RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 FKBP8Q14318 412 aa26.05■■□□□ 1.76
TSPAN4-209ENST00000409543 PLEKHF1Q96S99 279 aa26.05■■□□□ 1.76
TSPAN4-209ENST00000409543 PNNQ9H307 717 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-209ENST00000409543 KIF13BQ9NQT8 1826 aa26.04■■□□□ 1.76
TSPAN4-209ENST00000409543 COL15A1P39059 1388 aa26.04■■□□□ 1.76
TSPAN4-209ENST00000409543 KCNQ3O43525 872 aa26.03■■□□□ 1.76
TSPAN4-209ENST00000409543 DCTN1Q14203 1278 aa26.03■■□□□ 1.76
TSPAN4-209ENST00000409543 NARFQ9UHQ1 456 aa26.03■■□□□ 1.76
TSPAN4-209ENST00000409543 C10orf71Q711Q0 1435 aa26.03■■□□□ 1.76
TSPAN4-209ENST00000409543 CANXP27824 592 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-209ENST00000409543 TGFB2P61812 414 aa26.02■■□□□ 1.76
TSPAN4-209ENST00000409543 USPL1Q5W0Q7 1092 aa26.02■■□□□ 1.76
TSPAN4-209ENST00000409543 EIF5P55010 431 aaKnown RBP26.01■■□□□ 1.75
TSPAN4-209ENST00000409543 MYBBP1AQ9BQG0 1328 aaKnown RBP26■■□□□ 1.75
TSPAN4-209ENST00000409543 TM4SF1P30408 202 aa26■■□□□ 1.75
TSPAN4-209ENST00000409543 DDR1Q08345 913 aa25.99■■□□□ 1.75
TSPAN4-209ENST00000409543 NFE2L2Q16236 605 aa25.99■■□□□ 1.75
TSPAN4-209ENST00000409543 ZNF784Q8NCA9 323 aaPredicted RBP25.99■■□□□ 1.75
TSPAN4-209ENST00000409543 PXDNLA1KZ92 1463 aa25.98■■□□□ 1.75
TSPAN4-209ENST00000409543 A0A087WZG4 1122 aa25.98■■□□□ 1.75
TSPAN4-209ENST00000409543 ZEB1P37275 1124 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-209ENST00000409543 TAF7Q15545 349 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-209ENST00000409543 MAPK8IP3Q9UPT6 1336 aa25.97■■□□□ 1.75
TSPAN4-209ENST00000409543 KIAA1551Q9HCM1 1747 aa25.97■■□□□ 1.75
TSPAN4-209ENST00000409543 DLG5Q8TDM6 1919 aa25.96■■□□□ 1.75
TSPAN4-209ENST00000409543 POLRMTO00411 1230 aaKnown RBP25.96■■□□□ 1.75
TSPAN4-209ENST00000409543 BCL2L12Q9HB09 334 aa25.96■■□□□ 1.75
TSPAN4-209ENST00000409543 A0A0G2JLW4 131 aa25.95■■□□□ 1.74
TSPAN4-209ENST00000409543 SNRPA1P09661 255 aaKnown RBP25.95■■□□□ 1.74
TSPAN4-209ENST00000409543 IL6STP40189 918 aaPredicted RBP25.95■■□□□ 1.74
TSPAN4-209ENST00000409543 WWC3Q9ULE0 1092 aa25.95■■□□□ 1.74
TSPAN4-209ENST00000409543 A1BGP04217 495 aa25.94■■□□□ 1.74
TSPAN4-209ENST00000409543 NFIXQ14938 502 aa25.94■■□□□ 1.74
TSPAN4-209ENST00000409543 USP16Q9Y5T5 823 aa25.94■■□□□ 1.74
TSPAN4-209ENST00000409543 N4BP2Q86UW6 1770 aaPredicted RBP25.93■■□□□ 1.74
TSPAN4-209ENST00000409543 DPEP1P16444 411 aa25.93■■□□□ 1.74
TSPAN4-209ENST00000409543 PNISRQ8TF01 805 aaKnown RBP25.92■■□□□ 1.74
TSPAN4-209ENST00000409543 MIS18AQ9NYP9 233 aa25.91■■□□□ 1.74
TSPAN4-209ENST00000409543 PRAMEF22A3QJZ6 481 aa25.9■■□□□ 1.74
TSPAN4-209ENST00000409543 NPM2Q86SE8 214 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-209ENST00000409543 PRKRIP1Q9H875 184 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-209ENST00000409543 ZNF330Q9Y3S2 320 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-209ENST00000409543 KCNA3P22001 575 aa25.89■■□□□ 1.74
TSPAN4-209ENST00000409543 TBC1D2BQ9UPU7 963 aa25.89■■□□□ 1.74
TSPAN4-209ENST00000409543 THUMPD2Q9BTF0 503 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-209ENST00000409543 BCS1LQ9Y276 419 aa25.88■■□□□ 1.73
TSPAN4-209ENST00000409543 SERPINB2P05120 415 aa25.87■■□□□ 1.73
TSPAN4-209ENST00000409543 NRXN2Q9P2S2 1712 aa25.87■■□□□ 1.73
TSPAN4-209ENST00000409543 AFDNP55196 1824 aaKnown RBP25.86■■□□□ 1.73
TSPAN4-209ENST00000409543 RIPK4P57078 832 aa25.86■■□□□ 1.73
TSPAN4-209ENST00000409543 PIM2Q9P1W9 311 aa25.86■■□□□ 1.73
TSPAN4-209ENST00000409543 SCN7AQ01118 1682 aa25.86■■□□□ 1.73
TSPAN4-209ENST00000409543 BRCA1P38398 1863 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-209ENST00000409543 KDM3BQ7LBC6 1761 aa25.85■■□□□ 1.73
TSPAN4-209ENST00000409543 TMPOP42166 694 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-209ENST00000409543 TBC1D9BQ66K14 1250 aa25.85■■□□□ 1.73
TSPAN4-209ENST00000409543 CAMTA2O94983 1202 aa25.84■■□□□ 1.73
TSPAN4-209ENST00000409543 PIP4K2AP48426 406 aaPredicted RBP25.84■■□□□ 1.73
TSPAN4-209ENST00000409543 WDR43Q15061 677 aaKnown RBP eCLIP25.84■■□□□ 1.73
TSPAN4-209ENST00000409543 BICDL1Q6ZP65 573 aa25.84■■□□□ 1.73
TSPAN4-209ENST00000409543 DZIP3Q86Y13 1208 aaKnown RBP25.84■■□□□ 1.73
TSPAN4-209ENST00000409543 EIF4A1P60842 406 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-209ENST00000409543 NBPF26B4DH59 902 aa25.82■■□□□ 1.72
TSPAN4-209ENST00000409543 GIGYF1O75420 1035 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-209ENST00000409543 CHRNA5P30532 468 aa25.82■■□□□ 1.72
TSPAN4-209ENST00000409543 LMOD3Q0VAK6 560 aa25.82■■□□□ 1.72
TSPAN4-209ENST00000409543 NBPF10Q6P3W6 841 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-209ENST00000409543 NBPF15Q8N660 670 aa25.82■■□□□ 1.72
TSPAN4-209ENST00000409543 CCDC146Q8IYE0 955 aa25.81■■□□□ 1.72
TSPAN4-209ENST00000409543 DALRD3Q5D0E6 543 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-209ENST00000409543 RUNDC1Q96C34 613 aa25.8■■□□□ 1.72
TSPAN4-209ENST00000409543 ADAMTS8Q9UP79 889 aa25.8■■□□□ 1.72
TSPAN4-209ENST00000409543 CARMIL3Q8ND23 1372 aa25.8■■□□□ 1.72
TSPAN4-209ENST00000409543 LAMB4A4D0S4 1761 aa25.79■■□□□ 1.72
TSPAN4-209ENST00000409543 SETDB2Q96T68 719 aa25.79■■□□□ 1.72
TSPAN4-209ENST00000409543 ADCY9O60503 1353 aa25.79■■□□□ 1.72
TSPAN4-209ENST00000409543 BCORQ6W2J9 1755 aa25.79■■□□□ 1.72
TSPAN4-209ENST00000409543 CLEC4GQ6UXB4 293 aa25.78■■□□□ 1.72
TSPAN4-209ENST00000409543 ARHGAP27Q6ZUM4 889 aa25.78■■□□□ 1.72
TSPAN4-209ENST00000409543 BABAM1Q9NWV8 329 aa25.78■■□□□ 1.72
TSPAN4-209ENST00000409543 TSPYL4Q9UJ04 414 aa25.78■■□□□ 1.72
TSPAN4-209ENST00000409543 ARFGEF1Q9Y6D6 1849 aa25.78■■□□□ 1.72
TSPAN4-209ENST00000409543 RGL2O15211 777 aa25.77■■□□□ 1.72
TSPAN4-209ENST00000409543 RRP7AQ9Y3A4 280 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-209ENST00000409543 ATP10DQ9P241 1426 aa25.77■■□□□ 1.72
TSPAN4-209ENST00000409543 ZNF652Q9Y2D9 606 aa25.76■■□□□ 1.71
TSPAN4-209ENST00000409543 NEUROD2Q15784 382 aa25.75■■□□□ 1.71
TSPAN4-209ENST00000409543 PRR5LQ6MZQ0 368 aa25.75■■□□□ 1.71
TSPAN4-209ENST00000409543 BRIP1Q9BX63 1249 aa25.75■■□□□ 1.71
TSPAN4-209ENST00000409543 C2CD5Q86YS7 1000 aa25.74■■□□□ 1.71
TSPAN4-209ENST00000409543 H0YIN7 160 aa25.73■■□□□ 1.71
TSPAN4-209ENST00000409543 PDZRN3Q9UPQ7 1066 aa25.73■■□□□ 1.71
TSPAN4-209ENST00000409543 DLEC1Q9Y238 1755 aa25.72■■□□□ 1.71
TSPAN4-209ENST00000409543 PDE6BP35913 854 aa25.72■■□□□ 1.71
TSPAN4-209ENST00000409543 CNBD1Q8NA66 436 aa25.72■■□□□ 1.71
TSPAN4-209ENST00000409543 TRIM35Q9UPQ4 493 aa25.72■■□□□ 1.71
TSPAN4-209ENST00000409543 ANKRD31Q8N7Z5 1873 aa25.7■■□□□ 1.71
TSPAN4-209ENST00000409543 TTLL6Q8N841 843 aa25.7■■□□□ 1.7
TSPAN4-209ENST00000409543 ERBB4Q15303 1308 aa25.69■■□□□ 1.7
TSPAN4-209ENST00000409543 ZNF316A6NFI3 1004 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms