RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ZNF496Q96IT1 587 aaPredicted RBP6.98□□□□□ -1.29
EPHA4-202ENST00000409854 CHPF2Q9P2E5 772 aa6.98□□□□□ -1.29
EPHA4-202ENST00000409854 USP35Q9P2H5 1018 aa6.98□□□□□ -1.29
EPHA4-202ENST00000409854 DBF4Q9UBU7 674 aaPredicted RBP6.98□□□□□ -1.29
EPHA4-202ENST00000409854 COL5A3P25940 1745 aaPredicted RBP6.98□□□□□ -1.29
EPHA4-202ENST00000409854 PRAMEF22A3QJZ6 481 aa6.98□□□□□ -1.29
EPHA4-202ENST00000409854 CCT4P50991 539 aaKnown RBP6.98□□□□□ -1.29
EPHA4-202ENST00000409854 FMNL2Q96PY5 1086 aa6.98□□□□□ -1.29
EPHA4-202ENST00000409854 NHSQ6T4R5 1651 aa6.98□□□□□ -1.29
EPHA4-202ENST00000409854 PDIA6Q15084 440 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 VPS72Q15906 364 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 DDX54Q8TDD1 881 aaKnown RBP6.97□□□□□ -1.29
EPHA4-202ENST00000409854 RWDD1Q9H446 243 aaPredicted RBP6.97□□□□□ -1.29
EPHA4-202ENST00000409854 ADCY9O60503 1353 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 SNRPA1P09661 255 aaKnown RBP6.97□□□□□ -1.29
EPHA4-202ENST00000409854 TTC5Q8N0Z6 440 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 NECTIN2Q92692 538 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 PHAXQ9H814 394 aaKnown RBP6.97□□□□□ -1.29
EPHA4-202ENST00000409854 DDX21Q9NR30 783 aaKnown RBP eCLIP6.97□□□□□ -1.29
EPHA4-202ENST00000409854 ANKRD36CQ5JPF3 1778 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 EXOC5O00471 708 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 EIF2S2P20042 333 aaKnown RBP6.97□□□□□ -1.29
EPHA4-202ENST00000409854 FKBP5Q13451 457 aaPredicted RBP6.97□□□□□ -1.29
EPHA4-202ENST00000409854 LRP10Q7Z4F1 713 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 TSHZ2Q9NRE2 1034 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
EPHA4-202ENST00000409854 HSPA1LP34931 641 aa6.96□□□□□ -1.29
EPHA4-202ENST00000409854 HYPKQ9NX55 129 aa6.96□□□□□ -1.29
EPHA4-202ENST00000409854 F6X3S4 739 aa6.96□□□□□ -1.3
EPHA4-202ENST00000409854 SMC5Q8IY18 1101 aa6.96□□□□□ -1.3
EPHA4-202ENST00000409854 BTAF1O14981 1849 aa6.96□□□□□ -1.3
EPHA4-202ENST00000409854 PROSER3Q2NL68 480 aa6.96□□□□□ -1.3
EPHA4-202ENST00000409854 TMOD3Q9NYL9 352 aa6.96□□□□□ -1.3
EPHA4-202ENST00000409854 ATRNO75882 1429 aa6.96□□□□□ -1.3
EPHA4-202ENST00000409854 C8orf37Q96NL8 207 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 TUBGCP6Q96RT7 1819 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 LY75O60449 1722 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 DDB1Q16531 1140 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 SIRT2Q8IXJ6 389 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 VSIG10Q8N0Z9 540 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 PIGBQ92521 554 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 DNAAF4Q8WXU2 420 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 NGLY1Q96IV0 654 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 MEIS3Q99687 375 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 USP16Q9Y5T5 823 aa6.95□□□□□ -1.3
EPHA4-202ENST00000409854 BRWD3Q6RI45 1802 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 ANXA1P04083 346 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 BEND3Q5T5X7 828 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 KSR2Q6VAB6 950 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 ANKRD44Q8N8A2 993 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 MARCH10Q8NA82 808 aaPredicted RBP6.94□□□□□ -1.3
EPHA4-202ENST00000409854 SLC4A10Q6U841 1118 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 RPAP2Q8IXW5 612 aaPredicted RBP6.94□□□□□ -1.3
EPHA4-202ENST00000409854 C1orf115Q9H7X2 142 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 ATG3Q9NT62 314 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 KAT6BQ8WYB5 2073 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 NUP98P52948 1817 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 TAF1LQ8IZX4 1826 aa6.94□□□□□ -1.3
EPHA4-202ENST00000409854 PI4KAP2A4QPH2 592 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 CEP85Q6P2H3 762 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 PI4KAP1Q8N8J0 262 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 USP21Q9UK80 565 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 BCORQ6W2J9 1755 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 ALDH1L1O75891 902 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 GNAI3P08754 354 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 SKAP1Q86WV1 359 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 SRCIN1Q9C0H9 1055 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 PDZRN3Q9UPQ7 1066 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 DDX58O95786 925 aaKnown RBP6.93□□□□□ -1.3
EPHA4-202ENST00000409854 USP44Q9H0E7 712 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 ASAP1Q9ULH1 1129 aa6.93□□□□□ -1.3
EPHA4-202ENST00000409854 NBPF26B4DH59 902 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 NBPF14Q5TI25 921 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 NBPF10Q6P3W6 841 aaKnown RBP6.92□□□□□ -1.3
EPHA4-202ENST00000409854 NBPF15Q8N660 670 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 MAP3K2Q9Y2U5 619 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 UTYO14607 1347 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 MYH14Q7Z406 1995 aaKnown RBP6.92□□□□□ -1.3
EPHA4-202ENST00000409854 GNAI2P04899 355 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 NUCB1Q02818 461 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 TEX13AQ9BXU3 409 aaPredicted RBP6.92□□□□□ -1.3
EPHA4-202ENST00000409854 CCDC9Q9Y3X0 531 aaKnown RBP6.92□□□□□ -1.3
EPHA4-202ENST00000409854 AFF2P51816 1311 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 ONECUT3O60422 494 aaPredicted RBP6.92□□□□□ -1.3
EPHA4-202ENST00000409854 FAM98CQ17RN3 349 aaKnown RBP6.92□□□□□ -1.3
EPHA4-202ENST00000409854 XAGE3Q8WTP9 111 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 DCTPP1Q9H773 170 aa6.92□□□□□ -1.3
EPHA4-202ENST00000409854 LINS1Q8NG48 757 aa6.91□□□□□ -1.3
EPHA4-202ENST00000409854 PODXL2Q9NZ53 605 aa6.91□□□□□ -1.3
EPHA4-202ENST00000409854 COL15A1P39059 1388 aa6.91□□□□□ -1.3
EPHA4-202ENST00000409854 MYH3P11055 1940 aa6.91□□□□□ -1.3
EPHA4-202ENST00000409854 PTCD1O75127 700 aaKnown RBP6.91□□□□□ -1.3
EPHA4-202ENST00000409854 MYL6BP14649 208 aa6.91□□□□□ -1.3
EPHA4-202ENST00000409854 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
EPHA4-202ENST00000409854 COPS6Q7L5N1 327 aa6.91□□□□□ -1.3
EPHA4-202ENST00000409854 SLC4A9Q96Q91 983 aa6.91□□□□□ -1.3
EPHA4-202ENST00000409854 METTL22Q9BUU2 404 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-202ENST00000409854 GJD4Q96KN9 370 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-202ENST00000409854 LAMB2P55268 1798 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms