319 152 aa22.84■■□□□ 1.25
CXXC1-202ENST00000412036 NBPF14Q5TI25 921 aa22.84■■□□□ 1.25
CXXC1-202ENST00000412036 NBPF10Q6P3W6 841 aaKnown RBP22.84■■□□□ 1.25
CXXC1-202ENST00000412036 NBPF15Q8N660 670 aa22.84■■□□□ 1.25
CXXC1-202ENST00000412036 LAMB4A4D0S4 1761 aa22.83■■□□□ 1.25
CXXC1-202ENST00000412036 KCNQ2O43526 872 aa22.83■■□□□ 1.25
CXXC1-202ENST00000412036 DDX21Q9NR30 783 aaKnown RBP eCLIP22.83■■□□□ 1.25
CXXC1-202ENST00000412036 THSD7AQ9UPZ6 1657 aa22.82■■□□□ 1.24
CXXC1-202ENST00000412036 AIMP1Q12904 312 aaKnown RBP22.82■■□□□ 1.24
CXXC1-202ENST00000412036 N4BP2Q86UW6 1770 aaPredicted RBP22.81■■□□□ 1.24
CXXC1-202ENST00000412036 ATP10DQ9P241 1426 aa22.81■■□□□ 1.24
CXXC1-202ENST00000412036 A1BGP04217 495 aa22.81■■□□□ 1.24
CXXC1-202ENST00000412036 AAMPQ13685 434 aa22.8■■□□□ 1.24
CXXC1-202ENST00000412036 GJD4Q96KN9 370 aaPredicted RBP22.79■■□□□ 1.24
CXXC1-202ENST00000412036 ATRNO75882 1429 aa22.79■■□□□ 1.24
CXXC1-202ENST00000412036 XAGE3Q8WTP9 111 aa22.79■■□□□ 1.24
CXXC1-202ENST00000412036 BEND3Q5T5X7 828 aa22.78■■□□□ 1.24
CXXC1-202ENST00000412036 DNAJC10Q8IXB1 793 aa22.78■■□□□ 1.24
CXXC1-202ENST00000412036 MAP3K2Q9Y2U5 619 aa22.78■■□□□ 1.24
CXXC1-202ENST00000412036 COPS6Q7L5N1 327 aa22.78■■□□□ 1.24
CXXC1-202ENST00000412036 CCT4P50991 539 aaKnown RBP22.77■■□□□ 1.24
CXXC1-202ENST00000412036 HDAC1Q13547 482 aaPredicted RBP22.77■■□□□ 1.24
CXXC1-202ENST00000412036 DNAAF4Q8WXU2 420 aa22.77■■□□□ 1.24
CXXC1-202ENST00000412036 USP44Q9H0E7 712 aa22.77■■□□□ 1.24
CXXC1-202ENST00000412036 HYPKQ9NX55 129 aa22.77■■□□□ 1.24
CXXC1-202ENST00000412036 A0A0G2JS52 829 aa22.77■■□□□ 1.23
CXXC1-202ENST00000412036 RBM42Q9BTD8 480 aaKnown RBP22.77■■□□□ 1.23
CXXC1-202ENST00000412036 PXDNLA1KZ92 1463 aa22.76■■□□□ 1.23
CXXC1-202ENST00000412036 MYT1Q01538 1121 aa22.76■■□□□ 1.23
CXXC1-202ENST00000412036 CWF19L2Q2TBE0 894 aaKnown RBP22.75■■□□□ 1.23
CXXC1-202ENST00000412036 KSR2Q6VAB6 950 aa22.74■■□□□ 1.23
CXXC1-202ENST00000412036 RWDD1Q9H446 243 aaPredicted RBP22.74■■□□□ 1.23
CXXC1-202ENST00000412036 TJP1Q07157 1748 aa22.73■■□□□ 1.23
CXXC1-202ENST00000412036 NBPF7P0C2Y1 421 aaPredicted RBP22.73■■□□□ 1.23
CXXC1-202ENST00000412036 CEP85Q6P2H3 762 aa22.73■■□□□ 1.23
CXXC1-202ENST00000412036 TTLL7Q6ZT98 887 aa22.73■■□□□ 1.23
CXXC1-202ENST00000412036 PDZRN3Q9UPQ7 1066 aa22.73■■□□□ 1.23
CXXC1-202ENST00000412036 IGKV5-2P06315 115 aa22.72■■□□□ 1.23
CXXC1-202ENST00000412036 RGS3P49796 1198 aa22.71■■□□□ 1.23
CXXC1-202ENST00000412036 QTRT2Q9H974 415 aaKnown RBP22.71■■□□□ 1.23
CXXC1-202ENST00000412036 SMC5Q8IY18 1101 aa22.71■■□□□ 1.23
CXXC1-202ENST00000412036 SRCIN1Q9C0H9 1055 aa22.71■■□□□ 1.23
CXXC1-202ENST00000412036 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.22
CXXC1-202ENST00000412036 ONECUT3O60422 494 aaPredicted RBP22.7■■□□□ 1.22
CXXC1-202ENST00000412036 ARFGEF2Q9Y6D5 1785 aa22.69■■□□□ 1.22
CXXC1-202ENST00000412036 KCNQ4P56696 695 aa22.69■■□□□ 1.22
CXXC1-202ENST00000412036 ANKRD44Q8N8A2 993 aa22.69■■□□□ 1.22
CXXC1-202ENST00000412036 CHMP4AQ9BY43 222 aa22.69■■□□□ 1.22
CXXC1-202ENST00000412036 LRRFIP2Q9Y608 721 aaKnown RBP22.69■■□□□ 1.22
CXXC1-202ENST00000412036 CYP19A1P11511 503 aaPredicted RBP22.68■■□□□ 1.22
CXXC1-202ENST00000412036 PDE4AP27815 886 aa22.68■■□□□ 1.22
CXXC1-202ENST00000412036 SEPT12Q8IYM1 358 aa22.68■■□□□ 1.22
CXXC1-202ENST00000412036 VSIG10Q8N0Z9 540 aa22.68■■□□□ 1.22
CXXC1-202ENST00000412036 ITPK1Q13572 414 aa22.68■■□□□ 1.22
CXXC1-202ENST00000412036 PNMA6EA0A0J9YXQ4 647 aa22.67■■□□□ 1.22
CXXC1-202ENST00000412036 ANKRD13DQ6ZTN6 518 aa22.67■■□□□ 1.22
CXXC1-202ENST00000412036 RIC3Q7Z5B4 369 aa22.67■■□□□ 1.22
CXXC1-202ENST00000412036 NUP188Q5SRE5 1749 aa22.66■■□□□ 1.22
CXXC1-202ENST00000412036 MYD88Q99836 296 aa22.66■■□□□ 1.22
CXXC1-202ENST00000412036 ZBTB1Q9Y2K1 713 aa22.66■■□□□ 1.22
CXXC1-202ENST00000412036 JARID2Q92833 1246 aaPredicted RBP22.65■■□□□ 1.22
CXXC1-202ENST00000412036 MYH14Q7Z406 1995 aaKnown RBP22.65■■□□□ 1.22
CXXC1-202ENST00000412036 ERBB4Q15303 1308 aa22.64■■□□□ 1.22
CXXC1-202ENST00000412036 PALLDQ8WX93 1383 aa22.64■■□□□ 1.22
CXXC1-202ENST00000412036 ATP5J2-PTCD1G3V325 749 aa22.64■■□□□ 1.22
CXXC1-202ENST00000412036 GNAI2P04899 355 aa22.64■■□□□ 1.22
CXXC1-202ENST00000412036 KAZALD1Q96I82 304 aa22.64■■□□□ 1.22
CXXC1-202ENST00000412036 METTL22Q9BUU2 404 aaPredicted RBP22.64■■□□□ 1.22
CXXC1-202ENST00000412036 BRWD3Q6RI45 1802 aa22.64■■□□□ 1.21
CXXC1-202ENST00000412036 CHMP4BQ9H444 224 aaKnown RBP22.64■■□□□ 1.21
CXXC1-202ENST00000412036 ZBTB3Q9H5J0 574 aa22.64■■□□□ 1.21
CXXC1-202ENST00000412036 ZNF330Q9Y3S2 320 aaPredicted RBP22.64■■□□□ 1.21
CXXC1-202ENST00000412036 LOC102724428A0A0B4J2F2 783 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms