RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ZNF687Q8N1G0 1237 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 GCC1Q96CN9 775 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 SPG7Q9UQ90 795 aa7.89□□□□□ -1.15
GTF3C3-202ENST00000409364 MARF1Q9Y4F3 1742 aaKnown RBP7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 CPDO75976 1380 aa7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 PLEKHG2Q9H7P9 1386 aa7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 BTBD11A6QL63 1104 aa7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 EIF4A1P60842 406 aaKnown RBP7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 MPRIPQ6WCQ1 1025 aa7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 RPAP2Q8IXW5 612 aaPredicted RBP7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 CABLES1Q8TDN4 633 aa7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 PHRF1Q9P1Y6 1649 aaKnown RBP7.88□□□□□ -1.15
GTF3C3-202ENST00000409364 NUCB1Q02818 461 aa7.87□□□□□ -1.15
GTF3C3-202ENST00000409364 C8orf34Q49A92 452 aa7.87□□□□□ -1.15
GTF3C3-202ENST00000409364 IPO9Q96P70 1041 aaKnown RBP7.87□□□□□ -1.15
GTF3C3-202ENST00000409364 DLG5Q8TDM6 1919 aa7.87□□□□□ -1.15
GTF3C3-202ENST00000409364 TRPM3Q9HCF6 1732 aaPredicted RBP7.87□□□□□ -1.15
GTF3C3-202ENST00000409364 PXDNQ92626 1479 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 XIRP1Q702N8 1843 aaKnown RBP7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 FLIIQ13045 1269 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 HDGFL1Q5TGJ6 251 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 HSP90AB1P08238 724 aaKnown RBP7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 CHRNA2Q15822 529 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 VARS2Q5ST30 1063 aaKnown RBP7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 G2E3Q7L622 706 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 CHD1LQ86WJ1 897 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 IFNL2Q8IZJ0 200 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 PRDM11Q9NQV5 511 aa7.86□□□□□ -1.15
GTF3C3-202ENST00000409364 LTBP4Q8N2S1 1624 aa7.85□□□□□ -1.15
GTF3C3-202ENST00000409364 OVOS2A0A0G2JMS6 1433 aa7.85□□□□□ -1.15
GTF3C3-202ENST00000409364 FKBP5Q13451 457 aaPredicted RBP7.85□□□□□ -1.15
GTF3C3-202ENST00000409364 SLC4A10Q6U841 1118 aa7.85□□□□□ -1.15
GTF3C3-202ENST00000409364 ANKRD44Q8N8A2 993 aa7.85□□□□□ -1.15
GTF3C3-202ENST00000409364 DCTPP1Q9H773 170 aa7.85□□□□□ -1.15
GTF3C3-202ENST00000409364 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 HMMRO75330 724 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 GNAI3P08754 354 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 PHKG2P15735 406 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 EIF2S2P20042 333 aaKnown RBP7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 ANKRD45Q5TZF3 282 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 SIRT2Q8IXJ6 389 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 DCAF5Q96JK2 942 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 C1orf115Q9H7X2 142 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 ZBTB47Q9UFB7 747 aaPredicted RBP7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 ALS2Q96Q42 1657 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 LTN1O94822 1766 aa7.84□□□□□ -1.15
GTF3C3-202ENST00000409364 ABCC6O95255 1503 aa7.84□□□□□ -1.16
GTF3C3-202ENST00000409364 F6X3S4 739 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 GIGYF1O75420 1035 aaPredicted RBP7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 NPM2Q86SE8 214 aaKnown RBP7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 IFNL1Q8IU54 200 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 SLC52A2Q9HAB3 445 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 DBF4Q9UBU7 674 aaPredicted RBP7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 RGS12O14924 1447 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 KCNQ3O43525 872 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 GNAI2P04899 355 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 EVA1CP58658 441 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 CEP85Q6P2H3 762 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 TOM1L2Q6ZVM7 507 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 MEIS3Q99687 375 aa7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 UPF2Q9HAU5 1272 aaKnown RBP7.83□□□□□ -1.16
GTF3C3-202ENST00000409364 WDR17Q8IZU2 1322 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 HEG1Q9ULI3 1381 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 RIMBP2O15034 1052 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 ZNF790Q6PG37 636 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 NFATC2IPQ8NCF5 419 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 ZCRB1Q8TBF4 217 aaKnown RBP7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 CARD10Q9BWT7 1032 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 LNPKQ9C0E8 428 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 HYPKQ9NX55 129 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 HDAC5Q9UQL6 1122 aa7.82□□□□□ -1.16
GTF3C3-202ENST00000409364 RASEFQ8IZ41 740 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 PHAXQ9H814 394 aaKnown RBP7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 CHPF2Q9P2E5 772 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 NOP58Q9Y2X3 529 aaKnown RBP7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 LRRC37A3O60309 1634 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 CYP27B1O15528 508 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 EIF5BO60841 1220 aaKnown RBP7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 HOXB3P14651 431 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 CABP4P57796 275 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 ATP8B2P98198 1209 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 BMP2KLQ5H9B9 411 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 ANKRD13DQ6ZTN6 518 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 DNAAF4Q8WXU2 420 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 SRCIN1Q9C0H9 1055 aa7.81□□□□□ -1.16
GTF3C3-202ENST00000409364 PI4KAP2A4QPH2 592 aa7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 ERVV-2B6SEH9 535 aa7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 DDX58O95786 925 aaKnown RBP7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 SNRPA1P09661 255 aaKnown RBP7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 IL2RBP14784 551 aa7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 TTC5Q8N0Z6 440 aa7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 PI4KAP1Q8N8J0 262 aa7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 USP44Q9H0E7 712 aa7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 DDX21Q9NR30 783 aaKnown RBP eCLIP7.8□□□□□ -1.16
GTF3C3-202ENST00000409364 ALDH1L1O75891 902 aa7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 UBTFL1P0CB47 393 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-202ENST00000409364 NKX1-1Q15270 411 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms